RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
TNFAIP3-209ENST00000619035 MYL6BP14649 208 aa15.91■□□□□ 0.14
TNFAIP3-209ENST00000619035 AIMP1Q12904 312 aaKnown RBP15.9■□□□□ 0.14
TNFAIP3-209ENST00000619035 CEP85Q6P2H3 762 aa15.9■□□□□ 0.14
TNFAIP3-209ENST00000619035 DNAAF4Q8WXU2 420 aa15.9■□□□□ 0.14
TNFAIP3-209ENST00000619035 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
TNFAIP3-209ENST00000619035 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
TNFAIP3-209ENST00000619035 N4BP2Q86UW6 1770 aaPredicted RBP15.9■□□□□ 0.14
TNFAIP3-209ENST00000619035 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 LNPKQ9C0E8 428 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 SRCIN1Q9C0H9 1055 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 DDX21Q9NR30 783 aaKnown RBP eCLIP15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 USP16Q9Y5T5 823 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 LRP6O75581 1613 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 PIP4K2AP48426 406 aaPredicted RBP15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 ANKRD45Q5TZF3 282 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 ANKRD44Q8N8A2 993 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 ADCY9O60503 1353 aa15.89■□□□□ 0.13
TNFAIP3-209ENST00000619035 PTCD1O75127 700 aaKnown RBP15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 GNAI2P04899 355 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 GNAI3P08754 354 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 NUCB1Q02818 461 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 RPAP2Q8IXW5 612 aaPredicted RBP15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 TMOD3Q9NYL9 352 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 EXOC5O00471 708 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 SEC24BO95487 1268 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 PDIA6Q15084 440 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 MAP3K2Q9Y2U5 619 aa15.88■□□□□ 0.13
TNFAIP3-209ENST00000619035 BARGINQ6ZT62 677 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 CHD1LQ86WJ1 897 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 PAPPAQ13219 1627 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 TOGARAM1Q9Y4F4 1720 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 C8orf37Q96NL8 207 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 UBR2Q8IWV8 1755 aa15.87■□□□□ 0.13
TNFAIP3-209ENST00000619035 TNS2Q63HR2 1409 aa15.86■□□□□ 0.13
TNFAIP3-209ENST00000619035 UBTFL1P0CB47 393 aaPredicted RBP15.86■□□□□ 0.13
TNFAIP3-209ENST00000619035 BEND3Q5T5X7 828 aa15.86■□□□□ 0.13
TNFAIP3-209ENST00000619035 KSR2Q6VAB6 950 aa15.86■□□□□ 0.13
TNFAIP3-209ENST00000619035 USP44Q9H0E7 712 aa15.86■□□□□ 0.13
TNFAIP3-209ENST00000619035 DDX58O95786 925 aaKnown RBP15.85■□□□□ 0.13
TNFAIP3-209ENST00000619035 APBB1O00213 710 aa15.85■□□□□ 0.13
TNFAIP3-209ENST00000619035 UNC5CLQ8IV45 518 aa15.85■□□□□ 0.13
TNFAIP3-209ENST00000619035 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
TNFAIP3-209ENST00000619035 ERBB4Q15303 1308 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 XAGE3Q8WTP9 111 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 SYTL4Q96C24 671 aaPredicted RBP15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 GLI3P10071 1580 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 LAMB4A4D0S4 1761 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 HMMRO75330 724 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 COPS6Q7L5N1 327 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 FNBP4Q8N3X1 1017 aaPredicted RBP15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 PIGBQ92521 554 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 NGLY1Q96IV0 654 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 DCTPP1Q9H773 170 aa15.84■□□□□ 0.13
TNFAIP3-209ENST00000619035 KCPQ6ZWJ8 1503 aa15.83■□□□□ 0.13
TNFAIP3-209ENST00000619035 SLC4A3P48751 1232 aa15.83■□□□□ 0.13
TNFAIP3-209ENST00000619035 RIC3Q7Z5B4 369 aa15.83■□□□□ 0.13
TNFAIP3-209ENST00000619035 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.83■□□□□ 0.12
TNFAIP3-209ENST00000619035 A0A0G2JS52 829 aa15.83■□□□□ 0.12
TNFAIP3-209ENST00000619035 DDB1Q16531 1140 aa15.83■□□□□ 0.12
TNFAIP3-209ENST00000619035 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
TNFAIP3-209ENST00000619035 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.12
TNFAIP3-209ENST00000619035 NBPF7P0C2Y1 421 aaPredicted RBP15.82■□□□□ 0.12
TNFAIP3-209ENST00000619035 VPS72Q15906 364 aa15.82■□□□□ 0.12
TNFAIP3-209ENST00000619035 IBTKQ9P2D0 1353 aaPredicted RBP15.82■□□□□ 0.12
TNFAIP3-209ENST00000619035 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
TNFAIP3-209ENST00000619035 ITGB4P16144 1822 aa15.81■□□□□ 0.12
TNFAIP3-209ENST00000619035 PNMA6EA0A0J9YXQ4 647 aa15.81■□□□□ 0.12
TNFAIP3-209ENST00000619035 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
TNFAIP3-209ENST00000619035 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
TNFAIP3-209ENST00000619035 C9orf78Q9NZ63 289 aaPredicted RBP15.8■□□□□ 0.12
TNFAIP3-209ENST00000619035 TEX13AQ9BXU3 409 aaPredicted RBP15.8■□□□□ 0.12
TNFAIP3-209ENST00000619035 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
TNFAIP3-209ENST00000619035 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 A1BGP04217 495 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 ANKRD13DQ6ZTN6 518 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 LRP10Q7Z4F1 713 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 LINS1Q8NG48 757 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 SMARCA5O60264 1052 aaPredicted RBP15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 ATP8B2P98198 1209 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 NEXNQ0ZGT2 675 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 EXOC6BQ9Y2D4 811 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 BCL9O00512 1426 aa15.79■□□□□ 0.12
TNFAIP3-209ENST00000619035 NBPF26B4DH59 902 aa15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 NBR1Q14596 966 aa15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 FAM98CQ17RN3 349 aaKnown RBP15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 NBPF14Q5TI25 921 aa15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 NBPF10Q6P3W6 841 aaKnown RBP15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 NBPF15Q8N660 670 aa15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 MYD88Q99836 296 aa15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 HDAC5Q9UQL6 1122 aa15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 ZNF330Q9Y3S2 320 aaPredicted RBP15.78■□□□□ 0.12
TNFAIP3-209ENST00000619035 MYT1Q01538 1121 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms