RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 NCLP19338 710 aaKnown RBP23.51■■□□□ 1.35
PCDHGB3-202ENST00000618934 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
PCDHGB3-202ENST00000618934 SRGAP3O43295 1099 aa23.5■■□□□ 1.35
PCDHGB3-202ENST00000618934 ZNF530Q6P9A1 599 aaPredicted RBP23.5■■□□□ 1.35
PCDHGB3-202ENST00000618934 ERBB4Q15303 1308 aa23.5■■□□□ 1.35
PCDHGB3-202ENST00000618934 PRPF40AO75400 957 aaKnown RBP23.5■■□□□ 1.35
PCDHGB3-202ENST00000618934 CAVIN1Q6NZI2 390 aaKnown RBP23.5■■□□□ 1.35
PCDHGB3-202ENST00000618934 RHPN1Q8TCX5 695 aa23.5■■□□□ 1.35
PCDHGB3-202ENST00000618934 UPF3BQ9BZI7 483 aaKnown RBP23.49■■□□□ 1.35
PCDHGB3-202ENST00000618934 PI4K2BQ8TCG2 481 aa23.49■■□□□ 1.35
PCDHGB3-202ENST00000618934 DNAAF4Q8WXU2 420 aa23.49■■□□□ 1.35
PCDHGB3-202ENST00000618934 KDM3BQ7LBC6 1761 aa23.48■■□□□ 1.35
PCDHGB3-202ENST00000618934 BTBD11A6QL63 1104 aa23.48■■□□□ 1.35
PCDHGB3-202ENST00000618934 ANKLE2Q86XL3 938 aa23.48■■□□□ 1.35
PCDHGB3-202ENST00000618934 GPT2Q8TD30 523 aa23.48■■□□□ 1.35
PCDHGB3-202ENST00000618934 ORAI2Q96SN7 254 aa23.48■■□□□ 1.35
PCDHGB3-202ENST00000618934 ADCY9O60503 1353 aa23.47■■□□□ 1.35
PCDHGB3-202ENST00000618934 PRAMEF22A3QJZ6 481 aa23.47■■□□□ 1.35
PCDHGB3-202ENST00000618934 RBM27Q9P2N5 1060 aaKnown RBP23.47■■□□□ 1.35
PCDHGB3-202ENST00000618934 TEFQ10587 303 aa23.47■■□□□ 1.35
PCDHGB3-202ENST00000618934 PROSER3Q2NL68 480 aa23.47■■□□□ 1.35
PCDHGB3-202ENST00000618934 PXDNQ92626 1479 aa23.46■■□□□ 1.35
PCDHGB3-202ENST00000618934 NSFL1CQ9UNZ2 370 aaKnown RBP23.46■■□□□ 1.35
PCDHGB3-202ENST00000618934 RAB11FIP3O75154 756 aa23.45■■□□□ 1.35
PCDHGB3-202ENST00000618934 AKAP4Q5JQC9 854 aa23.45■■□□□ 1.35
PCDHGB3-202ENST00000618934 CUL4AQ13619 759 aa23.45■■□□□ 1.34
PCDHGB3-202ENST00000618934 ZSCAN23Q3MJ62 389 aa23.45■■□□□ 1.34
PCDHGB3-202ENST00000618934 AOX1Q06278 1338 aa23.44■■□□□ 1.34
PCDHGB3-202ENST00000618934 MCCP23508 829 aa23.44■■□□□ 1.34
PCDHGB3-202ENST00000618934 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
PCDHGB3-202ENST00000618934 GCP02774 474 aa23.43■■□□□ 1.34
PCDHGB3-202ENST00000618934 ANAPC15P60006 121 aa23.43■■□□□ 1.34
PCDHGB3-202ENST00000618934 CLCN1P35523 988 aa23.43■■□□□ 1.34
PCDHGB3-202ENST00000618934 KCNH5Q8NCM2 988 aa23.43■■□□□ 1.34
PCDHGB3-202ENST00000618934 LMO7Q8WWI1 1683 aa23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 HOXB7P09629 217 aa23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 LMOD2Q6P5Q4 547 aa23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 KIF1BPQ96EK5 621 aa23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 NASPP49321 788 aaPredicted RBP23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 ZNF445P59923 1031 aa23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 ARHGEF25Q86VW2 580 aa23.42■■□□□ 1.34
PCDHGB3-202ENST00000618934 ADGRL3Q9HAR2 1447 aa23.41■■□□□ 1.34
PCDHGB3-202ENST00000618934 HSPA4P34932 840 aa23.41■■□□□ 1.34
PCDHGB3-202ENST00000618934 IL17RAQ96F46 866 aa23.41■■□□□ 1.34
PCDHGB3-202ENST00000618934 MAP3K2Q9Y2U5 619 aa23.41■■□□□ 1.34
PCDHGB3-202ENST00000618934 ESPNB1AK53 854 aa23.4■■□□□ 1.34
PCDHGB3-202ENST00000618934 BRD1O95696 1058 aa23.4■■□□□ 1.34
PCDHGB3-202ENST00000618934 MCM2P49736 904 aa23.4■■□□□ 1.34
PCDHGB3-202ENST00000618934 SGSM2O43147 1006 aa23.39■■□□□ 1.34
PCDHGB3-202ENST00000618934 GIGYF1O75420 1035 aaPredicted RBP23.39■■□□□ 1.34
PCDHGB3-202ENST00000618934 CWF19L2Q2TBE0 894 aaKnown RBP23.39■■□□□ 1.34
PCDHGB3-202ENST00000618934 ANKRD24Q8TF21 1146 aa23.39■■□□□ 1.34
PCDHGB3-202ENST00000618934 PA2G4Q9UQ80 394 aaKnown RBP23.39■■□□□ 1.34
PCDHGB3-202ENST00000618934 LARP6Q9BRS8 491 aaKnown RBP23.39■■□□□ 1.33
PCDHGB3-202ENST00000618934 TMEM63CQ9P1W3 806 aa23.39■■□□□ 1.33
PCDHGB3-202ENST00000618934 TRHP20396 242 aaPredicted RBP23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 FOXD4L6Q3SYB3 417 aaPredicted RBP23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 FOXD4L3Q6VB84 417 aaPredicted RBP23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 RASEFQ8IZ41 740 aa23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 RBSNQ9H1K0 784 aa23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 LSG1Q9H089 658 aaKnown RBP23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 DBF4Q9UBU7 674 aaPredicted RBP23.38■■□□□ 1.33
PCDHGB3-202ENST00000618934 C1orf141Q5JVX7 400 aa23.37■■□□□ 1.33
PCDHGB3-202ENST00000618934 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
PCDHGB3-202ENST00000618934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.37■■□□□ 1.33
PCDHGB3-202ENST00000618934 CWC27Q6UX04 472 aaKnown RBP23.37■■□□□ 1.33
PCDHGB3-202ENST00000618934 SNX14Q9Y5W7 946 aa23.36■■□□□ 1.33
PCDHGB3-202ENST00000618934 OS9Q13438 667 aaPredicted RBP23.35■■□□□ 1.33
PCDHGB3-202ENST00000618934 AMOTQ4VCS5 1084 aa23.35■■□□□ 1.33
PCDHGB3-202ENST00000618934 TRIM44Q96DX7 344 aaPredicted RBP23.35■■□□□ 1.33
PCDHGB3-202ENST00000618934 INTS4Q96HW7 963 aaKnown RBP23.35■■□□□ 1.33
PCDHGB3-202ENST00000618934 RAD50Q92878 1312 aa23.35■■□□□ 1.33
PCDHGB3-202ENST00000618934 PHRF1Q9P1Y6 1649 aaKnown RBP23.35■■□□□ 1.33
PCDHGB3-202ENST00000618934 PPP1R9BQ96SB3 815 aa23.35■■□□□ 1.33
PCDHGB3-202ENST00000618934 C9orf78Q9NZ63 289 aaPredicted RBP23.34■■□□□ 1.33
PCDHGB3-202ENST00000618934 CNTROBQ8N137 903 aa23.34■■□□□ 1.33
PCDHGB3-202ENST00000618934 HEG1Q9ULI3 1381 aa23.34■■□□□ 1.33
PCDHGB3-202ENST00000618934 DTNBO60941 627 aa23.33■■□□□ 1.33
PCDHGB3-202ENST00000618934 CPA1P15085 419 aa23.33■■□□□ 1.33
PCDHGB3-202ENST00000618934 KSR2Q6VAB6 950 aa23.33■■□□□ 1.33
PCDHGB3-202ENST00000618934 MTX1Q13505 466 aa23.33■■□□□ 1.33
PCDHGB3-202ENST00000618934 NCAPD2Q15021 1401 aa23.32■■□□□ 1.32
PCDHGB3-202ENST00000618934 CCDC173Q0VFZ6 552 aa23.32■■□□□ 1.32
PCDHGB3-202ENST00000618934 AIMP1Q12904 312 aaKnown RBP23.32■■□□□ 1.32
PCDHGB3-202ENST00000618934 KAZALD1Q96I82 304 aa23.32■■□□□ 1.32
PCDHGB3-202ENST00000618934 GDPD2Q9HCC8 539 aa23.32■■□□□ 1.32
PCDHGB3-202ENST00000618934 USP42Q9H9J4 1324 aaKnown RBP23.32■■□□□ 1.32
PCDHGB3-202ENST00000618934 TCHHQ07283 1943 aa23.32■■□□□ 1.32
PCDHGB3-202ENST00000618934 RGPD5Q99666 1765 aa23.31■■□□□ 1.32
PCDHGB3-202ENST00000618934 SYCE3A1L190 88 aa23.31■■□□□ 1.32
PCDHGB3-202ENST00000618934 TTC14Q96N46 770 aa23.31■■□□□ 1.32
PCDHGB3-202ENST00000618934 PTH1RQ03431 593 aa23.31■■□□□ 1.32
PCDHGB3-202ENST00000618934 SLC39A6Q13433 755 aa23.31■■□□□ 1.32
PCDHGB3-202ENST00000618934 SUCLG2Q96I99 432 aa23.3■■□□□ 1.32
PCDHGB3-202ENST00000618934 SLIT3O75094 1523 aa23.3■■□□□ 1.32
PCDHGB3-202ENST00000618934 ALDH1L1O75891 902 aa23.3■■□□□ 1.32
PCDHGB3-202ENST00000618934 AK2P54819 239 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms