RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 FYB1O15117 783 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 C2orf69Q8N8R5 385 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 CDK5RAP3Q96JB5 506 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 CLTCL1P53675 1640 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 SULF1Q8IWU6 871 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 SSH2Q76I76 1423 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 RALYLQ86SE5 291 aaKnown RBP4.02□□□□□ -1.77
LPP-220ENST00000617246 HOOK1Q9UJC3 728 aaKnown RBP4.02□□□□□ -1.77
LPP-220ENST00000617246 SMCR8Q8TEV9 937 aaPredicted RBP4.02□□□□□ -1.77
LPP-220ENST00000617246 TPRNQ4KMQ1 711 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 DCAF15Q66K64 600 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 FAM177BA6PVY3 158 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 HSPA2P54652 639 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 CCDC129Q6ZRS4 1044 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 TMEM131LA2VDJ0 1609 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
LPP-220ENST00000617246 DIP2CQ9Y2E4 1556 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 AMOTQ4VCS5 1084 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 RAB23Q9ULC3 237 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 PPLO60437 1756 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 MROH7-TTC4A0A0A0MT08 1334 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 MROH7Q68CQ1 1323 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 LTBP4Q8N2S1 1624 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 ZNF569Q5MCW4 686 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 DDX60Q8IY21 1712 aaKnown RBP4.02□□□□□ -1.77
LPP-220ENST00000617246 NR2E3Q9Y5X4 410 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 MAP3K5Q99683 1374 aa4.02□□□□□ -1.77
LPP-220ENST00000617246 NR1I2O75469 434 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 LDHCP07864 332 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 PPP2R5DQ14738 602 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 RWDD1Q9H446 243 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 ATP2B2Q01814 1243 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 VEZTQ9HBM0 779 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 MYH7P12883 1935 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 TPM1P09493 284 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 U2AF1L5P0DN76 240 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 U2AF1Q01081 240 aaKnown RBP eCLIP4.01□□□□□ -1.77
LPP-220ENST00000617246 ARHGEF12Q9NZN5 1544 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 A0A0U1RQG5 324 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 USP5P45974 858 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 SPTY2D1Q68D10 685 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 GTPBP6O43824 516 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 SLC26A8Q96RN1 970 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 KCNH4Q9UQ05 1017 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 KIF28PB7ZC32 967 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 ANKRD20A12PQ8NF67 263 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 CCNL1Q9UK58 526 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 NFXL1Q6ZNB6 911 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 KNDC1Q76NI1 1749 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 C6orf229H3BNL8 230 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 WASLO00401 505 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 THRAP3Q9Y2W1 955 aaKnown RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 TTC39AQ5SRH9 613 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 RUFY4Q6ZNE9 571 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 NGEFQ8N5V2 710 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 SETDB2Q96T68 719 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 NBPF6Q5VWK0 638 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 NBPF5PQ86XG9 351 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 NBPF4Q96M43 638 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 NCKAP5LQ9HCH0 1330 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 SHPRHQ149N8 1683 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 AFF2P51816 1311 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 PTCH1Q13635 1447 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 APPP05067 770 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 PDILTQ8N807 584 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 ATP6V1AP38606 617 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 PPP1R12BO60237 982 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 FMNL1O95466 1100 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 IBSPP21815 317 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 TPD52L1Q16890 204 aaPredicted RBP4.01□□□□□ -1.77
LPP-220ENST00000617246 CCDC57Q2TAC2 916 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 IFNL2Q8IZJ0 200 aa4.01□□□□□ -1.77
LPP-220ENST00000617246 BAG3O95817 575 aa4□□□□□ -1.77
LPP-220ENST00000617246 PTPRTO14522 1441 aa4□□□□□ -1.77
LPP-220ENST00000617246 ANKRD13DQ6ZTN6 518 aa4□□□□□ -1.77
LPP-220ENST00000617246 RGS22Q8NE09 1264 aa4□□□□□ -1.77
LPP-220ENST00000617246 EVA1BQ9NVM1 165 aa4□□□□□ -1.77
LPP-220ENST00000617246 MYH1P12882 1939 aa4□□□□□ -1.77
LPP-220ENST00000617246 TTC21BQ7Z4L5 1316 aa4□□□□□ -1.77
LPP-220ENST00000617246 G3BP2Q9UN86 482 aaKnown RBP4□□□□□ -1.77
LPP-220ENST00000617246 PICK1Q9NRD5 415 aa4□□□□□ -1.77
LPP-220ENST00000617246 RGPD3A6NKT7 1758 aaPredicted RBP4□□□□□ -1.77
LPP-220ENST00000617246 MAP2P11137 1827 aaKnown RBP4□□□□□ -1.77
LPP-220ENST00000617246 TRIM6-TRIM34B2RNG4 842 aa4□□□□□ -1.77
LPP-220ENST00000617246 IL2RBP14784 551 aa4□□□□□ -1.77
LPP-220ENST00000617246 NBPF20Q3BBV1 942 aa4□□□□□ -1.77
LPP-220ENST00000617246 CERS3Q8IU89 383 aa4□□□□□ -1.77
LPP-220ENST00000617246 ABCC5O15440 1437 aa4□□□□□ -1.77
LPP-220ENST00000617246 DIAPH1O60610 1272 aaKnown RBP4□□□□□ -1.77
LPP-220ENST00000617246 PIBF1Q8WXW3 757 aa4□□□□□ -1.77
LPP-220ENST00000617246 ZC3H12CQ9C0D7 883 aaKnown RBP4□□□□□ -1.77
LPP-220ENST00000617246 ZMYM3Q14202 1370 aa4□□□□□ -1.77
LPP-220ENST00000617246 TXLNAP40222 546 aa4□□□□□ -1.77
LPP-220ENST00000617246 NACAP1Q9BZK3 213 aa4□□□□□ -1.77
LPP-220ENST00000617246 SSX2IPQ9Y2D8 614 aa4□□□□□ -1.77
LPP-220ENST00000617246 CCNA1P78396 465 aa4□□□□□ -1.77
LPP-220ENST00000617246 PLCH1Q4KWH8 1693 aa4□□□□□ -1.77
LPP-220ENST00000617246 OSBPP22059 807 aa4□□□□□ -1.77
LPP-220ENST00000617246 NFE2L2Q16236 605 aa4□□□□□ -1.77
LPP-220ENST00000617246 MYD88Q99836 296 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms