RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SMTNL1A8MU46 457 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 KRT85P78386 507 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 ELF2Q15723 593 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 PRPF40BQ6NWY9 871 aaKnown RBP7.93□□□□□ -1.14
LMO3-235ENST00000616247 WAPLQ7Z5K2 1190 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 TIGD1Q96MW7 591 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 FMNL2Q96PY5 1086 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 ZNF215Q9UL58 517 aaPredicted RBP7.93□□□□□ -1.14
LMO3-235ENST00000616247 UHRF1BP1LA0JNW5 1464 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 CFAP74Q9C0B2 1584 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 ASXL2Q76L83 1435 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 COG3Q96JB2 828 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 IL25Q9H293 177 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 PDRG1Q9NUG6 133 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 CTNNA3Q9UI47 895 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 LRRFIP2Q9Y608 721 aaKnown RBP7.92□□□□□ -1.14
LMO3-235ENST00000616247 RTL1A6NKG5 1358 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 IQGAP1P46940 1657 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.92□□□□□ -1.14
LMO3-235ENST00000616247 A0A087WWV3 80 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 NPM1P06748 294 aaKnown RBP eCLIP7.92□□□□□ -1.14
LMO3-235ENST00000616247 ZRSR1Q15695 479 aaKnown RBP7.92□□□□□ -1.14
LMO3-235ENST00000616247 HOMER1Q86YM7 354 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 CERS3Q8IU89 383 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 RASEFQ8IZ41 740 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 ANKRD7Q92527 254 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 SPATA32Q96LK8 384 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 CBX8Q9HC52 389 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 MYOM1P52179 1685 aa7.92□□□□□ -1.14
LMO3-235ENST00000616247 CFAP65Q6ZU64 1925 aaKnown RBP7.92□□□□□ -1.14
LMO3-235ENST00000616247 LARGE1O95461 756 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 IQGAP3Q86VI3 1631 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 ANAPC15P60006 121 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 ZSCAN25Q6NSZ9 544 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 CACTINQ8WUQ7 758 aaKnown RBP7.91□□□□□ -1.14
LMO3-235ENST00000616247 SNX14Q9Y5W7 946 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 UNC13BO14795 1591 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 SBNO2Q9Y2G9 1366 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 SKILP12757 684 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 BRPF1P55201 1214 aaPredicted RBP7.91□□□□□ -1.14
LMO3-235ENST00000616247 GABPB1Q06547 395 aaPredicted RBP7.91□□□□□ -1.14
LMO3-235ENST00000616247 RUFY3Q7L099 469 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 USP16Q9Y5T5 823 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 CLTCL1P53675 1640 aa7.91□□□□□ -1.14
LMO3-235ENST00000616247 RNF17Q9BXT8 1623 aaKnown RBP7.91□□□□□ -1.14
LMO3-235ENST00000616247 CEP152O94986 1710 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 UBTFL1P0CB47 393 aaPredicted RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 EIF2S2P20042 333 aaKnown RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 TTC6Q86TZ1 520 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 FAM177A1Q8N128 213 aaPredicted RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 DDX41Q9UJV9 622 aaKnown RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 PAXBP1Q9Y5B6 917 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 CYP46A1Q9Y6A2 500 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 H3BQV1 296 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 HSP90B1P14625 803 aaKnown RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 ZKSCAN1P17029 563 aaPredicted RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 CCT4P50991 539 aaKnown RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 IRX5P78411 483 aaPredicted RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 GNL2Q13823 731 aaKnown RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 IFFO2Q5TF58 517 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 CCAR2Q8N163 923 aaKnown RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 KIF18AQ8NI77 898 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 DDX11Q96FC9 970 aa7.9□□□□□ -1.14
LMO3-235ENST00000616247 NOL10Q9BSC4 688 aaKnown RBP7.9□□□□□ -1.14
LMO3-235ENST00000616247 NCKAP5LQ9HCH0 1330 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 PTCH1Q13635 1447 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 USP27XA6NNY8 438 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 FOXO3O43524 673 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 HTATSF1O43719 755 aaKnown RBP7.9□□□□□ -1.15
LMO3-235ENST00000616247 GNAI3P08754 354 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 SLFN14P0C7P3 912 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 ZNF75DP51815 510 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 TERF2Q15554 542 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 ZNF397Q8NF99 534 aaPredicted RBP7.9□□□□□ -1.15
LMO3-235ENST00000616247 ERCC4Q92889 916 aaPredicted RBP7.9□□□□□ -1.15
LMO3-235ENST00000616247 MTMR6Q9Y217 621 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 MRVI1Q9Y6F6 885 aa7.9□□□□□ -1.15
LMO3-235ENST00000616247 KMT5BQ4FZB7 885 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 CNTROBQ8N137 903 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 TRPM2O94759 1503 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 PLCH2O75038 1416 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 SRGAP3O43295 1099 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 CTIFO43310 598 aaKnown RBP7.89□□□□□ -1.15
LMO3-235ENST00000616247 ZNF853P0CG23 659 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 HSPA4P34932 840 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 IDI1Q13907 227 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 CDC37L1Q7L3B6 337 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 TMX1Q9H3N1 280 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 CALCOCO1Q9P1Z2 691 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 ZBTB12Q9Y330 459 aaPredicted RBP7.89□□□□□ -1.15
LMO3-235ENST00000616247 CCDC9Q9Y3X0 531 aaKnown RBP7.89□□□□□ -1.15
LMO3-235ENST00000616247 CDC42BPBQ9Y5S2 1711 aa7.89□□□□□ -1.15
LMO3-235ENST00000616247 RAB11FIP3O75154 756 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 IL13P35225 146 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 ERCC6LQ2NKX8 1250 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 CCDC144BQ3MJ40 725 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms