RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 ADAMTSL1Q8N6G6 1762 aa9.78□□□□□ -0.84
MUC1-227ENST00000615517 NCBP3Q53F19 620 aaKnown RBP9.77□□□□□ -0.85
MUC1-227ENST00000615517 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
MUC1-227ENST00000615517 RBM42Q9BTD8 480 aaKnown RBP9.77□□□□□ -0.85
MUC1-227ENST00000615517 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
MUC1-227ENST00000615517 DDNO94850 711 aaPredicted RBP9.76□□□□□ -0.85
MUC1-227ENST00000615517 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
MUC1-227ENST00000615517 PHKG2P15735 406 aa9.76□□□□□ -0.85
MUC1-227ENST00000615517 SPG7Q9UQ90 795 aa9.76□□□□□ -0.85
MUC1-227ENST00000615517 COL11A2P13942 1736 aaPredicted RBP9.76□□□□□ -0.85
MUC1-227ENST00000615517 FLT4P35916 1363 aa9.75□□□□□ -0.85
MUC1-227ENST00000615517 RASSF10A6NK89 507 aa9.75□□□□□ -0.85
MUC1-227ENST00000615517 FYB1O15117 783 aa9.75□□□□□ -0.85
MUC1-227ENST00000615517 TTLL6Q8N841 843 aa9.75□□□□□ -0.85
MUC1-227ENST00000615517 GGNBP2Q9H3C7 697 aa9.75□□□□□ -0.85
MUC1-227ENST00000615517 ANKRD26Q9UPS8 1709 aa9.75□□□□□ -0.85
MUC1-227ENST00000615517 SLX4Q8IY92 1834 aa9.75□□□□□ -0.85
MUC1-227ENST00000615517 TRPM7Q96QT4 1865 aa9.74□□□□□ -0.85
MUC1-227ENST00000615517 LTBP1Q14766 1721 aa9.74□□□□□ -0.85
MUC1-227ENST00000615517 HOXD11P31277 338 aaPredicted RBP9.74□□□□□ -0.85
MUC1-227ENST00000615517 CRKLP46109 303 aaKnown RBP9.74□□□□□ -0.85
MUC1-227ENST00000615517 ERFEQ4G0M1 354 aa9.74□□□□□ -0.85
MUC1-227ENST00000615517 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
MUC1-227ENST00000615517 PUS7Q96PZ0 661 aaKnown RBP9.74□□□□□ -0.85
MUC1-227ENST00000615517 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
MUC1-227ENST00000615517 CARMIL3Q8ND23 1372 aa9.74□□□□□ -0.85
MUC1-227ENST00000615517 TONSLQ96HA7 1378 aa9.74□□□□□ -0.85
MUC1-227ENST00000615517 MAP2K1Q02750 393 aaPredicted RBP9.73□□□□□ -0.85
MUC1-227ENST00000615517 DEFB115Q30KQ5 88 aa9.73□□□□□ -0.85
MUC1-227ENST00000615517 LDHDQ86WU2 507 aa9.73□□□□□ -0.85
MUC1-227ENST00000615517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.73□□□□□ -0.85
MUC1-227ENST00000615517 KIF24Q5T7B8 1368 aa9.73□□□□□ -0.85
MUC1-227ENST00000615517 ARFGEF2Q9Y6D5 1785 aa9.73□□□□□ -0.85
MUC1-227ENST00000615517 NFIXQ14938 502 aa9.72□□□□□ -0.85
MUC1-227ENST00000615517 USPL1Q5W0Q7 1092 aa9.72□□□□□ -0.85
MUC1-227ENST00000615517 C2CD5Q86YS7 1000 aa9.72□□□□□ -0.85
MUC1-227ENST00000615517 EYA1Q99502 592 aa9.72□□□□□ -0.85
MUC1-227ENST00000615517 TAF1DQ9H5J8 278 aaPredicted RBP9.72□□□□□ -0.85
MUC1-227ENST00000615517 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
MUC1-227ENST00000615517 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
MUC1-227ENST00000615517 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.86
MUC1-227ENST00000615517 KCNA4P22459 653 aa9.71□□□□□ -0.86
MUC1-227ENST00000615517 INTS5Q6P9B9 1019 aaKnown RBP9.71□□□□□ -0.86
MUC1-227ENST00000615517 CFAP44Q96MT7 982 aa9.71□□□□□ -0.86
MUC1-227ENST00000615517 MCOLN1Q9GZU1 580 aa9.71□□□□□ -0.86
MUC1-227ENST00000615517 ZNF219Q9P2Y4 722 aaPredicted RBP9.71□□□□□ -0.86
MUC1-227ENST00000615517 TSKSQ9UJT2 592 aa9.71□□□□□ -0.86
MUC1-227ENST00000615517 C21orf2O43822 256 aa9.7□□□□□ -0.86
MUC1-227ENST00000615517 PTCD1O75127 700 aaKnown RBP9.7□□□□□ -0.86
MUC1-227ENST00000615517 SERPINB2P05120 415 aa9.7□□□□□ -0.86
MUC1-227ENST00000615517 L3MBTL3Q96JM7 780 aaPredicted RBP9.7□□□□□ -0.86
MUC1-227ENST00000615517 SIN3AQ96ST3 1273 aa9.7□□□□□ -0.86
MUC1-227ENST00000615517 BCL2L12Q9HB09 334 aa9.7□□□□□ -0.86
MUC1-227ENST00000615517 H0YIN7 160 aa9.69□□□□□ -0.86
MUC1-227ENST00000615517 CARD11Q9BXL7 1154 aa9.69□□□□□ -0.86
MUC1-227ENST00000615517 LTBP3Q9NS15 1303 aa9.69□□□□□ -0.86
MUC1-227ENST00000615517 SCN11AQ9UI33 1791 aa9.69□□□□□ -0.86
MUC1-227ENST00000615517 IQCA1LA6NCM1 817 aa9.68□□□□□ -0.86
MUC1-227ENST00000615517 ZPR1O75312 459 aa9.68□□□□□ -0.86
MUC1-227ENST00000615517 NPM3O75607 178 aaKnown RBP9.68□□□□□ -0.86
MUC1-227ENST00000615517 EAPPQ56P03 285 aaPredicted RBP9.68□□□□□ -0.86
MUC1-227ENST00000615517 MAP1SQ66K74 1059 aaPredicted RBP9.68□□□□□ -0.86
MUC1-227ENST00000615517 TESK2Q96S53 571 aa9.68□□□□□ -0.86
MUC1-227ENST00000615517 SOS1Q07889 1333 aaPredicted RBP9.67□□□□□ -0.86
MUC1-227ENST00000615517 FMR1Q06787 632 aaKnown RBP eCLIP9.67□□□□□ -0.86
MUC1-227ENST00000615517 CYP4F22Q6NT55 531 aa9.67□□□□□ -0.86
MUC1-227ENST00000615517 CNTROBQ8N137 903 aa9.67□□□□□ -0.86
MUC1-227ENST00000615517 CAPNS2Q96L46 248 aa9.67□□□□□ -0.86
MUC1-227ENST00000615517 TAOK3Q9H2K8 898 aa9.67□□□□□ -0.86
MUC1-227ENST00000615517 NARFQ9UHQ1 456 aa9.67□□□□□ -0.86
MUC1-227ENST00000615517 ABT1Q9ULW3 272 aaKnown RBP9.67□□□□□ -0.86
MUC1-227ENST00000615517 CLEC11AQ9Y240 323 aa9.67□□□□□ -0.86
MUC1-227ENST00000615517 WASHC2AQ641Q2 1341 aa9.66□□□□□ -0.86
MUC1-227ENST00000615517 ZNF541Q9H0D2 1346 aa9.66□□□□□ -0.86
MUC1-227ENST00000615517 CABP4P57796 275 aa9.66□□□□□ -0.86
MUC1-227ENST00000615517 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
MUC1-227ENST00000615517 GPR101Q96P66 508 aaPredicted RBP9.66□□□□□ -0.86
MUC1-227ENST00000615517 PPM1GO15355 546 aaPredicted RBP9.65□□□□□ -0.86
MUC1-227ENST00000615517 AOC2O75106 756 aa9.65□□□□□ -0.86
MUC1-227ENST00000615517 EPHX2P34913 555 aa9.65□□□□□ -0.86
MUC1-227ENST00000615517 DNAJC10Q8IXB1 793 aa9.65□□□□□ -0.86
MUC1-227ENST00000615517 CCDC24Q8N4L8 307 aa9.65□□□□□ -0.86
MUC1-227ENST00000615517 BEGAINQ9BUH8 593 aa9.65□□□□□ -0.86
MUC1-227ENST00000615517 DDX21Q9NR30 783 aaKnown RBP eCLIP9.65□□□□□ -0.86
MUC1-227ENST00000615517 HACL1Q9UJ83 578 aa9.65□□□□□ -0.86
MUC1-227ENST00000615517 COL15A1P39059 1388 aa9.64□□□□□ -0.87
MUC1-227ENST00000615517 GRM1Q13255 1194 aa9.64□□□□□ -0.87
MUC1-227ENST00000615517 DGKZQ13574 1117 aa9.64□□□□□ -0.87
MUC1-227ENST00000615517 PRPF38BQ5VTL8 546 aaKnown RBP9.64□□□□□ -0.87
MUC1-227ENST00000615517 NFATC2IPQ8NCF5 419 aa9.64□□□□□ -0.87
MUC1-227ENST00000615517 RNF123Q5XPI4 1314 aa9.63□□□□□ -0.87
MUC1-227ENST00000615517 HSP90AB1P08238 724 aaKnown RBP9.63□□□□□ -0.87
MUC1-227ENST00000615517 CYP19A1P11511 503 aaPredicted RBP9.63□□□□□ -0.87
MUC1-227ENST00000615517 SOX10P56693 466 aa9.63□□□□□ -0.87
MUC1-227ENST00000615517 NEUROD1Q13562 356 aa9.63□□□□□ -0.87
MUC1-227ENST00000615517 CST9Q5W186 159 aa9.63□□□□□ -0.87
MUC1-227ENST00000615517 BICDL1Q6ZP65 573 aa9.63□□□□□ -0.87
MUC1-227ENST00000615517 PAXIP1Q6ZW49 1069 aaPredicted RBP9.63□□□□□ -0.87
MUC1-227ENST00000615517 SCN7AQ01118 1682 aa9.63□□□□□ -0.87
MUC1-227ENST00000615517 ST20-MTHFSA0A0A6YYL1 179 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms