RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 TTC31Q49AM3 519 aaPredicted RBP9.65□□□□□ -0.86
ALMS1-206ENST00000613296 ZNF354CQ86Y25 554 aa9.65□□□□□ -0.86
ALMS1-206ENST00000613296 WDR63Q8IWG1 891 aa9.65□□□□□ -0.86
ALMS1-206ENST00000613296 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
ALMS1-206ENST00000613296 SURF6O75683 361 aaKnown RBP9.65□□□□□ -0.86
ALMS1-206ENST00000613296 PRR16Q569H4 304 aa9.65□□□□□ -0.86
ALMS1-206ENST00000613296 PLVAPQ9BX97 442 aa9.65□□□□□ -0.86
ALMS1-206ENST00000613296 NUF2Q9BZD4 464 aa9.65□□□□□ -0.86
ALMS1-206ENST00000613296 DNAJC21Q5F1R6 531 aaKnown RBP9.65□□□□□ -0.86
ALMS1-206ENST00000613296 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
ALMS1-206ENST00000613296 LUC7L2Q9Y383 392 aaKnown RBP9.65□□□□□ -0.87
ALMS1-206ENST00000613296 DACT3Q96B18 629 aaPredicted RBP9.64□□□□□ -0.87
ALMS1-206ENST00000613296 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 PHAXQ9H814 394 aaKnown RBP9.64□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC144CPQ8IYA2 1237 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 KRT222Q8N1A0 295 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 ZNF853P0CG23 659 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 OPA1O60313 960 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 STRN4Q9NRL3 753 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 SETDB1Q15047 1291 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 RUNDC1Q96C34 613 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
ALMS1-206ENST00000613296 HMGB1P1B2RPK0 211 aaPredicted RBP9.64□□□□□ -0.87
ALMS1-206ENST00000613296 CASTP20810 708 aaKnown RBP9.64□□□□□ -0.87
ALMS1-206ENST00000613296 SIL1Q9H173 461 aa9.63□□□□□ -0.87
ALMS1-206ENST00000613296 ALDH3A1P30838 453 aa9.63□□□□□ -0.87
ALMS1-206ENST00000613296 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
ALMS1-206ENST00000613296 NOP2P46087 812 aaKnown RBP9.63□□□□□ -0.87
ALMS1-206ENST00000613296 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
ALMS1-206ENST00000613296 CRCPO75575 148 aa9.63□□□□□ -0.87
ALMS1-206ENST00000613296 KIF20AO95235 890 aa9.63□□□□□ -0.87
ALMS1-206ENST00000613296 TMEM266Q2M3C6 531 aa9.63□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC12Q8WUD4 166 aaPredicted RBP9.63□□□□□ -0.87
ALMS1-206ENST00000613296 ERCC5P28715 1186 aaPredicted RBP9.63□□□□□ -0.87
ALMS1-206ENST00000613296 GRM1Q13255 1194 aa9.63□□□□□ -0.87
ALMS1-206ENST00000613296 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
ALMS1-206ENST00000613296 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
ALMS1-206ENST00000613296 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.63□□□□□ -0.87
ALMS1-206ENST00000613296 MYO1BO43795 1136 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 DDX27Q96GQ7 796 aaKnown RBP9.62□□□□□ -0.87
ALMS1-206ENST00000613296 ANO10Q9NW15 660 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 SAMD15Q9P1V8 674 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 MPHOSPH8Q99549 860 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC114Q96M63 670 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC18Q5T9S5 1454 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC14Q49A88 953 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 RAB34Q9BZG1 259 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 PPFIA2O75334 1257 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 HMOX1P09601 288 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 KRT13P13646 458 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 LACTBP83111 547 aaPredicted RBP9.62□□□□□ -0.87
ALMS1-206ENST00000613296 NEMFO60524 1076 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 SF3B2Q13435 895 aaKnown RBP9.62□□□□□ -0.87
ALMS1-206ENST00000613296 MICALL1Q8N3F8 863 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 KIAA1524Q8TCG1 905 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 SEPT8Q92599 483 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 ZSCAN25Q6NSZ9 544 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC77Q9BR77 488 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 GSDMDP57764 484 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC183Q5T5S1 534 aa9.62□□□□□ -0.87
ALMS1-206ENST00000613296 SNW1Q13573 536 aaKnown RBP9.62□□□□□ -0.87
ALMS1-206ENST00000613296 IFI16Q16666 785 aaKnown RBP9.62□□□□□ -0.87
ALMS1-206ENST00000613296 ZSCAN29Q8IWY8 852 aaPredicted RBP9.62□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC40Q4G0X9 1142 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 TCERG1LQ5VWI1 586 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC89Q8N998 374 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 PRPF31Q8WWY3 499 aaKnown RBP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 CUL5Q93034 780 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 TRIM7Q9C029 511 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 TRMT1Q9NXH9 659 aaKnown RBP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 ATP11AP98196 1134 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 CCDC30Q5VVM6 783 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 GSTA5Q7RTV2 222 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 FKBP4Q02790 459 aaKnown RBP eCLIP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 BICDL2A1A5D9 508 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 ZSCAN31Q96LW9 406 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 TSNAXIP1Q2TAA8 658 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 CEP85LQ5SZL2 805 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 JAKMIP1Q96N16 626 aaKnown RBP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 VCXQ9H320 206 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 RNF216Q9NWF9 866 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 CEP128Q6ZU80 1094 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 CTNNA3Q9UI47 895 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 NAA16Q6N069 864 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-206ENST00000613296 PPFIBP2Q8ND30 876 aa9.61□□□□□ -0.87
ALMS1-206ENST00000613296 MGEA5O60502 916 aa9.6□□□□□ -0.87
ALMS1-206ENST00000613296 PDIA4P13667 645 aaKnown RBP9.6□□□□□ -0.87
ALMS1-206ENST00000613296 TTC12Q9H892 705 aaPredicted RBP9.6□□□□□ -0.87
ALMS1-206ENST00000613296 CAPN2P17655 700 aa9.6□□□□□ -0.87
ALMS1-206ENST00000613296 TBC1D5Q92609 795 aa9.6□□□□□ -0.87
ALMS1-206ENST00000613296 NBPF1Q3BBV0 1214 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms