RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 TNIP1Q15025 636 aa18.27■□□□□ 0.52
TNXB-208ENST00000611016 SLF2Q8IX21 1173 aa18.27■□□□□ 0.52
TNXB-208ENST00000611016 RFC4P35249 363 aa18.27■□□□□ 0.52
TNXB-208ENST00000611016 CWC25Q9NXE8 425 aaPredicted RBP18.27■□□□□ 0.52
TNXB-208ENST00000611016 ZNF213O14771 459 aa18.27■□□□□ 0.51
TNXB-208ENST00000611016 CTCFLQ8NI51 663 aaPredicted RBP18.27■□□□□ 0.51
TNXB-208ENST00000611016 NUP62CLQ9H1M0 184 aa18.27■□□□□ 0.51
TNXB-208ENST00000611016 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.51
TNXB-208ENST00000611016 LEKR1Q6ZMV7 388 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
TNXB-208ENST00000611016 FAM83GA6ND36 823 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
TNXB-208ENST00000611016 PTPRCP08575 1304 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 EIF3JO75822 258 aaKnown RBP18.26■□□□□ 0.51
TNXB-208ENST00000611016 LDHAL6AQ6ZMR3 332 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
TNXB-208ENST00000611016 DESP17661 470 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
TNXB-208ENST00000611016 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 MPNDQ8N594 471 aa18.26■□□□□ 0.51
TNXB-208ENST00000611016 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
TNXB-208ENST00000611016 WDR78Q5VTH9 848 aa18.25■□□□□ 0.51
TNXB-208ENST00000611016 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.51
TNXB-208ENST00000611016 H0YHG0 523 aa18.25■□□□□ 0.51
TNXB-208ENST00000611016 PPP1R42Q7Z4L9 355 aa18.25■□□□□ 0.51
TNXB-208ENST00000611016 CCDC196A0A1B0GTZ2 297 aa18.25■□□□□ 0.51
TNXB-208ENST00000611016 C20orf194Q5TEA3 1177 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 NSD2O96028 1365 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 SLC12A7Q9Y666 1083 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 CCDC181Q5TID7 509 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 BRPF3Q9ULD4 1205 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 FBLN1P23142 703 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 UBAP1LF5GYI3 381 aa18.24■□□□□ 0.51
TNXB-208ENST00000611016 KIF2AO00139 706 aaPredicted RBP18.24■□□□□ 0.51
TNXB-208ENST00000611016 SNRPA1P09661 255 aaKnown RBP18.24■□□□□ 0.51
TNXB-208ENST00000611016 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
TNXB-208ENST00000611016 JARID2Q92833 1246 aaPredicted RBP18.23■□□□□ 0.51
TNXB-208ENST00000611016 CCDC112Q8NEF3 446 aa18.23■□□□□ 0.51
TNXB-208ENST00000611016 SCLT1Q96NL6 688 aa18.23■□□□□ 0.51
TNXB-208ENST00000611016 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
TNXB-208ENST00000611016 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
TNXB-208ENST00000611016 MAP3K1Q13233 1512 aa18.23■□□□□ 0.51
TNXB-208ENST00000611016 FAM177A1Q8N128 213 aaPredicted RBP18.23■□□□□ 0.51
TNXB-208ENST00000611016 RNF41Q9H4P4 317 aaPredicted RBP18.23■□□□□ 0.51
TNXB-208ENST00000611016 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
TNXB-208ENST00000611016 ACSBG1Q96GR2 724 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 DNAI2Q9GZS0 605 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 GOLIM4O00461 696 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
TNXB-208ENST00000611016 HMGB1P09429 215 aaKnown RBP18.22■□□□□ 0.51
TNXB-208ENST00000611016 CUL5Q93034 780 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 SNRKQ9NRH2 765 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 TOM1O60784 492 aa18.22■□□□□ 0.51
TNXB-208ENST00000611016 TRIM27P14373 513 aa18.21■□□□□ 0.51
TNXB-208ENST00000611016 EIF5P55010 431 aaKnown RBP18.21■□□□□ 0.51
TNXB-208ENST00000611016 ANXA1P04083 346 aa18.21■□□□□ 0.51
TNXB-208ENST00000611016 GUCY1B3Q02153 619 aa18.21■□□□□ 0.51
TNXB-208ENST00000611016 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
TNXB-208ENST00000611016 SH2B1Q9NRF2 756 aaPredicted RBP18.21■□□□□ 0.51
TNXB-208ENST00000611016 C8orf76Q96K31 380 aa18.21■□□□□ 0.51
TNXB-208ENST00000611016 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
TNXB-208ENST00000611016 ST5P78524 1137 aa18.2■□□□□ 0.5
TNXB-208ENST00000611016 NBPF6Q5VWK0 638 aa18.2■□□□□ 0.5
TNXB-208ENST00000611016 NBPF5PQ86XG9 351 aaPredicted RBP18.2■□□□□ 0.5
TNXB-208ENST00000611016 NBPF4Q96M43 638 aa18.2■□□□□ 0.5
TNXB-208ENST00000611016 GRPEL1Q9HAV7 217 aa18.2■□□□□ 0.5
TNXB-208ENST00000611016 GOLGA6L7A0A1B0GV03 622 aa18.2■□□□□ 0.5
TNXB-208ENST00000611016 CAMK4Q16566 473 aa18.2■□□□□ 0.5
TNXB-208ENST00000611016 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
TNXB-208ENST00000611016 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 NEFHP12036 1026 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 AXDND1Q5T1B0 1012 aaPredicted RBP18.19■□□□□ 0.5
TNXB-208ENST00000611016 GOLGA8AA7E2F4 631 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 SSRP1Q08945 709 aaKnown RBP18.19■□□□□ 0.5
TNXB-208ENST00000611016 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
TNXB-208ENST00000611016 LDHCP07864 332 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 TRIM21P19474 475 aaKnown RBP18.19■□□□□ 0.5
TNXB-208ENST00000611016 SLC4A8Q2Y0W8 1093 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 PPP4R3AQ6IN85 833 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 ECHDC1Q9NTX5 307 aa18.19■□□□□ 0.5
TNXB-208ENST00000611016 ANKRD36BQ8N2N9 1353 aa18.18■□□□□ 0.5
TNXB-208ENST00000611016 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
TNXB-208ENST00000611016 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
TNXB-208ENST00000611016 ANKRD13DQ6ZTN6 518 aa18.18■□□□□ 0.5
TNXB-208ENST00000611016 C8orf37Q96NL8 207 aa18.18■□□□□ 0.5
TNXB-208ENST00000611016 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
TNXB-208ENST00000611016 NLRP5P59047 1200 aa18.18■□□□□ 0.5
TNXB-208ENST00000611016 FEZ1Q99689 392 aa18.18■□□□□ 0.5
TNXB-208ENST00000611016 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
TNXB-208ENST00000611016 BAG3O95817 575 aa18.17■□□□□ 0.5
TNXB-208ENST00000611016 MAP3K11Q16584 847 aa18.17■□□□□ 0.5
TNXB-208ENST00000611016 CALRP27797 417 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms