RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
USP6NL-205ENST00000609104 CCDC175P0C221 793 aa15.14■□□□□ 0.01
USP6NL-205ENST00000609104 TMCO5BA8MYB1 307 aa15.14■□□□□ 0.01
USP6NL-205ENST00000609104 ZNF213O14771 459 aa15.14■□□□□ 0.01
USP6NL-205ENST00000609104 BIN1O00499 593 aa15.14■□□□□ 0.01
USP6NL-205ENST00000609104 PRPF4BQ13523 1007 aaKnown RBP15.14■□□□□ 0.01
USP6NL-205ENST00000609104 AKAP2Q9Y2D5 859 aa15.14■□□□□ 0.01
USP6NL-205ENST00000609104 CTNNA2P26232 953 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 NFE2L2Q16236 605 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 IFIT1P09914 478 aaKnown RBP15.13■□□□□ 0.01
USP6NL-205ENST00000609104 FSIP1Q8NA03 581 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 RTEL1-TNFRSF6BF6WH68 1400 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 AFAP1Q8N556 730 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 DNAI2Q9GZS0 605 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 NOP2P46087 812 aaKnown RBP15.13■□□□□ 0.01
USP6NL-205ENST00000609104 SMC1AQ14683 1233 aaKnown RBP15.13■□□□□ 0.01
USP6NL-205ENST00000609104 CCDC144CPQ8IYA2 1237 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
USP6NL-205ENST00000609104 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 RANBP6O60518 1105 aaKnown RBP15.13■□□□□ 0.01
USP6NL-205ENST00000609104 YEATS4O95619 227 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 TNPO1Q92973 898 aaKnown RBP15.13■□□□□ 0.01
USP6NL-205ENST00000609104 TAOK3Q9H2K8 898 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
USP6NL-205ENST00000609104 MTIF2P46199 727 aaKnown RBP15.13■□□□□ 0.01
USP6NL-205ENST00000609104 NLRP5P59047 1200 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 SMARCC1Q92922 1105 aaPredicted RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 NAA15Q9BXJ9 866 aaKnown RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 LMAN1P49257 510 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 PPM1FP49593 454 aaPredicted RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 SNW1Q13573 536 aaKnown RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 SCLT1Q96NL6 688 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 SH2B1Q9NRF2 756 aaPredicted RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 ANKRD30BQ9BXX2 1392 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 PPP4R3AQ6IN85 833 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 MYD88Q99836 296 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 MCM10Q7L590 875 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 FAM107BQ9H098 131 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 CCDC8Q9H0W5 538 aaPredicted RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 PPM1EQ8WY54 764 aa15.12■□□□□ 0.01
USP6NL-205ENST00000609104 RBM27Q9P2N5 1060 aaKnown RBP15.12■□□□□ 0.01
USP6NL-205ENST00000609104 ZNF444Q8N0Y2 327 aaPredicted RBP15.11■□□□□ 0.01
USP6NL-205ENST00000609104 CRACR2BQ8N4Y2 399 aaPredicted RBP15.11■□□□□ 0.01
USP6NL-205ENST00000609104 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 PSMD1Q99460 953 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 SF3B2Q13435 895 aaKnown RBP15.11■□□□□ 0.01
USP6NL-205ENST00000609104 TMEM266Q2M3C6 531 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 CEP135Q66GS9 1140 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 PLEKHH1Q9ULM0 1364 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 NBPF8Q3BBV2 869 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 RAB34Q9BZG1 259 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 STARD3NLO95772 234 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
USP6NL-205ENST00000609104 CFTRP13569 1480 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
USP6NL-205ENST00000609104 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 MAATS1Q7Z4T9 603 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 SERPINA10Q9UK55 444 aa15.11■□□□□ 0.01
USP6NL-205ENST00000609104 STX1AQ16623 288 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 GSDMDP57764 484 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 FERMT2Q96AC1 680 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 FCHSD2O94868 740 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 CTCFLQ8NI51 663 aaPredicted RBP15.1■□□□□ 0.01
USP6NL-205ENST00000609104 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
USP6NL-205ENST00000609104 LIMCH1Q9UPQ0 1083 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 CCDC96Q2M329 555 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
USP6NL-205ENST00000609104 IQCA1Q86XH1 822 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 GOLGA8BA8MQT2 603 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 IFIT3O14879 490 aaKnown RBP15.1■□□□□ 0.01
USP6NL-205ENST00000609104 ALS2CR12Q96Q35 445 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
USP6NL-205ENST00000609104 LIG1P18858 919 aa15.09■□□□□ 0.01
USP6NL-205ENST00000609104 GJB2P29033 226 aa15.09■□□□□ 0.01
USP6NL-205ENST00000609104 DZIP1Q86YF9 867 aaKnown RBP15.09■□□□□ 0.01
USP6NL-205ENST00000609104 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
USP6NL-205ENST00000609104 HOMER2Q9NSB8 354 aa15.09■□□□□ 0.01
USP6NL-205ENST00000609104 ANKIB1Q9P2G1 1089 aa15.09■□□□□ 0.01
USP6NL-205ENST00000609104 TBC1D2Q9BYX2 928 aa15.09■□□□□ 0.01
USP6NL-205ENST00000609104 NKTRP30414 1462 aaKnown RBP15.08■□□□□ 0
USP6NL-205ENST00000609104 GIGYF2Q6Y7W6 1299 aaKnown RBP15.08■□□□□ 0
USP6NL-205ENST00000609104 POTEB2H3BUK9 544 aa15.08■□□□□ 0
USP6NL-205ENST00000609104 PTCD1O75127 700 aaKnown RBP15.08■□□□□ 0
USP6NL-205ENST00000609104 TRMT1LQ7Z2T5 733 aaKnown RBP15.08■□□□□ 0
USP6NL-205ENST00000609104 CATIPQ7Z7H3 387 aa15.08■□□□□ 0
USP6NL-205ENST00000609104 TMOD2Q9NZR1 351 aa15.08■□□□□ 0
USP6NL-205ENST00000609104 A0A087WZG4 1122 aa15.08■□□□□ 0
USP6NL-205ENST00000609104 FSD2A1L4K1 749 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 NEMFO60524 1076 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 PANK2Q9BZ23 570 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 TCERG1LQ5VWI1 586 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms