RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 TRPC5Q9UL62 973 aaPredicted RBP27.83■■■□□ 2.05
USF2-216ENST00000607959 F6X3S4 739 aa27.82■■■□□ 2.04
USF2-216ENST00000607959 DDX19BQ9UMR2 479 aa27.82■■■□□ 2.04
USF2-216ENST00000607959 INTS3Q68E01 1043 aaKnown RBP27.82■■■□□ 2.04
USF2-216ENST00000607959 DBF4Q9UBU7 674 aaPredicted RBP27.82■■■□□ 2.04
USF2-216ENST00000607959 ONECUT3O60422 494 aaPredicted RBP27.81■■■□□ 2.04
USF2-216ENST00000607959 PTCD1O75127 700 aaKnown RBP27.8■■■□□ 2.04
USF2-216ENST00000607959 CHMP4AQ9BY43 222 aa27.8■■■□□ 2.04
USF2-216ENST00000607959 ZBTB40Q9NUA8 1239 aa27.8■■■□□ 2.04
USF2-216ENST00000607959 PCDHB15Q9Y5E8 787 aa27.8■■■□□ 2.04
USF2-216ENST00000607959 ZBTB7BO15156 539 aaPredicted RBP27.79■■■□□ 2.04
USF2-216ENST00000607959 ACSBG1Q96GR2 724 aa27.79■■■□□ 2.04
USF2-216ENST00000607959 QTRT2Q9H974 415 aaKnown RBP27.79■■■□□ 2.04
USF2-216ENST00000607959 FKBP5Q13451 457 aaPredicted RBP27.79■■■□□ 2.04
USF2-216ENST00000607959 LRP10Q7Z4F1 713 aa27.79■■■□□ 2.04
USF2-216ENST00000607959 DDX21Q9NR30 783 aaKnown RBP eCLIP27.79■■■□□ 2.04
USF2-216ENST00000607959 AAMPQ13685 434 aa27.78■■■□□ 2.04
USF2-216ENST00000607959 SYTL4Q96C24 671 aaPredicted RBP27.78■■■□□ 2.04
USF2-216ENST00000607959 KDM2BQ8NHM5 1336 aa27.78■■■□□ 2.04
USF2-216ENST00000607959 SLC4A9Q96Q91 983 aa27.76■■■□□ 2.03
USF2-216ENST00000607959 N4BP2Q86UW6 1770 aaPredicted RBP27.76■■■□□ 2.03
USF2-216ENST00000607959 A0A0G2JS52 829 aa27.75■■■□□ 2.03
USF2-216ENST00000607959 MYT1Q01538 1121 aa27.75■■■□□ 2.03
USF2-216ENST00000607959 KCNQ2O43526 872 aa27.75■■■□□ 2.03
USF2-216ENST00000607959 PIP4K2AP48426 406 aaPredicted RBP27.74■■■□□ 2.03
USF2-216ENST00000607959 HYPKQ9NX55 129 aa27.74■■■□□ 2.03
USF2-216ENST00000607959 ADCY9O60503 1353 aa27.74■■■□□ 2.03
USF2-216ENST00000607959 IGHDP01880 384 aa27.73■■■□□ 2.03
USF2-216ENST00000607959 NBPF26B4DH59 902 aa27.72■■■□□ 2.03
USF2-216ENST00000607959 NBPF14Q5TI25 921 aa27.72■■■□□ 2.03
USF2-216ENST00000607959 NBPF10Q6P3W6 841 aaKnown RBP27.72■■■□□ 2.03
USF2-216ENST00000607959 SLC4A10Q6U841 1118 aa27.72■■■□□ 2.03
USF2-216ENST00000607959 NBPF15Q8N660 670 aa27.72■■■□□ 2.03
USF2-216ENST00000607959 FBXO41Q8TF61 875 aa27.72■■■□□ 2.03
USF2-216ENST00000607959 SEPT12Q8IYM1 358 aa27.71■■■□□ 2.03
USF2-216ENST00000607959 VSIG10Q8N0Z9 540 aa27.71■■■□□ 2.03
USF2-216ENST00000607959 PXDNLA1KZ92 1463 aa27.71■■■□□ 2.03
USF2-216ENST00000607959 MYL6BP14649 208 aa27.71■■■□□ 2.03
USF2-216ENST00000607959 FAM182BQ5T319 152 aa27.71■■■□□ 2.03
USF2-216ENST00000607959 PI4KAP2A4QPH2 592 aa27.7■■■□□ 2.02
USF2-216ENST00000607959 PI4KAP1Q8N8J0 262 aa27.7■■■□□ 2.02
USF2-216ENST00000607959 PTF1AQ7RTS3 328 aa27.69■■■□□ 2.02
USF2-216ENST00000607959 DNAJC10Q8IXB1 793 aa27.69■■■□□ 2.02
USF2-216ENST00000607959 RBM42Q9BTD8 480 aaKnown RBP27.69■■■□□ 2.02
USF2-216ENST00000607959 TJP1Q07157 1748 aa27.69■■■□□ 2.02
USF2-216ENST00000607959 A1BGP04217 495 aa27.69■■■□□ 2.02
USF2-216ENST00000607959 CCT4P50991 539 aaKnown RBP27.69■■■□□ 2.02
USF2-216ENST00000607959 ERBB4Q15303 1308 aa27.67■■■□□ 2.02
USF2-216ENST00000607959 XAGE3Q8WTP9 111 aa27.67■■■□□ 2.02
USF2-216ENST00000607959 DNAAF4Q8WXU2 420 aa27.67■■■□□ 2.02
USF2-216ENST00000607959 MEIS3Q99687 375 aa27.67■■■□□ 2.02
USF2-216ENST00000607959 C1orf115Q9H7X2 142 aa27.67■■■□□ 2.02
USF2-216ENST00000607959 BRWD3Q6RI45 1802 aa27.65■■■□□ 2.02
USF2-216ENST00000607959 AIMP1Q12904 312 aaKnown RBP27.65■■■□□ 2.02
USF2-216ENST00000607959 KSR2Q6VAB6 950 aa27.65■■■□□ 2.02
USF2-216ENST00000607959 COPS6Q7L5N1 327 aa27.65■■■□□ 2.02
USF2-216ENST00000607959 BEND3Q5T5X7 828 aa27.65■■■□□ 2.02
USF2-216ENST00000607959 CENPQQ7L2Z9 268 aaPredicted RBP27.65■■■□□ 2.02
USF2-216ENST00000607959 NHSQ6T4R5 1651 aa27.64■■■□□ 2.02
USF2-216ENST00000607959 SBF2Q86WG5 1849 aa27.64■■■□□ 2.02
USF2-216ENST00000607959 MAP3K2Q9Y2U5 619 aa27.64■■■□□ 2.02
USF2-216ENST00000607959 ATP10DQ9P241 1426 aa27.63■■■□□ 2.01
USF2-216ENST00000607959 ZNF772Q68DY9 489 aaPredicted RBP27.62■■■□□ 2.01
USF2-216ENST00000607959 TEX13AQ9BXU3 409 aaPredicted RBP27.62■■■□□ 2.01
USF2-216ENST00000607959 CHMP4BQ9H444 224 aaKnown RBP27.62■■■□□ 2.01
USF2-216ENST00000607959 CYP19A1P11511 503 aaPredicted RBP27.61■■■□□ 2.01
USF2-216ENST00000607959 CICQ96RK0 1608 aaPredicted RBP27.61■■■□□ 2.01
USF2-216ENST00000607959 PALLDQ8WX93 1383 aa27.61■■■□□ 2.01
USF2-216ENST00000607959 BTAF1O14981 1849 aa27.61■■■□□ 2.01
USF2-216ENST00000607959 SIRT2Q8IXJ6 389 aa27.61■■■□□ 2.01
USF2-216ENST00000607959 HDAC1Q13547 482 aaPredicted RBP27.59■■■□□ 2.01
USF2-216ENST00000607959 SKAP1Q86WV1 359 aa27.59■■■□□ 2.01
USF2-216ENST00000607959 USP44Q9H0E7 712 aa27.59■■■□□ 2.01
USF2-216ENST00000607959 SRCIN1Q9C0H9 1055 aa27.59■■■□□ 2.01
USF2-216ENST00000607959 ARFGEF2Q9Y6D5 1785 aa27.58■■■□□ 2.01
USF2-216ENST00000607959 LOC102724428A0A0B4J2F2 783 aa27.58■■■□□ 2.01
USF2-216ENST00000607959 SIK1P57059 783 aa27.58■■■□□ 2.01
USF2-216ENST00000607959 TTLL7Q6ZT98 887 aa27.58■■■□□ 2.01
USF2-216ENST00000607959 RGS17Q9UGC6 210 aaPredicted RBP27.58■■■□□ 2.01
USF2-216ENST00000607959 DDX58O95786 925 aaKnown RBP27.57■■■□□ 2
USF2-216ENST00000607959 RBM6P78332 1123 aaKnown RBP27.57■■■□□ 2
USF2-216ENST00000607959 NUP188Q5SRE5 1749 aa27.57■■■□□ 2
USF2-216ENST00000607959 STARD3NLO95772 234 aa27.57■■■□□ 2
USF2-216ENST00000607959 ITPK1Q13572 414 aa27.57■■■□□ 2
USF2-216ENST00000607959 ANKRD13DQ6ZTN6 518 aa27.57■■■□□ 2
USF2-216ENST00000607959 RWDD1Q9H446 243 aaPredicted RBP27.56■■■□□ 2
USF2-216ENST00000607959 SMARCC1Q92922 1105 aaPredicted RBP27.55■■■□□ 2
USF2-216ENST00000607959 ZNF831Q5JPB2 1677 aa27.55■■■□□ 2
USF2-216ENST00000607959 EP400Q96L91 3159 aa27.55■■■□□ 2
USF2-216ENST00000607959 IGKV5-2P06315 115 aa27.55■■■□□ 2
USF2-216ENST00000607959 RIC3Q7Z5B4 369 aa27.55■■■□□ 2
USF2-216ENST00000607959 CWF19L2Q2TBE0 894 aaKnown RBP27.54■■■□□ 2
USF2-216ENST00000607959 ATP6V1AP38606 617 aa27.53■■■□□ 2
USF2-216ENST00000607959 METTL22Q9BUU2 404 aaPredicted RBP27.53■■■□□ 2
USF2-216ENST00000607959 ZBTB1Q9Y2K1 713 aa27.53■■■□□ 2
USF2-216ENST00000607959 RREB1Q92766 1687 aa27.53■■■□□ 2
USF2-216ENST00000607959 MYH14Q7Z406 1995 aaKnown RBP27.53■■■□□ 2
USF2-216ENST00000607959 COL5A3P25940 1745 aaPredicted RBP27.53■■■□□ 2
USF2-216ENST00000607959 PLBD2Q8NHP8 589 aa27.53■■■□□ 2
USF2-216ENST00000607959 ALDH1L1O75891 902 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms