RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 PPARGC1BQ86YN6 1023 aaKnown RBP7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 SLC9A9Q8IVB4 645 aa7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 C1orf216Q8TAB5 229 aa7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 ZDHHC1Q8WTX9 485 aa7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 SCG3Q8WXD2 468 aaKnown RBP7.29□□□□□ -1.24
RNU6-88P-201ENST00000606801 SLC35F4A4IF30 521 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 IGFBP4P22692 258 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 GPC1P35052 558 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 SH3PXD2AQ5TCZ1 1133 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 POTEAQ6S8J7 498 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 LYSMD3Q7Z3D4 306 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 TXNDC2Q86VQ3 553 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 NLRP3Q96P20 1036 aa7.28□□□□□ -1.24
RNU6-88P-201ENST00000606801 AEBP1Q8IUX7 1158 aa7.27□□□□□ -1.25
RNU6-88P-201ENST00000606801 IRF7Q92985 503 aa7.27□□□□□ -1.25
RNU6-88P-201ENST00000606801 ZSCAN10Q96SZ4 725 aaPredicted RBP7.27□□□□□ -1.25
RNU6-88P-201ENST00000606801 ERBB4Q15303 1308 aa7.27□□□□□ -1.25
RNU6-88P-201ENST00000606801 WIPF1O43516 503 aa7.26□□□□□ -1.25
RNU6-88P-201ENST00000606801 CCDC155Q8N6L0 562 aa7.26□□□□□ -1.25
RNU6-88P-201ENST00000606801 C2orf49Q9BVC5 232 aaPredicted RBP7.26□□□□□ -1.25
RNU6-88P-201ENST00000606801 SENP3-EIF4A1A0A087X0R7 540 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 SPATA31C2B4DYI2 1134 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 EML1O00423 815 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 TEAD4Q15561 434 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 PRICKLE2Q7Z3G6 844 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 STAG2Q8N3U4 1231 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 SEPT3Q9UH03 358 aa7.25□□□□□ -1.25
RNU6-88P-201ENST00000606801 FOXO3O43524 673 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 VSIG8P0DPA2 414 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 NOS2P35228 1153 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 POU4F2Q12837 409 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 SLC27A3Q5K4L6 730 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 CHMP7Q8WUX9 453 aaPredicted RBP7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 C7orf43Q8WVR3 580 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 GNEQ9Y223 722 aaKnown RBP7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 PARP3Q9Y6F1 533 aa7.24□□□□□ -1.25
RNU6-88P-201ENST00000606801 GMPRP36959 345 aa7.23□□□□□ -1.25
RNU6-88P-201ENST00000606801 PSMA6P60900 246 aaKnown RBP7.23□□□□□ -1.25
RNU6-88P-201ENST00000606801 KCNA1Q09470 495 aa7.23□□□□□ -1.25
RNU6-88P-201ENST00000606801 RHBDD1Q8TEB9 315 aa7.23□□□□□ -1.25
RNU6-88P-201ENST00000606801 L3MBTL2Q969R5 705 aa7.23□□□□□ -1.25
RNU6-88P-201ENST00000606801 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
RNU6-88P-201ENST00000606801 CABP1Q9NZU7 370 aa7.23□□□□□ -1.25
RNU6-88P-201ENST00000606801 RHOQP17081 205 aa7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 ARID4AP29374 1257 aaPredicted RBP7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 TMEM214Q6NUQ4 689 aaKnown RBP7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 NBPF10Q6P3W6 841 aaKnown RBP7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 NBPF15Q8N660 670 aa7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 NANOS1Q8WY41 292 aaKnown RBP7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 KLRG1Q96E93 195 aa7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 SAP130Q9H0E3 1048 aa7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
RNU6-88P-201ENST00000606801 SERTM1A2A2V5 107 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 ITGA6P23229 1130 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 TXLNAP40222 546 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 PHKA2P46019 1235 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 SERPINB4P48594 390 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 NAA30Q147X3 362 aaPredicted RBP7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 B4GALNT3Q6L9W6 998 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 COL26A1Q96A83 441 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 NIFKQ9BYG3 293 aaKnown RBP7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 HCN4Q9Y3Q4 1203 aa7.21□□□□□ -1.26
RNU6-88P-201ENST00000606801 WDR44Q5JSH3 913 aa7.2□□□□□ -1.26
RNU6-88P-201ENST00000606801 QTRT2Q9H974 415 aaKnown RBP7.2□□□□□ -1.26
RNU6-88P-201ENST00000606801 LRFN2Q9ULH4 789 aa7.2□□□□□ -1.26
RNU6-88P-201ENST00000606801 PLA2G4AP47712 749 aa7.19□□□□□ -1.26
RNU6-88P-201ENST00000606801 ECM1Q16610 540 aa7.19□□□□□ -1.26
RNU6-88P-201ENST00000606801 FAM26DQ5JW98 314 aa7.19□□□□□ -1.26
RNU6-88P-201ENST00000606801 GNASQ5JWF2 1037 aa7.19□□□□□ -1.26
RNU6-88P-201ENST00000606801 COX20Q5RI15 118 aa7.19□□□□□ -1.26
RNU6-88P-201ENST00000606801 GPR161Q8N6U8 529 aaKnown RBP7.19□□□□□ -1.26
RNU6-88P-201ENST00000606801 DNMT3AQ9Y6K1 912 aaPredicted RBP7.19□□□□□ -1.26
RNU6-88P-201ENST00000606801 ALDH16A1Q8IZ83 802 aa7.18□□□□□ -1.26
RNU6-88P-201ENST00000606801 GTF3C2Q8WUA4 911 aaPredicted RBP7.18□□□□□ -1.26
RNU6-88P-201ENST00000606801 PHACTR1Q9C0D0 580 aa7.18□□□□□ -1.26
RNU6-88P-201ENST00000606801 ZNF232Q9UNY5 417 aa7.18□□□□□ -1.26
RNU6-88P-201ENST00000606801 DYRK1BQ9Y463 629 aa7.18□□□□□ -1.26
RNU6-88P-201ENST00000606801 PTCD1O75127 700 aaKnown RBP7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 ATP4AP20648 1035 aa7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 MTMR3Q13615 1198 aa7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 SV2AQ7L0J3 742 aa7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 MYO19Q96H55 970 aa7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 GZF1Q9H116 711 aaPredicted RBP7.17□□□□□ -1.26
RNU6-88P-201ENST00000606801 TNFRSF10BO14763 440 aa7.16□□□□□ -1.26
RNU6-88P-201ENST00000606801 CCER1Q8TC90 406 aaPredicted RBP7.16□□□□□ -1.26
RNU6-88P-201ENST00000606801 NGLY1Q96IV0 654 aa7.16□□□□□ -1.26
RNU6-88P-201ENST00000606801 TIMMDC1Q9NPL8 285 aa7.16□□□□□ -1.26
RNU6-88P-201ENST00000606801 ANO2Q9NQ90 1003 aa7.16□□□□□ -1.26
RNU6-88P-201ENST00000606801 CUEDC1Q9NWM3 386 aaPredicted RBP7.16□□□□□ -1.26
RNU6-88P-201ENST00000606801 ZBTB7CA1YPR0 619 aa7.15□□□□□ -1.26
RNU6-88P-201ENST00000606801 CDC14CA4D256 554 aa7.15□□□□□ -1.26
RNU6-88P-201ENST00000606801 SOWAHDA6NJG2 315 aa7.15□□□□□ -1.26
RNU6-88P-201ENST00000606801 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
RNU6-88P-201ENST00000606801 MSX1P28360 303 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms