RNA–Protein interactions for RNA: ENST00000600625.5

GTPBP3-222, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene GTPBP3, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-222ENST00000600625 EPB41L2O43491 1005 aaKnown RBP23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 CAMK4Q16566 473 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 TRIM34Q9BYJ4 488 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 POLKQ9UBT6 870 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 CCDC171Q6TFL3 1326 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 AK2P54819 239 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 ANO6Q4KMQ2 910 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 TTC14Q96N46 770 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 LARP6Q9BRS8 491 aaKnown RBP23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 CLIP2Q9UDT6 1046 aa23.17■■□□□ 1.3
GTPBP3-222ENST00000600625 ATP7AQ04656 1500 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 FAM83GA6ND36 823 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 MTMR6Q9Y217 621 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 FBLN1P23142 703 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 HNRNPH2P55795 449 aaKnown RBP23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 PTPN14Q15678 1187 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 RUFY3Q7L099 469 aa23.16■■□□□ 1.3
GTPBP3-222ENST00000600625 PTPRCP08575 1304 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 TRERF1Q96PN7 1200 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 LRRCC1Q9C099 1032 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 RAD50Q92878 1312 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 TUBGCP6Q96RT7 1819 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 CD163L1Q9NR16 1453 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 HAP1P54257 671 aaPredicted RBP23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 ZNF446Q9NWS9 450 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 CHMP3Q9Y3E7 222 aa23.15■■□□□ 1.3
GTPBP3-222ENST00000600625 CAMSAP1Q5T5Y3 1602 aa23.14■■□□□ 1.3
GTPBP3-222ENST00000600625 CCDC144BQ3MJ40 725 aa23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 CCDC144CPQ8IYA2 1237 aa23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 IL25Q9H293 177 aa23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 CPSF1Q10570 1443 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 BMS1Q14692 1282 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 UNC5CLQ8IV45 518 aa23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 CKAP2LQ8IYA6 745 aa23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 TDRD7Q8NHU6 1098 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-222ENST00000600625 GJB2P29033 226 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 DCTN1Q14203 1278 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 NYAP1Q6ZVC0 841 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 HDGFL2Q7Z4V5 671 aaPredicted RBP23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 TNMDQ9H2S6 317 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 ABCA9Q8IUA7 1624 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 USP27XA6NNY8 438 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 LIG1P18858 919 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 SNX14Q9Y5W7 946 aa23.13■■□□□ 1.29
GTPBP3-222ENST00000600625 LRRC8AQ8IWT6 810 aa23.12■■□□□ 1.29
GTPBP3-222ENST00000600625 FEZ2Q9UHY8 353 aaPredicted RBP23.12■■□□□ 1.29
GTPBP3-222ENST00000600625 SLU7O95391 586 aaKnown RBP23.11■■□□□ 1.29
GTPBP3-222ENST00000600625 AEBP1Q8IUX7 1158 aa23.11■■□□□ 1.29
GTPBP3-222ENST00000600625 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
GTPBP3-222ENST00000600625 RNF20Q5VTR2 975 aa23.11■■□□□ 1.29
GTPBP3-222ENST00000600625 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
GTPBP3-222ENST00000600625 TTC6Q86TZ1 520 aa23.1■■□□□ 1.29
GTPBP3-222ENST00000600625 STAP2Q9UGK3 403 aa23.1■■□□□ 1.29
GTPBP3-222ENST00000600625 CDC25BP30305 580 aa23.1■■□□□ 1.29
GTPBP3-222ENST00000600625 ERBB3P21860 1342 aa23.1■■□□□ 1.29
GTPBP3-222ENST00000600625 VPS37CA5D8V6 355 aaPredicted RBP23.09■■□□□ 1.29
GTPBP3-222ENST00000600625 NEMFO60524 1076 aa23.09■■□□□ 1.29
GTPBP3-222ENST00000600625 KRT85P78386 507 aa23.09■■□□□ 1.29
GTPBP3-222ENST00000600625 CCDC83Q8IWF9 413 aa23.09■■□□□ 1.29
GTPBP3-222ENST00000600625 ABCC3O15438 1527 aa23.09■■□□□ 1.29
GTPBP3-222ENST00000600625 LARGE1O95461 756 aa23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 IL13P35225 146 aa23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 ZNF165P49910 485 aa23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 RAD51AP2Q09MP3 1159 aa23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 DACT1Q9NYF0 836 aa23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 GTF3C6Q969F1 213 aa23.08■■□□□ 1.29
GTPBP3-222ENST00000600625 NPHP1O15259 732 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 STK26Q9P289 416 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 ELP1O95163 1332 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 DTNBO60941 627 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 GNAI2P04899 355 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 SKILP12757 684 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 H2AFXP16104 143 aaPredicted RBP23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 IRX3P78415 501 aaPredicted RBP23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 SLC4A10Q6U841 1118 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 RASEFQ8IZ41 740 aa23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 ZCCHC11Q5TAX3 1644 aaKnown RBP23.07■■□□□ 1.28
GTPBP3-222ENST00000600625 FHOD1Q9Y613 1164 aa23.06■■□□□ 1.28
GTPBP3-222ENST00000600625 ARID5BQ14865 1188 aa23.06■■□□□ 1.28
GTPBP3-222ENST00000600625 MINK1Q8N4C8 1332 aaPredicted RBP23.06■■□□□ 1.28
GTPBP3-222ENST00000600625 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
GTPBP3-222ENST00000600625 KIF20BQ96Q89 1820 aa23.06■■□□□ 1.28
GTPBP3-222ENST00000600625 RBM43Q6ZSC3 357 aaKnown RBP23.05■■□□□ 1.28
GTPBP3-222ENST00000600625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.05■■□□□ 1.28
GTPBP3-222ENST00000600625 HYPKQ9NX55 129 aa23.05■■□□□ 1.28
GTPBP3-222ENST00000600625 SLC4A2P04920 1241 aa23.05■■□□□ 1.28
GTPBP3-222ENST00000600625 DNAJC25Q9H1X3 360 aa23.05■■□□□ 1.28
GTPBP3-222ENST00000600625 DDX19AQ9NUU7 478 aaKnown RBP23.05■■□□□ 1.28
GTPBP3-222ENST00000600625 TRMT1Q9NXH9 659 aaKnown RBP23.05■■□□□ 1.28
GTPBP3-222ENST00000600625 CCT4P50991 539 aaKnown RBP23.04■■□□□ 1.28
GTPBP3-222ENST00000600625 GOLGA6L4A6NEF3 574 aa23.04■■□□□ 1.28
GTPBP3-222ENST00000600625 SGSM2O43147 1006 aa23.04■■□□□ 1.28
GTPBP3-222ENST00000600625 CLSTN2Q9H4D0 955 aa23.04■■□□□ 1.28
GTPBP3-222ENST00000600625 EMILIN1Q9Y6C2 1016 aa23.04■■□□□ 1.28
GTPBP3-222ENST00000600625 CPA1P15085 419 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms