RNA–Protein interactions for RNA: ENST00000594617.7

PDE4C-207, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE4C, Length 4,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-207ENST00000594617 STX1AQ16623 288 aa18.26■□□□□ 0.51
PDE4C-207ENST00000594617 PPP4R3BQ5MIZ7 849 aa18.26■□□□□ 0.51
PDE4C-207ENST00000594617 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
PDE4C-207ENST00000594617 TNNQ9UQP3 1299 aa18.26■□□□□ 0.51
PDE4C-207ENST00000594617 ZMYM4Q5VZL5 1548 aa18.26■□□□□ 0.51
PDE4C-207ENST00000594617 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
PDE4C-207ENST00000594617 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
PDE4C-207ENST00000594617 C8orf76Q96K31 380 aa18.25■□□□□ 0.51
PDE4C-207ENST00000594617 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
PDE4C-207ENST00000594617 DBF4Q9UBU7 674 aaPredicted RBP18.25■□□□□ 0.51
PDE4C-207ENST00000594617 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
PDE4C-207ENST00000594617 CALCOCO1Q9P1Z2 691 aa18.25■□□□□ 0.51
PDE4C-207ENST00000594617 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
PDE4C-207ENST00000594617 PZPP20742 1482 aa18.24■□□□□ 0.51
PDE4C-207ENST00000594617 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
PDE4C-207ENST00000594617 URI1O94763 535 aaPredicted RBP18.24■□□□□ 0.51
PDE4C-207ENST00000594617 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
PDE4C-207ENST00000594617 MEIS3Q99687 375 aa18.24■□□□□ 0.51
PDE4C-207ENST00000594617 GNL3LQ9NVN8 582 aaKnown RBP18.24■□□□□ 0.51
PDE4C-207ENST00000594617 ERICH4A6NGS2 130 aa18.24■□□□□ 0.51
PDE4C-207ENST00000594617 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
PDE4C-207ENST00000594617 FAM200AQ8TCP9 573 aa18.24■□□□□ 0.51
PDE4C-207ENST00000594617 TSPYL1Q9H0U9 437 aa18.24■□□□□ 0.51
PDE4C-207ENST00000594617 RAD21O60216 631 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 CDK5RAP3Q96JB5 506 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 SLC26A8Q96RN1 970 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 TFIP11Q9UBB9 837 aaKnown RBP18.23■□□□□ 0.51
PDE4C-207ENST00000594617 INTS4Q96HW7 963 aaKnown RBP18.23■□□□□ 0.51
PDE4C-207ENST00000594617 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
PDE4C-207ENST00000594617 SHANK2Q9UPX8 1470 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 CCDC181Q5TID7 509 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 FSIP1Q8NA03 581 aa18.23■□□□□ 0.51
PDE4C-207ENST00000594617 KIAA0754O94854 1291 aa18.22■□□□□ 0.51
PDE4C-207ENST00000594617 GIMAP6Q6P9H5 292 aa18.22■□□□□ 0.51
PDE4C-207ENST00000594617 USP48Q86UV5 1035 aa18.22■□□□□ 0.51
PDE4C-207ENST00000594617 ZSCAN16Q9H4T2 348 aaPredicted RBP18.22■□□□□ 0.51
PDE4C-207ENST00000594617 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
PDE4C-207ENST00000594617 FAM83GA6ND36 823 aa18.22■□□□□ 0.51
PDE4C-207ENST00000594617 RBM33Q96EV2 1170 aaKnown RBP18.22■□□□□ 0.51
PDE4C-207ENST00000594617 CCDC8Q9H0W5 538 aaPredicted RBP18.22■□□□□ 0.51
PDE4C-207ENST00000594617 DEF6Q9H4E7 631 aa18.22■□□□□ 0.51
PDE4C-207ENST00000594617 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
PDE4C-207ENST00000594617 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
PDE4C-207ENST00000594617 BLMP54132 1417 aaPredicted RBP18.21■□□□□ 0.51
PDE4C-207ENST00000594617 GOLGA6L10A6NI86 522 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 CCAR1Q8IX12 1150 aaKnown RBP18.21■□□□□ 0.51
PDE4C-207ENST00000594617 NUP133Q8WUM0 1156 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 CCDC102AQ96A19 550 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 TCEAL9Q9UHQ7 104 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 VAMP4O75379 141 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 USP8P40818 1118 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 ATP10BO94823 1461 aa18.21■□□□□ 0.51
PDE4C-207ENST00000594617 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 HYPKQ9NX55 129 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 TRMT1Q9NXH9 659 aaKnown RBP18.2■□□□□ 0.5
PDE4C-207ENST00000594617 AKAP2Q9Y2D5 859 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 CCDC191Q8NCU4 936 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 LARP6Q9BRS8 491 aaKnown RBP18.2■□□□□ 0.5
PDE4C-207ENST00000594617 RRAGDQ9NQL2 400 aaPredicted RBP18.2■□□□□ 0.5
PDE4C-207ENST00000594617 KDM5BQ9UGL1 1544 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 GOLGA6L9A6NEM1 432 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 CT47A1Q5JQC4 288 aaPredicted RBP18.2■□□□□ 0.5
PDE4C-207ENST00000594617 KIF5CO60282 957 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 TSHZ3Q63HK5 1081 aa18.2■□□□□ 0.5
PDE4C-207ENST00000594617 CCDC148Q8NFR7 591 aa18.19■□□□□ 0.5
PDE4C-207ENST00000594617 BMS1Q14692 1282 aaKnown RBP18.19■□□□□ 0.5
PDE4C-207ENST00000594617 CEP135Q66GS9 1140 aa18.19■□□□□ 0.5
PDE4C-207ENST00000594617 PLEKHM2Q8IWE5 1019 aa18.19■□□□□ 0.5
PDE4C-207ENST00000594617 CCDC150Q8NCX0 1101 aa18.19■□□□□ 0.5
PDE4C-207ENST00000594617 CD109Q6YHK3 1445 aa18.19■□□□□ 0.5
PDE4C-207ENST00000594617 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
PDE4C-207ENST00000594617 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
PDE4C-207ENST00000594617 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
PDE4C-207ENST00000594617 F13A1P00488 732 aa18.18■□□□□ 0.5
PDE4C-207ENST00000594617 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
PDE4C-207ENST00000594617 CASQ1P31415 396 aa18.18■□□□□ 0.5
PDE4C-207ENST00000594617 ATP8B2P98198 1209 aa18.18■□□□□ 0.5
PDE4C-207ENST00000594617 SNW1Q13573 536 aaKnown RBP18.18■□□□□ 0.5
PDE4C-207ENST00000594617 TDO2P48775 406 aa18.18■□□□□ 0.5
PDE4C-207ENST00000594617 ERLIN2O94905 339 aa18.18■□□□□ 0.5
PDE4C-207ENST00000594617 CCDC43Q96MW1 224 aaKnown RBP18.18■□□□□ 0.5
PDE4C-207ENST00000594617 NEK1Q96PY6 1258 aa18.18■□□□□ 0.5
PDE4C-207ENST00000594617 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
PDE4C-207ENST00000594617 CCDC196A0A1B0GTZ2 297 aa18.17■□□□□ 0.5
PDE4C-207ENST00000594617 MAP9Q49MG5 647 aa18.17■□□□□ 0.5
PDE4C-207ENST00000594617 CRACR2AQ9BSW2 395 aa18.17■□□□□ 0.5
PDE4C-207ENST00000594617 JAKMIP3Q5VZ66 844 aa18.17■□□□□ 0.5
PDE4C-207ENST00000594617 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
PDE4C-207ENST00000594617 SPATA31E1Q6ZUB1 1445 aa18.16■□□□□ 0.5
PDE4C-207ENST00000594617 MCM3P25205 808 aa18.16■□□□□ 0.5
PDE4C-207ENST00000594617 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
PDE4C-207ENST00000594617 MPHOSPH8Q99549 860 aa18.16■□□□□ 0.5
PDE4C-207ENST00000594617 WDR62O43379 1518 aa18.16■□□□□ 0.5
PDE4C-207ENST00000594617 CEP85Q6P2H3 762 aa18.16■□□□□ 0.5
PDE4C-207ENST00000594617 CCDC186Q7Z3E2 898 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms