RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 WWC3Q9ULE0 1092 aa12.03□□□□□ -0.48
SMAD4-215ENST00000592911 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
SMAD4-215ENST00000592911 CCDC88AQ3V6T2 1871 aa12.03□□□□□ -0.48
SMAD4-215ENST00000592911 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
SMAD4-215ENST00000592911 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.48
SMAD4-215ENST00000592911 VEGFAP15692 232 aaPredicted RBP12.02□□□□□ -0.49
SMAD4-215ENST00000592911 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
SMAD4-215ENST00000592911 CARD14Q9BXL6 1004 aa12.02□□□□□ -0.49
SMAD4-215ENST00000592911 POLKQ9UBT6 870 aa12.02□□□□□ -0.49
SMAD4-215ENST00000592911 AFDNP55196 1824 aaKnown RBP12.02□□□□□ -0.49
SMAD4-215ENST00000592911 TJP1Q07157 1748 aa12.01□□□□□ -0.49
SMAD4-215ENST00000592911 GLTPD2A6NH11 291 aa12.01□□□□□ -0.49
SMAD4-215ENST00000592911 LMNB1P20700 586 aa12.01□□□□□ -0.49
SMAD4-215ENST00000592911 SMIM5Q71RC9 77 aa12.01□□□□□ -0.49
SMAD4-215ENST00000592911 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
SMAD4-215ENST00000592911 CABP4P57796 275 aa12□□□□□ -0.49
SMAD4-215ENST00000592911 RRAGCQ9HB90 399 aa12□□□□□ -0.49
SMAD4-215ENST00000592911 POLRMTO00411 1230 aaKnown RBP11.99□□□□□ -0.49
SMAD4-215ENST00000592911 PPM1GO15355 546 aaPredicted RBP11.99□□□□□ -0.49
SMAD4-215ENST00000592911 TM4SF1P30408 202 aa11.99□□□□□ -0.49
SMAD4-215ENST00000592911 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
SMAD4-215ENST00000592911 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
SMAD4-215ENST00000592911 ZPR1O75312 459 aa11.98□□□□□ -0.49
SMAD4-215ENST00000592911 DDR1Q08345 913 aa11.98□□□□□ -0.49
SMAD4-215ENST00000592911 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
SMAD4-215ENST00000592911 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
SMAD4-215ENST00000592911 TIMELESSQ9UNS1 1208 aa11.98□□□□□ -0.49
SMAD4-215ENST00000592911 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
SMAD4-215ENST00000592911 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
SMAD4-215ENST00000592911 MTHFSP49914 203 aa11.97□□□□□ -0.49
SMAD4-215ENST00000592911 MRC1P22897 1456 aa11.96□□□□□ -0.49
SMAD4-215ENST00000592911 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.49
SMAD4-215ENST00000592911 SCN4AP35499 1836 aa11.96□□□□□ -0.49
SMAD4-215ENST00000592911 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
SMAD4-215ENST00000592911 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.49
SMAD4-215ENST00000592911 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.49
SMAD4-215ENST00000592911 DPY19L2Q6NUT2 758 aa11.96□□□□□ -0.49
SMAD4-215ENST00000592911 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
SMAD4-215ENST00000592911 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.49
SMAD4-215ENST00000592911 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
SMAD4-215ENST00000592911 LTBP3Q9NS15 1303 aa11.95□□□□□ -0.5
SMAD4-215ENST00000592911 TTLL6Q8N841 843 aa11.95□□□□□ -0.5
SMAD4-215ENST00000592911 NARFQ9UHQ1 456 aa11.95□□□□□ -0.5
SMAD4-215ENST00000592911 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
SMAD4-215ENST00000592911 HTRA3P83110 453 aa11.94□□□□□ -0.5
SMAD4-215ENST00000592911 INTS5Q6P9B9 1019 aaKnown RBP11.94□□□□□ -0.5
SMAD4-215ENST00000592911 PRDM10Q9NQV6 1147 aa11.94□□□□□ -0.5
SMAD4-215ENST00000592911 ARFGEF2Q9Y6D5 1785 aa11.94□□□□□ -0.5
SMAD4-215ENST00000592911 UBR2Q8IWV8 1755 aa11.93□□□□□ -0.5
SMAD4-215ENST00000592911 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
SMAD4-215ENST00000592911 CHRNA5P30532 468 aa11.93□□□□□ -0.5
SMAD4-215ENST00000592911 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
SMAD4-215ENST00000592911 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
SMAD4-215ENST00000592911 COL15A1P39059 1388 aa11.92□□□□□ -0.5
SMAD4-215ENST00000592911 H0YIN7 160 aa11.92□□□□□ -0.5
SMAD4-215ENST00000592911 AKAP4Q5JQC9 854 aa11.92□□□□□ -0.5
SMAD4-215ENST00000592911 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
SMAD4-215ENST00000592911 NFATC2IPQ8NCF5 419 aa11.92□□□□□ -0.5
SMAD4-215ENST00000592911 A0A087WZG4 1122 aa11.91□□□□□ -0.5
SMAD4-215ENST00000592911 NFIXQ14938 502 aa11.91□□□□□ -0.5
SMAD4-215ENST00000592911 USPL1Q5W0Q7 1092 aa11.91□□□□□ -0.5
SMAD4-215ENST00000592911 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
SMAD4-215ENST00000592911 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
SMAD4-215ENST00000592911 IQCA1LA6NCM1 817 aa11.9□□□□□ -0.5
SMAD4-215ENST00000592911 NFKBIEO00221 500 aa11.9□□□□□ -0.5
SMAD4-215ENST00000592911 SERPINB2P05120 415 aa11.9□□□□□ -0.5
SMAD4-215ENST00000592911 CYP19A1P11511 503 aaPredicted RBP11.9□□□□□ -0.5
SMAD4-215ENST00000592911 PDE6BP35913 854 aa11.9□□□□□ -0.5
SMAD4-215ENST00000592911 RASSF7Q02833 373 aa11.9□□□□□ -0.5
SMAD4-215ENST00000592911 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
SMAD4-215ENST00000592911 SCN7AQ01118 1682 aa11.9□□□□□ -0.5
SMAD4-215ENST00000592911 POTECB2RU33 542 aa11.89□□□□□ -0.51
SMAD4-215ENST00000592911 BRIP1Q9BX63 1249 aa11.89□□□□□ -0.51
SMAD4-215ENST00000592911 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
SMAD4-215ENST00000592911 C2CD5Q86YS7 1000 aa11.88□□□□□ -0.51
SMAD4-215ENST00000592911 DNAJC10Q8IXB1 793 aa11.88□□□□□ -0.51
SMAD4-215ENST00000592911 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
SMAD4-215ENST00000592911 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
SMAD4-215ENST00000592911 RGL2O15211 777 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 SLC34A2O95436 690 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 STARD3NLO95772 234 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 CTCFP49711 727 aaPredicted RBP11.87□□□□□ -0.51
SMAD4-215ENST00000592911 ERFEQ4G0M1 354 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
SMAD4-215ENST00000592911 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
SMAD4-215ENST00000592911 EIF5P55010 431 aaKnown RBP11.86□□□□□ -0.51
SMAD4-215ENST00000592911 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
SMAD4-215ENST00000592911 AIDAQ96BJ3 306 aa11.86□□□□□ -0.51
SMAD4-215ENST00000592911 BCL2L12Q9HB09 334 aa11.86□□□□□ -0.51
SMAD4-215ENST00000592911 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
SMAD4-215ENST00000592911 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-215ENST00000592911 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
SMAD4-215ENST00000592911 IL13P35225 146 aa11.85□□□□□ -0.51
SMAD4-215ENST00000592911 STYK1Q6J9G0 422 aa11.85□□□□□ -0.51
SMAD4-215ENST00000592911 SLX4Q8IY92 1834 aa11.84□□□□□ -0.51
SMAD4-215ENST00000592911 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
SMAD4-215ENST00000592911 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms