RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 COL24A1Q17RW2 1714 aa15.6■□□□□ 0.09
H3F3B-212ENST00000592643 CHL1O00533 1208 aa15.59■□□□□ 0.09
H3F3B-212ENST00000592643 ZNF853P0CG23 659 aa15.59■□□□□ 0.09
H3F3B-212ENST00000592643 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
H3F3B-212ENST00000592643 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
H3F3B-212ENST00000592643 SLC16A10Q8TF71 515 aa15.59■□□□□ 0.09
H3F3B-212ENST00000592643 A1BGP04217 495 aa15.58■□□□□ 0.08
H3F3B-212ENST00000592643 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
H3F3B-212ENST00000592643 KRT24Q2M2I5 525 aa15.58■□□□□ 0.08
H3F3B-212ENST00000592643 MSL1Q68DK7 614 aa15.58■□□□□ 0.08
H3F3B-212ENST00000592643 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.08
H3F3B-212ENST00000592643 MIER1Q8N108 512 aa15.58■□□□□ 0.08
H3F3B-212ENST00000592643 RTCBQ9Y3I0 505 aaKnown RBP15.58■□□□□ 0.08
H3F3B-212ENST00000592643 GIGYF1O75420 1035 aaPredicted RBP15.57■□□□□ 0.08
H3F3B-212ENST00000592643 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
H3F3B-212ENST00000592643 FLAD1Q8NFF5 587 aa15.57■□□□□ 0.08
H3F3B-212ENST00000592643 SRP68Q9UHB9 627 aaKnown RBP15.57■□□□□ 0.08
H3F3B-212ENST00000592643 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
H3F3B-212ENST00000592643 SNRPA1P09661 255 aaKnown RBP15.56■□□□□ 0.08
H3F3B-212ENST00000592643 EIF5P55010 431 aaKnown RBP15.56■□□□□ 0.08
H3F3B-212ENST00000592643 TRAPPC3LQ5T215 181 aa15.56■□□□□ 0.08
H3F3B-212ENST00000592643 NBPF10Q6P3W6 841 aaKnown RBP15.56■□□□□ 0.08
H3F3B-212ENST00000592643 NBPF15Q8N660 670 aa15.56■□□□□ 0.08
H3F3B-212ENST00000592643 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
H3F3B-212ENST00000592643 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
H3F3B-212ENST00000592643 STARD3NLO95772 234 aa15.55■□□□□ 0.08
H3F3B-212ENST00000592643 GYS1P13807 737 aa15.55■□□□□ 0.08
H3F3B-212ENST00000592643 HMGB2P26583 209 aaKnown RBP15.55■□□□□ 0.08
H3F3B-212ENST00000592643 CANXP27824 592 aaKnown RBP15.55■□□□□ 0.08
H3F3B-212ENST00000592643 CCDC27Q2M243 656 aa15.55■□□□□ 0.08
H3F3B-212ENST00000592643 WWC1Q8IX03 1113 aa15.55■□□□□ 0.08
H3F3B-212ENST00000592643 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
H3F3B-212ENST00000592643 BABAM1Q9NWV8 329 aa15.55■□□□□ 0.08
H3F3B-212ENST00000592643 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
H3F3B-212ENST00000592643 CFAP44Q96MT7 982 aa15.54■□□□□ 0.08
H3F3B-212ENST00000592643 TEX13AQ9BXU3 409 aaPredicted RBP15.54■□□□□ 0.08
H3F3B-212ENST00000592643 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
H3F3B-212ENST00000592643 GOLGB1Q14789 3259 aaKnown RBP15.54■□□□□ 0.08
H3F3B-212ENST00000592643 UTRNP46939 3433 aa15.53■□□□□ 0.08
H3F3B-212ENST00000592643 COL15A1P39059 1388 aa15.53■□□□□ 0.08
H3F3B-212ENST00000592643 USP42Q9H9J4 1324 aaKnown RBP15.53■□□□□ 0.08
H3F3B-212ENST00000592643 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
H3F3B-212ENST00000592643 LRP10Q7Z4F1 713 aa15.53■□□□□ 0.08
H3F3B-212ENST00000592643 FKBP8Q14318 412 aa15.52■□□□□ 0.08
H3F3B-212ENST00000592643 ARXQ96QS3 562 aa15.52■□□□□ 0.08
H3F3B-212ENST00000592643 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
H3F3B-212ENST00000592643 RFC4P35249 363 aa15.51■□□□□ 0.07
H3F3B-212ENST00000592643 IL6STP40189 918 aaPredicted RBP15.51■□□□□ 0.07
H3F3B-212ENST00000592643 PDIA6Q15084 440 aa15.51■□□□□ 0.07
H3F3B-212ENST00000592643 IFT57Q9NWB7 429 aa15.51■□□□□ 0.07
H3F3B-212ENST00000592643 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
H3F3B-212ENST00000592643 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
H3F3B-212ENST00000592643 USPL1Q5W0Q7 1092 aa15.5■□□□□ 0.07
H3F3B-212ENST00000592643 FHDC1Q9C0D6 1143 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-212ENST00000592643 NARFQ9UHQ1 456 aa15.5■□□□□ 0.07
H3F3B-212ENST00000592643 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-212ENST00000592643 DDR1Q08345 913 aa15.49■□□□□ 0.07
H3F3B-212ENST00000592643 PROSER3Q2NL68 480 aa15.49■□□□□ 0.07
H3F3B-212ENST00000592643 CAMTA2O94983 1202 aa15.48■□□□□ 0.07
H3F3B-212ENST00000592643 MMP10P09238 476 aa15.48■□□□□ 0.07
H3F3B-212ENST00000592643 TM4SF1P30408 202 aa15.48■□□□□ 0.07
H3F3B-212ENST00000592643 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
H3F3B-212ENST00000592643 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
H3F3B-212ENST00000592643 TBC1D2BQ9UPU7 963 aa15.48■□□□□ 0.07
H3F3B-212ENST00000592643 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
H3F3B-212ENST00000592643 NLGN1Q8N2Q7 840 aa15.47■□□□□ 0.07
H3F3B-212ENST00000592643 TSPYL6Q8N831 410 aa15.47■□□□□ 0.07
H3F3B-212ENST00000592643 SYT17Q9BSW7 474 aa15.47■□□□□ 0.07
H3F3B-212ENST00000592643 IL16Q14005 1332 aa15.46■□□□□ 0.07
H3F3B-212ENST00000592643 ANXA1P04083 346 aa15.46■□□□□ 0.07
H3F3B-212ENST00000592643 POLD1P28340 1107 aa15.46■□□□□ 0.07
H3F3B-212ENST00000592643 GNAI1P63096 354 aa15.46■□□□□ 0.07
H3F3B-212ENST00000592643 NFIXQ14938 502 aa15.46■□□□□ 0.07
H3F3B-212ENST00000592643 NLGN2Q8NFZ4 835 aa15.46■□□□□ 0.07
H3F3B-212ENST00000592643 PPP1R1BQ9UD71 204 aaPredicted RBP15.46■□□□□ 0.07
H3F3B-212ENST00000592643 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
H3F3B-212ENST00000592643 EIF2S2P20042 333 aaKnown RBP15.45■□□□□ 0.06
H3F3B-212ENST00000592643 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
H3F3B-212ENST00000592643 TTLL7Q6ZT98 887 aa15.45■□□□□ 0.06
H3F3B-212ENST00000592643 NECTIN2Q92692 538 aa15.45■□□□□ 0.06
H3F3B-212ENST00000592643 ZNF330Q9Y3S2 320 aaPredicted RBP15.45■□□□□ 0.06
H3F3B-212ENST00000592643 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
H3F3B-212ENST00000592643 TBC1D9BQ66K14 1250 aa15.44■□□□□ 0.06
H3F3B-212ENST00000592643 DZIP3Q86Y13 1208 aaKnown RBP15.44■□□□□ 0.06
H3F3B-212ENST00000592643 WDR63Q8IWG1 891 aa15.44■□□□□ 0.06
H3F3B-212ENST00000592643 SCN7AQ01118 1682 aa15.44■□□□□ 0.06
H3F3B-212ENST00000592643 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
H3F3B-212ENST00000592643 ELL2O00472 640 aaPredicted RBP15.43■□□□□ 0.06
H3F3B-212ENST00000592643 ZPR1O75312 459 aa15.43■□□□□ 0.06
H3F3B-212ENST00000592643 HOXB7P09629 217 aa15.43■□□□□ 0.06
H3F3B-212ENST00000592643 MYL6BP14649 208 aa15.43■□□□□ 0.06
H3F3B-212ENST00000592643 HLFQ16534 295 aa15.43■□□□□ 0.06
H3F3B-212ENST00000592643 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
H3F3B-212ENST00000592643 A0A087WZG4 1122 aa15.42■□□□□ 0.06
H3F3B-212ENST00000592643 CHPF2Q9P2E5 772 aa15.42■□□□□ 0.06
H3F3B-212ENST00000592643 C10orf71Q711Q0 1435 aa15.42■□□□□ 0.06
H3F3B-212ENST00000592643 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
H3F3B-212ENST00000592643 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
H3F3B-212ENST00000592643 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
H3F3B-212ENST00000592643 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms