RNA–Protein interactions for RNA: ENST00000592194.1

PRKAR1A-220, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-220ENST00000592194 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.52
PRKAR1A-220ENST00000592194 PARP3Q9Y6F1 533 aa18.33■□□□□ 0.52
PRKAR1A-220ENST00000592194 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.52
PRKAR1A-220ENST00000592194 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
PRKAR1A-220ENST00000592194 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
PRKAR1A-220ENST00000592194 DPEP1P16444 411 aa18.32■□□□□ 0.52
PRKAR1A-220ENST00000592194 COL3A1P02461 1466 aaPredicted RBP18.32■□□□□ 0.52
PRKAR1A-220ENST00000592194 MRC1P22897 1456 aa18.32■□□□□ 0.52
PRKAR1A-220ENST00000592194 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
PRKAR1A-220ENST00000592194 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
PRKAR1A-220ENST00000592194 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
PRKAR1A-220ENST00000592194 TM4SF1P30408 202 aa18.31■□□□□ 0.52
PRKAR1A-220ENST00000592194 DDR1Q08345 913 aa18.3■□□□□ 0.52
PRKAR1A-220ENST00000592194 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
PRKAR1A-220ENST00000592194 PPP2R1AP30153 589 aa18.29■□□□□ 0.52
PRKAR1A-220ENST00000592194 IL17REQ8NFR9 667 aa18.29■□□□□ 0.52
PRKAR1A-220ENST00000592194 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
PRKAR1A-220ENST00000592194 BCS1LQ9Y276 419 aa18.29■□□□□ 0.52
PRKAR1A-220ENST00000592194 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
PRKAR1A-220ENST00000592194 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
PRKAR1A-220ENST00000592194 POLRMTO00411 1230 aaKnown RBP18.26■□□□□ 0.51
PRKAR1A-220ENST00000592194 U2SURPO15042 1029 aaKnown RBP18.26■□□□□ 0.51
PRKAR1A-220ENST00000592194 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
PRKAR1A-220ENST00000592194 ZNF526Q8TF50 670 aaPredicted RBP18.26■□□□□ 0.51
PRKAR1A-220ENST00000592194 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
PRKAR1A-220ENST00000592194 ZBTB1Q9Y2K1 713 aa18.26■□□□□ 0.51
PRKAR1A-220ENST00000592194 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
PRKAR1A-220ENST00000592194 ZPR1O75312 459 aa18.25■□□□□ 0.51
PRKAR1A-220ENST00000592194 FCHSD2O94868 740 aa18.25■□□□□ 0.51
PRKAR1A-220ENST00000592194 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
PRKAR1A-220ENST00000592194 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
PRKAR1A-220ENST00000592194 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
PRKAR1A-220ENST00000592194 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
PRKAR1A-220ENST00000592194 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
PRKAR1A-220ENST00000592194 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
PRKAR1A-220ENST00000592194 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
PRKAR1A-220ENST00000592194 PIM2Q9P1W9 311 aa18.24■□□□□ 0.51
PRKAR1A-220ENST00000592194 SIPA1L3O60292 1781 aaPredicted RBP18.23■□□□□ 0.51
PRKAR1A-220ENST00000592194 KIF3CO14782 793 aa18.23■□□□□ 0.51
PRKAR1A-220ENST00000592194 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
PRKAR1A-220ENST00000592194 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
PRKAR1A-220ENST00000592194 NFIXQ14938 502 aa18.22■□□□□ 0.51
PRKAR1A-220ENST00000592194 ZNF496Q96IT1 587 aaPredicted RBP18.22■□□□□ 0.51
PRKAR1A-220ENST00000592194 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
PRKAR1A-220ENST00000592194 COL15A1P39059 1388 aa18.21■□□□□ 0.51
PRKAR1A-220ENST00000592194 CHRNA5P30532 468 aa18.21■□□□□ 0.51
PRKAR1A-220ENST00000592194 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
PRKAR1A-220ENST00000592194 PRKRIP1Q9H875 184 aaPredicted RBP18.21■□□□□ 0.51
PRKAR1A-220ENST00000592194 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
PRKAR1A-220ENST00000592194 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
PRKAR1A-220ENST00000592194 SBF1O95248 1867 aa18.2■□□□□ 0.5
PRKAR1A-220ENST00000592194 CEMIPQ8WUJ3 1361 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 CEP350Q5VT06 3117 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 STARD3NLO95772 234 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 TEFQ10587 303 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 RALBP1Q15311 655 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
PRKAR1A-220ENST00000592194 KCNQ3O43525 872 aa18.18■□□□□ 0.5
PRKAR1A-220ENST00000592194 SERPINB2P05120 415 aa18.18■□□□□ 0.5
PRKAR1A-220ENST00000592194 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
PRKAR1A-220ENST00000592194 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
PRKAR1A-220ENST00000592194 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
PRKAR1A-220ENST00000592194 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
PRKAR1A-220ENST00000592194 NUDCQ9Y266 331 aa18.16■□□□□ 0.5
PRKAR1A-220ENST00000592194 A1BGP04217 495 aa18.15■□□□□ 0.5
PRKAR1A-220ENST00000592194 HSPA6P17066 643 aa18.15■□□□□ 0.5
PRKAR1A-220ENST00000592194 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
PRKAR1A-220ENST00000592194 A0A087WZG4 1122 aa18.14■□□□□ 0.49
PRKAR1A-220ENST00000592194 BTBD11A6QL63 1104 aa18.14■□□□□ 0.49
PRKAR1A-220ENST00000592194 IL6STP40189 918 aaPredicted RBP18.14■□□□□ 0.49
PRKAR1A-220ENST00000592194 CCDC184Q52MB2 194 aa18.14■□□□□ 0.49
PRKAR1A-220ENST00000592194 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
PRKAR1A-220ENST00000592194 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.498e-6■□□□□ 10.9
PRKAR1A-220ENST00000592194 TBC1D9BQ66K14 1250 aa18.13■□□□□ 0.49
PRKAR1A-220ENST00000592194 TBC1D2BQ9UPU7 963 aa18.13■□□□□ 0.49
PRKAR1A-220ENST00000592194 USP16Q9Y5T5 823 aa18.13■□□□□ 0.49
PRKAR1A-220ENST00000592194 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
PRKAR1A-220ENST00000592194 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
PRKAR1A-220ENST00000592194 CCDC88AQ3V6T2 1871 aa18.12■□□□□ 0.49
PRKAR1A-220ENST00000592194 TOMM70O94826 608 aa18.11■□□□□ 0.49
PRKAR1A-220ENST00000592194 DLEC1Q9Y238 1755 aa18.11■□□□□ 0.49
PRKAR1A-220ENST00000592194 ANKRD31Q8N7Z5 1873 aa18.1■□□□□ 0.49
PRKAR1A-220ENST00000592194 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
PRKAR1A-220ENST00000592194 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
PRKAR1A-220ENST00000592194 MCM10Q7L590 875 aa18.1■□□□□ 0.49
PRKAR1A-220ENST00000592194 H0YIN7 160 aa18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 HTATSF1O43719 755 aaKnown RBP18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 CAMTA2O94983 1202 aa18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 PRELPP51888 382 aa18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 DCTN1Q14203 1278 aa18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 TTLL6Q8N841 843 aa18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 RNF181Q9P0P0 153 aa18.09■□□□□ 0.49
PRKAR1A-220ENST00000592194 ANP32CO43423 234 aa18.08■□□□□ 0.48
PRKAR1A-220ENST00000592194 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
PRKAR1A-220ENST00000592194 RTF1Q92541 710 aaKnown RBP18.07■□□□□ 0.48
PRKAR1A-220ENST00000592194 BRIP1Q9BX63 1249 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms