RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SBF1O95248 1867 aa23.99■■□□□ 1.43
VAT1-208ENST00000590924 GNAT3A8MTJ3 354 aa23.99■■□□□ 1.43
VAT1-208ENST00000590924 ZPR1O75312 459 aa23.99■■□□□ 1.43
VAT1-208ENST00000590924 CFAP53Q96M91 514 aa23.99■■□□□ 1.43
VAT1-208ENST00000590924 ZBTB1Q9Y2K1 713 aa23.99■■□□□ 1.43
VAT1-208ENST00000590924 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
VAT1-208ENST00000590924 IL17REQ8NFR9 667 aa23.98■■□□□ 1.43
VAT1-208ENST00000590924 POLRMTO00411 1230 aaKnown RBP23.97■■□□□ 1.43
VAT1-208ENST00000590924 KCNA3P22001 575 aa23.97■■□□□ 1.43
VAT1-208ENST00000590924 TM4SF1P30408 202 aa23.97■■□□□ 1.43
VAT1-208ENST00000590924 TEFQ10587 303 aa23.97■■□□□ 1.43
VAT1-208ENST00000590924 USPL1Q5W0Q7 1092 aa23.97■■□□□ 1.43
VAT1-208ENST00000590924 TTC5Q8N0Z6 440 aa23.97■■□□□ 1.43
VAT1-208ENST00000590924 NARFQ9UHQ1 456 aa23.97■■□□□ 1.43
VAT1-208ENST00000590924 CEMIPQ8WUJ3 1361 aa23.96■■□□□ 1.43
VAT1-208ENST00000590924 FCHSD2O94868 740 aa23.95■■□□□ 1.42
VAT1-208ENST00000590924 RSPH6AQ9H0K4 717 aa23.95■■□□□ 1.42
VAT1-208ENST00000590924 HEG1Q9ULI3 1381 aa23.94■■□□□ 1.42
VAT1-208ENST00000590924 PPP2R1AP30153 589 aa23.94■■□□□ 1.42
VAT1-208ENST00000590924 ZNF790Q6PG37 636 aa23.94■■□□□ 1.42
VAT1-208ENST00000590924 ZNF526Q8TF50 670 aaPredicted RBP23.94■■□□□ 1.42
VAT1-208ENST00000590924 DLG5Q8TDM6 1919 aa23.94■■□□□ 1.42
VAT1-208ENST00000590924 STARD3NLO95772 234 aa23.93■■□□□ 1.42
VAT1-208ENST00000590924 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
VAT1-208ENST00000590924 ZNF496Q96IT1 587 aaPredicted RBP23.93■■□□□ 1.42
VAT1-208ENST00000590924 PIM2Q9P1W9 311 aa23.93■■□□□ 1.42
VAT1-208ENST00000590924 BCORQ6W2J9 1755 aa23.93■■□□□ 1.42
VAT1-208ENST00000590924 PHACTR3Q96KR7 559 aa23.92■■□□□ 1.42
VAT1-208ENST00000590924 PRKRIP1Q9H875 184 aaPredicted RBP23.92■■□□□ 1.42
VAT1-208ENST00000590924 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
VAT1-208ENST00000590924 ANKRD31Q8N7Z5 1873 aa23.92■■□□□ 1.42
VAT1-208ENST00000590924 NFIXQ14938 502 aa23.91■■□□□ 1.42
VAT1-208ENST00000590924 ARHGAP27Q6ZUM4 889 aa23.91■■□□□ 1.42
VAT1-208ENST00000590924 BCL2L12Q9HB09 334 aa23.91■■□□□ 1.42
VAT1-208ENST00000590924 CCDC88AQ3V6T2 1871 aa23.91■■□□□ 1.42
VAT1-208ENST00000590924 CANXP27824 592 aaKnown RBP23.9■■□□□ 1.42
VAT1-208ENST00000590924 EIF5P55010 431 aaKnown RBP23.9■■□□□ 1.42
VAT1-208ENST00000590924 TEX13AQ9BXU3 409 aaPredicted RBP23.9■■□□□ 1.42
VAT1-208ENST00000590924 DALRD3Q5D0E6 543 aaKnown RBP23.89■■□□□ 1.41
VAT1-208ENST00000590924 A0A087WZG4 1122 aa23.87■■□□□ 1.41
VAT1-208ENST00000590924 U2AF1L5P0DN76 240 aaPredicted RBP23.87■■□□□ 1.41
VAT1-208ENST00000590924 CHRNA5P30532 468 aa23.87■■□□□ 1.41
VAT1-208ENST00000590924 U2AF1Q01081 240 aaKnown RBP eCLIP23.87■■□□□ 1.41
VAT1-208ENST00000590924 FMNL2Q96PY5 1086 aa23.87■■□□□ 1.41
VAT1-208ENST00000590924 MYBBP1AQ9BQG0 1328 aaKnown RBP23.86■■□□□ 1.41
VAT1-208ENST00000590924 ANP32CO43423 234 aa23.86■■□□□ 1.41
VAT1-208ENST00000590924 KIF3CO14782 793 aa23.85■■□□□ 1.41
VAT1-208ENST00000590924 SERPINB2P05120 415 aa23.85■■□□□ 1.41
VAT1-208ENST00000590924 CEP350Q5VT06 3117 aa23.84■■□□□ 1.41
VAT1-208ENST00000590924 LAMB4A4D0S4 1761 aa23.84■■□□□ 1.41
VAT1-208ENST00000590924 BTBD11A6QL63 1104 aa23.84■■□□□ 1.41
VAT1-208ENST00000590924 IL6STP40189 918 aaPredicted RBP23.84■■□□□ 1.41
VAT1-208ENST00000590924 COL11A2P13942 1736 aaPredicted RBP23.84■■□□□ 1.41
VAT1-208ENST00000590924 CACNA1SQ13698 1873 aa23.83■■□□□ 1.41
VAT1-208ENST00000590924 TNRC6CQ9HCJ0 1690 aaKnown RBP23.83■■□□□ 1.4
VAT1-208ENST00000590924 RTF1Q92541 710 aaKnown RBP23.82■■□□□ 1.4
VAT1-208ENST00000590924 CARMIL3Q8ND23 1372 aa23.81■■□□□ 1.4
VAT1-208ENST00000590924 KDM3BQ7LBC6 1761 aa23.81■■□□□ 1.4
VAT1-208ENST00000590924 KCNQ3O43525 872 aa23.81■■□□□ 1.4
VAT1-208ENST00000590924 C9orf131Q5VYM1 1079 aa23.81■■□□□ 1.4
VAT1-208ENST00000590924 ARFGEF2Q9Y6D5 1785 aa23.8■■□□□ 1.4
VAT1-208ENST00000590924 DICER1Q9UPY3 1922 aaKnown RBP23.8■■□□□ 1.4
VAT1-208ENST00000590924 TIAM2Q8IVF5 1701 aa23.79■■□□□ 1.4
VAT1-208ENST00000590924 HTATSF1O43719 755 aaKnown RBP23.79■■□□□ 1.4
VAT1-208ENST00000590924 A1BGP04217 495 aa23.79■■□□□ 1.4
VAT1-208ENST00000590924 HSPA6P17066 643 aa23.79■■□□□ 1.4
VAT1-208ENST00000590924 TBC1D9BQ66K14 1250 aa23.79■■□□□ 1.4
VAT1-208ENST00000590924 MCM10Q7L590 875 aa23.79■■□□□ 1.4
VAT1-208ENST00000590924 ZNF330Q9Y3S2 320 aaPredicted RBP23.79■■□□□ 1.4
VAT1-208ENST00000590924 FER1L6Q2WGJ9 1857 aa23.79■■□□□ 1.4
VAT1-208ENST00000590924 BICDL1Q6ZP65 573 aa23.78■■□□□ 1.4
VAT1-208ENST00000590924 TBC1D2BQ9UPU7 963 aa23.78■■□□□ 1.4
VAT1-208ENST00000590924 NPM2Q86SE8 214 aaKnown RBP23.77■■□□□ 1.4
VAT1-208ENST00000590924 C2CD5Q86YS7 1000 aa23.76■■□□□ 1.39
VAT1-208ENST00000590924 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
VAT1-208ENST00000590924 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
VAT1-208ENST00000590924 H0YIN7 160 aa23.75■■□□□ 1.39
VAT1-208ENST00000590924 CAMTA2O94983 1202 aa23.75■■□□□ 1.39
VAT1-208ENST00000590924 TTLL6Q8N841 843 aa23.75■■□□□ 1.39
VAT1-208ENST00000590924 NMRK2Q9NPI5 230 aa23.75■■□□□ 1.39
VAT1-208ENST00000590924 TOMM70O94826 608 aa23.74■■□□□ 1.39
VAT1-208ENST00000590924 SNRPA1P09661 255 aaKnown RBP23.74■■□□□ 1.39
VAT1-208ENST00000590924 DCTN1Q14203 1278 aa23.74■■□□□ 1.39
VAT1-208ENST00000590924 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
VAT1-208ENST00000590924 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
VAT1-208ENST00000590924 PRR5LQ6MZQ0 368 aa23.73■■□□□ 1.39
VAT1-208ENST00000590924 DZIP3Q86Y13 1208 aaKnown RBP23.73■■□□□ 1.39
VAT1-208ENST00000590924 ZC3H4Q9UPT8 1303 aaKnown RBP23.73■■□□□ 1.39
VAT1-208ENST00000590924 SLX4Q8IY92 1834 aa23.73■■□□□ 1.39
VAT1-208ENST00000590924 PRAMEF22A3QJZ6 481 aa23.72■■□□□ 1.39
VAT1-208ENST00000590924 BRIP1Q9BX63 1249 aa23.72■■□□□ 1.39
VAT1-208ENST00000590924 NUP98P52948 1817 aa23.72■■□□□ 1.39
VAT1-208ENST00000590924 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
VAT1-208ENST00000590924 NEFMP07197 916 aa23.71■■□□□ 1.39
VAT1-208ENST00000590924 PDE6BP35913 854 aa23.71■■□□□ 1.39
VAT1-208ENST00000590924 RASSF7Q02833 373 aa23.71■■□□□ 1.39
VAT1-208ENST00000590924 SETDB2Q96T68 719 aa23.71■■□□□ 1.39
VAT1-208ENST00000590924 TAF7Q15545 349 aaPredicted RBP23.7■■□□□ 1.38
VAT1-208ENST00000590924 WDR90Q96KV7 1748 aa23.7■■□□□ 1.38
VAT1-208ENST00000590924 PIP4K2AP48426 406 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms