RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 CCDC146Q8IYE0 955 aa25.33■■□□□ 1.65
CIRBP-217ENST00000588230 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.65
CIRBP-217ENST00000588230 KIAA1551Q9HCM1 1747 aa25.32■■□□□ 1.64
CIRBP-217ENST00000588230 TAF7Q15545 349 aaPredicted RBP25.32■■□□□ 1.64
CIRBP-217ENST00000588230 GPR162Q16538 588 aa25.32■■□□□ 1.64
CIRBP-217ENST00000588230 NLGN1Q8N2Q7 840 aa25.32■■□□□ 1.64
CIRBP-217ENST00000588230 FMNL2Q96PY5 1086 aa25.32■■□□□ 1.64
CIRBP-217ENST00000588230 SRP68Q9UHB9 627 aaKnown RBP25.32■■□□□ 1.64
CIRBP-217ENST00000588230 CHD4Q14839 1912 aa25.31■■□□□ 1.64
CIRBP-217ENST00000588230 RIPK4P57078 832 aa25.31■■□□□ 1.64
CIRBP-217ENST00000588230 RUNDC1Q96C34 613 aa25.31■■□□□ 1.64
CIRBP-217ENST00000588230 ZBTB1Q9Y2K1 713 aa25.31■■□□□ 1.64
CIRBP-217ENST00000588230 HEG1Q9ULI3 1381 aa25.31■■□□□ 1.64
CIRBP-217ENST00000588230 C10orf71Q711Q0 1435 aa25.3■■□□□ 1.64
CIRBP-217ENST00000588230 KCNQ3O43525 872 aa25.3■■□□□ 1.64
CIRBP-217ENST00000588230 STARD3NLO95772 234 aa25.29■■□□□ 1.64
CIRBP-217ENST00000588230 TMPOP42166 694 aaKnown RBP25.29■■□□□ 1.64
CIRBP-217ENST00000588230 TEX13AQ9BXU3 409 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-217ENST00000588230 FKBP8Q14318 412 aa25.28■■□□□ 1.64
CIRBP-217ENST00000588230 THUMPD2Q9BTF0 503 aaKnown RBP25.28■■□□□ 1.64
CIRBP-217ENST00000588230 LMOD3Q0VAK6 560 aa25.27■■□□□ 1.64
CIRBP-217ENST00000588230 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
CIRBP-217ENST00000588230 PNISRQ8TF01 805 aaKnown RBP25.27■■□□□ 1.64
CIRBP-217ENST00000588230 RRP7AQ9Y3A4 280 aaKnown RBP25.27■■□□□ 1.64
CIRBP-217ENST00000588230 COL15A1P39059 1388 aa25.27■■□□□ 1.64
CIRBP-217ENST00000588230 PXDNLA1KZ92 1463 aa25.27■■□□□ 1.64
CIRBP-217ENST00000588230 NEUROD2Q15784 382 aa25.26■■□□□ 1.63
CIRBP-217ENST00000588230 CCDC184Q52MB2 194 aa25.26■■□□□ 1.63
CIRBP-217ENST00000588230 MIS18AQ9NYP9 233 aa25.26■■□□□ 1.63
CIRBP-217ENST00000588230 DDR1Q08345 913 aa25.25■■□□□ 1.63
CIRBP-217ENST00000588230 CANXP27824 592 aaKnown RBP25.23■■□□□ 1.63
CIRBP-217ENST00000588230 SNRPA1P09661 255 aaKnown RBP25.22■■□□□ 1.63
CIRBP-217ENST00000588230 EIF5P55010 431 aaKnown RBP25.22■■□□□ 1.63
CIRBP-217ENST00000588230 USPL1Q5W0Q7 1092 aa25.22■■□□□ 1.63
CIRBP-217ENST00000588230 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
CIRBP-217ENST00000588230 MRS2Q9HD23 443 aa25.22■■□□□ 1.63
CIRBP-217ENST00000588230 NARFQ9UHQ1 456 aa25.22■■□□□ 1.63
CIRBP-217ENST00000588230 TM4SF1P30408 202 aa25.21■■□□□ 1.63
CIRBP-217ENST00000588230 N4BP2Q86UW6 1770 aaPredicted RBP25.21■■□□□ 1.63
CIRBP-217ENST00000588230 PARP3Q9Y6F1 533 aa25.2■■□□□ 1.62
CIRBP-217ENST00000588230 POLRMTO00411 1230 aaKnown RBP25.19■■□□□ 1.62
CIRBP-217ENST00000588230 GRIN3BO60391 1043 aa25.19■■□□□ 1.62
CIRBP-217ENST00000588230 ZPR1O75312 459 aa25.19■■□□□ 1.62
CIRBP-217ENST00000588230 SCN7AQ01118 1682 aa25.19■■□□□ 1.62
CIRBP-217ENST00000588230 PRAMEF22A3QJZ6 481 aa25.18■■□□□ 1.62
CIRBP-217ENST00000588230 ZNF784Q8NCA9 323 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-217ENST00000588230 USP16Q9Y5T5 823 aa25.18■■□□□ 1.62
CIRBP-217ENST00000588230 KDM3BQ7LBC6 1761 aa25.18■■□□□ 1.62
CIRBP-217ENST00000588230 NRXN2Q9P2S2 1712 aa25.17■■□□□ 1.62
CIRBP-217ENST00000588230 BRCA1P38398 1863 aaKnown RBP25.17■■□□□ 1.62
CIRBP-217ENST00000588230 APAF1O14727 1248 aa25.17■■□□□ 1.62
CIRBP-217ENST00000588230 A1BGP04217 495 aa25.17■■□□□ 1.62
CIRBP-217ENST00000588230 TGFB2P61812 414 aa25.17■■□□□ 1.62
CIRBP-217ENST00000588230 WWC3Q9ULE0 1092 aa25.17■■□□□ 1.62
CIRBP-217ENST00000588230 NFIXQ14938 502 aa25.16■■□□□ 1.62
CIRBP-217ENST00000588230 NPM2Q86SE8 214 aaKnown RBP25.16■■□□□ 1.62
CIRBP-217ENST00000588230 TSPYL4Q9UJ04 414 aa25.16■■□□□ 1.62
CIRBP-217ENST00000588230 TRIM35Q9UPQ4 493 aa25.16■■□□□ 1.62
CIRBP-217ENST00000588230 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
CIRBP-217ENST00000588230 AFDNP55196 1824 aaKnown RBP25.15■■□□□ 1.62
CIRBP-217ENST00000588230 A0A087WZG4 1122 aa25.15■■□□□ 1.62
CIRBP-217ENST00000588230 IL6STP40189 918 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-217ENST00000588230 A0A0G2JLW4 131 aa25.14■■□□□ 1.62
CIRBP-217ENST00000588230 EIF4A1P60842 406 aaKnown RBP25.14■■□□□ 1.62
CIRBP-217ENST00000588230 BABAM1Q9NWV8 329 aa25.14■■□□□ 1.62
CIRBP-217ENST00000588230 DPEP1P16444 411 aa25.13■■□□□ 1.61
CIRBP-217ENST00000588230 KCNA3P22001 575 aa25.13■■□□□ 1.61
CIRBP-217ENST00000588230 LAMB4A4D0S4 1761 aa25.11■■□□□ 1.61
CIRBP-217ENST00000588230 BCORQ6W2J9 1755 aa25.11■■□□□ 1.61
CIRBP-217ENST00000588230 GIGYF1O75420 1035 aaPredicted RBP25.11■■□□□ 1.61
CIRBP-217ENST00000588230 LAS1LQ9Y4W2 734 aaKnown RBP25.11■■□□□ 1.61
CIRBP-217ENST00000588230 PIP4K2AP48426 406 aaPredicted RBP25.1■■□□□ 1.61
CIRBP-217ENST00000588230 TBC1D2BQ9UPU7 963 aa25.09■■□□□ 1.61
CIRBP-217ENST00000588230 ADCY9O60503 1353 aa25.08■■□□□ 1.61
CIRBP-217ENST00000588230 NBPF26B4DH59 902 aa25.08■■□□□ 1.61
CIRBP-217ENST00000588230 CAMTA2O94983 1202 aa25.08■■□□□ 1.61
CIRBP-217ENST00000588230 NBPF10Q6P3W6 841 aaKnown RBP25.08■■□□□ 1.61
CIRBP-217ENST00000588230 NBPF15Q8N660 670 aa25.08■■□□□ 1.61
CIRBP-217ENST00000588230 CHL1O00533 1208 aa25.07■■□□□ 1.6
CIRBP-217ENST00000588230 CARMIL3Q8ND23 1372 aa25.06■■□□□ 1.6
CIRBP-217ENST00000588230 SERPINB2P05120 415 aa25.06■■□□□ 1.6
CIRBP-217ENST00000588230 CALD1Q05682 793 aaKnown RBP25.06■■□□□ 1.6
CIRBP-217ENST00000588230 TBC1D9BQ66K14 1250 aa25.06■■□□□ 1.6
CIRBP-217ENST00000588230 DZIP3Q86Y13 1208 aaKnown RBP25.05■■□□□ 1.6
CIRBP-217ENST00000588230 ARFGEF1Q9Y6D6 1849 aa25.05■■□□□ 1.6
CIRBP-217ENST00000588230 CHRNA5P30532 468 aa25.04■■□□□ 1.6
CIRBP-217ENST00000588230 BCS1LQ9Y276 419 aa25.04■■□□□ 1.6
CIRBP-217ENST00000588230 BICDL1Q6ZP65 573 aa25.03■■□□□ 1.6
CIRBP-217ENST00000588230 CFAP44Q96MT7 982 aa25.03■■□□□ 1.6
CIRBP-217ENST00000588230 DLEC1Q9Y238 1755 aa25.03■■□□□ 1.6
CIRBP-217ENST00000588230 ANKRD31Q8N7Z5 1873 aa25.02■■□□□ 1.6
CIRBP-217ENST00000588230 SENP3-EIF4A1A0A087X0R7 540 aa25.02■■□□□ 1.6
CIRBP-217ENST00000588230 FAM9BQ8IZU0 186 aa25.02■■□□□ 1.6
CIRBP-217ENST00000588230 ATP10DQ9P241 1426 aa25.01■■□□□ 1.59
CIRBP-217ENST00000588230 EIF2S2P20042 333 aaKnown RBP25■■□□□ 1.59
CIRBP-217ENST00000588230 GNAI1P63096 354 aa25■■□□□ 1.59
CIRBP-217ENST00000588230 PIM2Q9P1W9 311 aa25■■□□□ 1.59
CIRBP-217ENST00000588230 NGEFQ8N5V2 710 aa24.99■■□□□ 1.59
CIRBP-217ENST00000588230 IFT57Q9NWB7 429 aa24.99■■□□□ 1.59
CIRBP-217ENST00000588230 ERBB4Q15303 1308 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms