RNA–Protein interactions for RNA: ENST00000588118.5

DNMT1-214, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-214ENST00000588118 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
DNMT1-214ENST00000588118 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
DNMT1-214ENST00000588118 RGS12O14924 1447 aa17.31■□□□□ 0.36
DNMT1-214ENST00000588118 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
DNMT1-214ENST00000588118 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
DNMT1-214ENST00000588118 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
DNMT1-214ENST00000588118 LAMB4A4D0S4 1761 aa17.3■□□□□ 0.36
DNMT1-214ENST00000588118 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
DNMT1-214ENST00000588118 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-214ENST00000588118 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
DNMT1-214ENST00000588118 G2E3Q7L622 706 aa17.3■□□□□ 0.36
DNMT1-214ENST00000588118 C5P01031 1676 aa17.29■□□□□ 0.36
DNMT1-214ENST00000588118 SYTL4Q96C24 671 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-214ENST00000588118 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
DNMT1-214ENST00000588118 PELP1Q8IZL8 1130 aaKnown RBP17.28■□□□□ 0.36
DNMT1-214ENST00000588118 ASAP1Q9ULH1 1129 aa17.28■□□□□ 0.36
DNMT1-214ENST00000588118 PXDNLA1KZ92 1463 aa17.28■□□□□ 0.36
DNMT1-214ENST00000588118 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
DNMT1-214ENST00000588118 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
DNMT1-214ENST00000588118 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.36
DNMT1-214ENST00000588118 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
DNMT1-214ENST00000588118 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
DNMT1-214ENST00000588118 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
DNMT1-214ENST00000588118 STARD3NLO95772 234 aa17.25■□□□□ 0.35
DNMT1-214ENST00000588118 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
DNMT1-214ENST00000588118 PDIA6Q15084 440 aa17.25■□□□□ 0.35
DNMT1-214ENST00000588118 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
DNMT1-214ENST00000588118 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
DNMT1-214ENST00000588118 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
DNMT1-214ENST00000588118 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
DNMT1-214ENST00000588118 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
DNMT1-214ENST00000588118 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
DNMT1-214ENST00000588118 CENPQQ7L2Z9 268 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-214ENST00000588118 DNAAF4Q8WXU2 420 aa17.23■□□□□ 0.35
DNMT1-214ENST00000588118 F6X3S4 739 aa17.22■□□□□ 0.35
DNMT1-214ENST00000588118 PROSER3Q2NL68 480 aa17.22■□□□□ 0.35
DNMT1-214ENST00000588118 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
DNMT1-214ENST00000588118 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
DNMT1-214ENST00000588118 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
DNMT1-214ENST00000588118 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
DNMT1-214ENST00000588118 ANXA1P04083 346 aa17.21■□□□□ 0.35
DNMT1-214ENST00000588118 MYL6BP14649 208 aa17.21■□□□□ 0.35
DNMT1-214ENST00000588118 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
DNMT1-214ENST00000588118 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
DNMT1-214ENST00000588118 ADCY9O60503 1353 aa17.2■□□□□ 0.34
DNMT1-214ENST00000588118 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
DNMT1-214ENST00000588118 LRP10Q7Z4F1 713 aa17.2■□□□□ 0.34
DNMT1-214ENST00000588118 DNAJC10Q8IXB1 793 aa17.2■□□□□ 0.34
DNMT1-214ENST00000588118 SRCIN1Q9C0H9 1055 aa17.2■□□□□ 0.34
DNMT1-214ENST00000588118 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
DNMT1-214ENST00000588118 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
DNMT1-214ENST00000588118 IBTKQ9P2D0 1353 aaPredicted RBP17.19■□□□□ 0.34
DNMT1-214ENST00000588118 CICQ96RK0 1608 aaPredicted RBP17.19■□□□□ 0.34
DNMT1-214ENST00000588118 GNAI3P08754 354 aa17.19■□□□□ 0.34
DNMT1-214ENST00000588118 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
DNMT1-214ENST00000588118 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
DNMT1-214ENST00000588118 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
DNMT1-214ENST00000588118 ZNF831Q5JPB2 1677 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 KCNQ2O43526 872 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 SIK1P57059 783 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
DNMT1-214ENST00000588118 HDAC1Q13547 482 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-214ENST00000588118 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
DNMT1-214ENST00000588118 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 KRT27Q7Z3Y8 459 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
DNMT1-214ENST00000588118 A1BGP04217 495 aa17.17■□□□□ 0.34
DNMT1-214ENST00000588118 CYP19A1P11511 503 aaPredicted RBP17.17■□□□□ 0.34
DNMT1-214ENST00000588118 RXRBP28702 533 aa17.17■□□□□ 0.34
DNMT1-214ENST00000588118 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
DNMT1-214ENST00000588118 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
DNMT1-214ENST00000588118 ANKRD13DQ6ZTN6 518 aa17.17■□□□□ 0.34
DNMT1-214ENST00000588118 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
DNMT1-214ENST00000588118 TJP1Q07157 1748 aa17.16■□□□□ 0.34
DNMT1-214ENST00000588118 ATP6V1AP38606 617 aa17.16■□□□□ 0.34
DNMT1-214ENST00000588118 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
DNMT1-214ENST00000588118 SLC4A9Q96Q91 983 aa17.16■□□□□ 0.34
DNMT1-214ENST00000588118 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
DNMT1-214ENST00000588118 GNAI2P04899 355 aa17.14■□□□□ 0.33
DNMT1-214ENST00000588118 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
DNMT1-214ENST00000588118 MEIS3Q99687 375 aa17.14■□□□□ 0.33
DNMT1-214ENST00000588118 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
DNMT1-214ENST00000588118 BTAF1O14981 1849 aa17.13■□□□□ 0.33
DNMT1-214ENST00000588118 IGHDP01880 384 aa17.13■□□□□ 0.33
DNMT1-214ENST00000588118 IL6STP40189 918 aaPredicted RBP17.13■□□□□ 0.33
DNMT1-214ENST00000588118 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
DNMT1-214ENST00000588118 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
DNMT1-214ENST00000588118 SBF2Q86WG5 1849 aa17.12■□□□□ 0.33
DNMT1-214ENST00000588118 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
DNMT1-214ENST00000588118 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
DNMT1-214ENST00000588118 KIF6Q6ZMV9 814 aa17.12■□□□□ 0.33
DNMT1-214ENST00000588118 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
DNMT1-214ENST00000588118 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 371.8 ms