RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	AKAP12	Q02952	1782 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CCDC66	A2RUB6	948 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	EXOSC9	Q06265	439 aa	Known RBP	11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	SSH1	Q8WYL5	1049 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	EMILIN1	Q9Y6C2	1016 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	USP31	Q70CQ4	1352 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CSB-PGBD3	P0DP91	1061 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	MYRIP	Q8NFW9	859 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	NOB1	Q9ULX3	412 aa	Known RBP	11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	SPATA31A6	Q5VVP1	1343 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	MTHFS	P49914	203 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	EVA1C	P58658	441 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	NUCB1	Q02818	461 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CHD1L	Q86WJ1	897 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	TIGD1	Q96MW7	591 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	MON2	Q7Z3U7	1717 aa		11.51	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	KIAA0232	Q92628	1395 aa		11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	COL16A1	Q07092	1604 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	KIF16B	Q96L93	1317 aa		11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	KIAA2012	Q0VF49	1180 aa		11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	STRN4	Q9NRL3	753 aa		11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	MAP3K19	Q56UN5	1328 aa		11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	PSEN1	P49768	467 aa		11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CFAP53	Q96M91	514 aa		11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CCDC9	Q9Y3X0	531 aa	Known RBP	11.5	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	OVOS2	A0A0J9YW53	1432 aa		11.49	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	OVOS2	Q6IE36	1432 aa		11.49	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CLEC17A	Q6ZS10	378 aa		11.49	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	DDX19B	Q9UMR2	479 aa		11.49	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	TTC12	Q9H892	705 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	POLK	Q9UBT6	870 aa		11.49	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	TNNT3	P45378	269 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	LRSAM1	Q6UWE0	723 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	ARHGEF25	Q86VW2	580 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	PDCL2	Q8N4E4	241 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	FAM83G	A6ND36	823 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	U2AF2	P26368	475 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	1e-10	■■■■■ 30.1
CACNA2D4-223	ENST00000588077	ATF7IP	Q6VMQ6	1270 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	WDR63	Q8IWG1	891 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	PIK3C2A	O00443	1686 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	BMP2KL	Q5H9B9	411 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	ZBTB40	Q9NUA8	1239 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	BTG4	Q9NY30	223 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	ZDHHC9	Q9Y397	364 aa		11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	MCM5	P33992	734 aa		11.47	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	HSP90AB2P	Q58FF8	381 aa		11.47	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	BCL2L12	Q9HB09	334 aa		11.47	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	KIF3A	Q9Y496	699 aa		11.47	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	TRERF1	Q96PN7	1200 aa		11.47	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	NRK	Q7Z2Y5	1582 aa		11.46	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	U2SURP	O15042	1029 aa	Known RBP	11.46	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CYP2E1	P05181	493 aa	Predicted RBP	11.46	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.46	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	3e-9	■■■■■ 101.8
CACNA2D4-223	ENST00000588077	NUCB2	P80303	420 aa		11.46	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	NLRP2	Q9NX02	1062 aa		11.46	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	HOXC9	P31274	260 aa		11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	IP6K1	Q92551	441 aa		11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	ALS2	Q96Q42	1657 aa		11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	MED1	Q15648	1581 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	LOC102724159	A0A0B4J2E5	919 aa		11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	PWP2	Q15269	919 aa	Known RBP	11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	TOM1L2	Q6ZVM7	507 aa		11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	GDPD2	Q9HCC8	539 aa		11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	USP25	Q9UHP3	1055 aa		11.45	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	ANKRD24	Q8TF21	1146 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	AXIN2	Q9Y2T1	843 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	KIF20B	Q96Q89	1820 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	FLT4	P35916	1363 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	AATK	Q6ZMQ8	1374 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077		A0A0G2JS52	829 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	PRR29	P0C7W0	189 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	CAPN2	P17655	700 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	HMGN5	P82970	282 aa	Known RBP	11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	USP21	Q9UK80	565 aa		11.44	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	DIAPH1	O60610	1272 aa	Known RBP	11.43	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	PLCB2	Q00722	1185 aa		11.43	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	TMED8	Q6PL24	325 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	AFF2	P51816	1311 aa		11.43	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	NOL8	Q76FK4	1167 aa	Known RBP	11.43	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	TSPYL1	Q9H0U9	437 aa		11.43	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	YY1AP1	Q9H869	796 aa		11.43	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	CPD	O75976	1380 aa		11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	GSPT1	P15170	499 aa	Known RBP	11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	ANKRD26	Q9UPS8	1709 aa		11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	PIBF1	Q8WXW3	757 aa		11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	PRIMPOL	Q96LW4	560 aa		11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	TSPY26P	Q9H489	355 aa		11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	CALCOCO1	Q9P1Z2	691 aa		11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	SLIT3	O75094	1523 aa		11.42	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	ERICH4	A6NGS2	130 aa		11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	CDC45	O75419	566 aa		11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	GABPB1	Q06547	395 aa	Predicted RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms