RNA–Protein interactions for RNA: ENST00000587269.5

SMAD2-208, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 1,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-208ENST00000587269 FMNL2Q96PY5 1086 aa39.29■■■■□ 3.88
SMAD2-208ENST00000587269 C10orf71Q711Q0 1435 aa39.29■■■■□ 3.88
SMAD2-208ENST00000587269 NARFQ9UHQ1 456 aa39.28■■■■□ 3.88
SMAD2-208ENST00000587269 COL15A1P39059 1388 aa39.28■■■■□ 3.88
SMAD2-208ENST00000587269 PXDNLA1KZ92 1463 aa39.26■■■■□ 3.88
SMAD2-208ENST00000587269 A0A087WZG4 1122 aa39.26■■■■□ 3.88
SMAD2-208ENST00000587269 GIGYF1O75420 1035 aaPredicted RBP39.26■■■■□ 3.88
SMAD2-208ENST00000587269 DPEP1P16444 411 aa39.26■■■■□ 3.88
SMAD2-208ENST00000587269 HEG1Q9ULI3 1381 aa39.25■■■■□ 3.87
SMAD2-208ENST00000587269 KIF13BQ9NQT8 1826 aa39.24■■■■□ 3.87
SMAD2-208ENST00000587269 CEMIPQ8WUJ3 1361 aa39.23■■■■□ 3.87
SMAD2-208ENST00000587269 DDR1Q08345 913 aa39.23■■■■□ 3.87
SMAD2-208ENST00000587269 ZNF330Q9Y3S2 320 aaPredicted RBP39.23■■■■□ 3.87
SMAD2-208ENST00000587269 TM4SF1P30408 202 aa39.22■■■■□ 3.87
SMAD2-208ENST00000587269 N4BP2Q86UW6 1770 aaPredicted RBP39.22■■■■□ 3.87
SMAD2-208ENST00000587269 UBR2Q8IWV8 1755 aa39.21■■■■□ 3.87
SMAD2-208ENST00000587269 MCM10Q7L590 875 aa39.21■■■■□ 3.87
SMAD2-208ENST00000587269 POLRMTO00411 1230 aaKnown RBP39.2■■■■□ 3.87
SMAD2-208ENST00000587269 HTATSF1O43719 755 aaKnown RBP39.19■■■■□ 3.86
SMAD2-208ENST00000587269 PIM2Q9P1W9 311 aa39.19■■■■□ 3.86
SMAD2-208ENST00000587269 C1QTNF8P60827 252 aa39.18■■■■□ 3.86
SMAD2-208ENST00000587269 ARHGAP27Q6ZUM4 889 aa39.18■■■■□ 3.86
SMAD2-208ENST00000587269 PNNQ9H307 717 aaKnown RBP39.18■■■■□ 3.86
SMAD2-208ENST00000587269 ATP10DQ9P241 1426 aa39.16■■■■□ 3.86
SMAD2-208ENST00000587269 EIF5P55010 431 aaKnown RBP39.16■■■■□ 3.86
SMAD2-208ENST00000587269 NFIXQ14938 502 aa39.16■■■■□ 3.86
SMAD2-208ENST00000587269 GPBP1L1Q9HC44 474 aaPredicted RBP39.16■■■■□ 3.86
SMAD2-208ENST00000587269 SIPA1L3O60292 1781 aaPredicted RBP39.16■■■■□ 3.86
SMAD2-208ENST00000587269 KCNQ3O43525 872 aa39.14■■■■□ 3.86
SMAD2-208ENST00000587269 DCTN1Q14203 1278 aa39.13■■■■□ 3.85
SMAD2-208ENST00000587269 DALRD3Q5D0E6 543 aaKnown RBP39.13■■■■□ 3.85
SMAD2-208ENST00000587269 IL6STP40189 918 aaPredicted RBP39.12■■■■□ 3.85
SMAD2-208ENST00000587269 BICDL1Q6ZP65 573 aa39.12■■■■□ 3.85
SMAD2-208ENST00000587269 ZNF526Q8TF50 670 aaPredicted RBP39.12■■■■□ 3.85
SMAD2-208ENST00000587269 A1BGP04217 495 aa39.11■■■■□ 3.85
SMAD2-208ENST00000587269 SERPINB2P05120 415 aa39.11■■■■□ 3.85
SMAD2-208ENST00000587269 RALBP1Q15311 655 aa39.1■■■■□ 3.85
SMAD2-208ENST00000587269 TBC1D2BQ9UPU7 963 aa39.1■■■■□ 3.85
SMAD2-208ENST00000587269 SNRPA1P09661 255 aaKnown RBP39.09■■■■□ 3.85
SMAD2-208ENST00000587269 KCNA3P22001 575 aa39.09■■■■□ 3.85
SMAD2-208ENST00000587269 TAF7Q15545 349 aaPredicted RBP39.09■■■■□ 3.85
SMAD2-208ENST00000587269 BCL2L12Q9HB09 334 aa39.09■■■■□ 3.85
SMAD2-208ENST00000587269 KIAA1551Q9HCM1 1747 aa39.09■■■■□ 3.85
SMAD2-208ENST00000587269 CHRNA5P30532 468 aa39.08■■■■□ 3.85
SMAD2-208ENST00000587269 MAPK8IP3Q9UPT6 1336 aa39.08■■■■□ 3.85
SMAD2-208ENST00000587269 DDX10Q13206 875 aaKnown RBP39.07■■■■□ 3.85
SMAD2-208ENST00000587269 USP16Q9Y5T5 823 aa39.05■■■■□ 3.84
SMAD2-208ENST00000587269 SENP3-EIF4A1A0A087X0R7 540 aa39.04■■■■□ 3.84
SMAD2-208ENST00000587269 NPHP1O15259 732 aa39.03■■■■□ 3.84
SMAD2-208ENST00000587269 ADCY9O60503 1353 aa39.03■■■■□ 3.84
SMAD2-208ENST00000587269 PNISRQ8TF01 805 aaKnown RBP39.02■■■■□ 3.84
SMAD2-208ENST00000587269 NFE2L2Q16236 605 aa39■■■■□ 3.83
SMAD2-208ENST00000587269 TBC1D9BQ66K14 1250 aa39■■■■□ 3.83
SMAD2-208ENST00000587269 DZIP3Q86Y13 1208 aaKnown RBP39■■■■□ 3.83
SMAD2-208ENST00000587269 PLEKHF1Q96S99 279 aa38.99■■■■□ 3.83
SMAD2-208ENST00000587269 SETDB2Q96T68 719 aa38.99■■■■□ 3.83
SMAD2-208ENST00000587269 H0YIN7 160 aa38.98■■■■□ 3.83
SMAD2-208ENST00000587269 MIS18AQ9NYP9 233 aa38.98■■■■□ 3.83
SMAD2-208ENST00000587269 AFDNP55196 1824 aaKnown RBP38.98■■■■□ 3.83
SMAD2-208ENST00000587269 BRCA1P38398 1863 aaKnown RBP38.97■■■■□ 3.83
SMAD2-208ENST00000587269 PRAMEF22A3QJZ6 481 aa38.97■■■■□ 3.83
SMAD2-208ENST00000587269 C2CD5Q86YS7 1000 aa38.97■■■■□ 3.83
SMAD2-208ENST00000587269 PIP4K2AP48426 406 aaPredicted RBP38.96■■■■□ 3.83
SMAD2-208ENST00000587269 ZNF652Q9Y2D9 606 aa38.94■■■■□ 3.82
SMAD2-208ENST00000587269 CARMIL3Q8ND23 1372 aa38.94■■■■□ 3.82
SMAD2-208ENST00000587269 ARFGEF1Q9Y6D6 1849 aa38.93■■■■□ 3.82
SMAD2-208ENST00000587269 CAMTA2O94983 1202 aa38.93■■■■□ 3.82
SMAD2-208ENST00000587269 TTLL6Q8N841 843 aa38.93■■■■□ 3.82
SMAD2-208ENST00000587269 PDE6BP35913 854 aa38.92■■■■□ 3.82
SMAD2-208ENST00000587269 C9orf131Q5VYM1 1079 aa38.92■■■■□ 3.82
SMAD2-208ENST00000587269 PDZRN3Q9UPQ7 1066 aa38.92■■■■□ 3.82
SMAD2-208ENST00000587269 NRXN2Q9P2S2 1712 aa38.89■■■■□ 3.82
SMAD2-208ENST00000587269 CNBD1Q8NA66 436 aa38.89■■■■□ 3.82
SMAD2-208ENST00000587269 BRIP1Q9BX63 1249 aa38.89■■■■□ 3.82
SMAD2-208ENST00000587269 DLG5Q8TDM6 1919 aa38.89■■■■□ 3.82
SMAD2-208ENST00000587269 MYBBP1AQ9BQG0 1328 aaKnown RBP38.89■■■■□ 3.82
SMAD2-208ENST00000587269 ST5P78524 1137 aa38.88■■■■□ 3.81
SMAD2-208ENST00000587269 ZNF622Q969S3 477 aaKnown RBP eCLIP38.88■■■■□ 3.81
SMAD2-208ENST00000587269 CLEC4GQ6UXB4 293 aa38.87■■■■□ 3.81
SMAD2-208ENST00000587269 THUMPD2Q9BTF0 503 aaKnown RBP38.87■■■■□ 3.81
SMAD2-208ENST00000587269 SCN7AQ01118 1682 aa38.87■■■■□ 3.81
SMAD2-208ENST00000587269 PRR5LQ6MZQ0 368 aa38.86■■■■□ 3.81
SMAD2-208ENST00000587269 RNF181Q9P0P0 153 aa38.86■■■■□ 3.81
SMAD2-208ENST00000587269 RIPK4P57078 832 aa38.85■■■■□ 3.81
SMAD2-208ENST00000587269 CCDC24Q8N4L8 307 aa38.85■■■■□ 3.81
SMAD2-208ENST00000587269 LMOD3Q0VAK6 560 aa38.82■■■■□ 3.8
SMAD2-208ENST00000587269 WDR43Q15061 677 aaKnown RBP eCLIP38.82■■■■□ 3.8
SMAD2-208ENST00000587269 NBPF5PQ86XG9 351 aaPredicted RBP38.82■■■■□ 3.8
SMAD2-208ENST00000587269 NBPF26B4DH59 902 aa38.81■■■■□ 3.8
SMAD2-208ENST00000587269 NBPF10Q6P3W6 841 aaKnown RBP38.81■■■■□ 3.8
SMAD2-208ENST00000587269 NBPF15Q8N660 670 aa38.81■■■■□ 3.8
SMAD2-208ENST00000587269 EIF4A1P60842 406 aaKnown RBP38.8■■■■□ 3.8
SMAD2-208ENST00000587269 NGEFQ8N5V2 710 aa38.8■■■■□ 3.8
SMAD2-208ENST00000587269 TSPYL4Q9UJ04 414 aa38.79■■■■□ 3.8
SMAD2-208ENST00000587269 NIP7Q9Y221 180 aaKnown RBP eCLIP38.78■■■■□ 3.8
SMAD2-208ENST00000587269 RRP7AQ9Y3A4 280 aaKnown RBP38.78■■■■□ 3.8
SMAD2-208ENST00000587269 KIF3CO14782 793 aa38.76■■■■□ 3.8
SMAD2-208ENST00000587269 TPTE2Q6XPS3 522 aa38.76■■■■□ 3.8
SMAD2-208ENST00000587269 KDM2BQ8NHM5 1336 aa38.75■■■■□ 3.79
SMAD2-208ENST00000587269 RGL2O15211 777 aa38.75■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms