RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
BRCA1-225ENST00000586385 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
BRCA1-225ENST00000586385 HMOX1P09601 288 aa16.22■□□□□ 0.19
BRCA1-225ENST00000586385 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
BRCA1-225ENST00000586385 NARFQ9UHQ1 456 aa16.22■□□□□ 0.19
BRCA1-225ENST00000586385 ZPR1O75312 459 aa16.21■□□□□ 0.19
BRCA1-225ENST00000586385 RASSF7Q02833 373 aa16.21■□□□□ 0.19
BRCA1-225ENST00000586385 COL15A1P39059 1388 aa16.21■□□□□ 0.19
BRCA1-225ENST00000586385 KIF7Q2M1P5 1343 aa16.2■□□□□ 0.18
BRCA1-225ENST00000586385 PER1O15534 1290 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-225ENST00000586385 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
BRCA1-225ENST00000586385 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
BRCA1-225ENST00000586385 NRXN2Q9P2S2 1712 aa16.19■□□□□ 0.18
BRCA1-225ENST00000586385 SERPINB2P05120 415 aa16.18■□□□□ 0.18
BRCA1-225ENST00000586385 FSTL1Q12841 308 aa16.18■□□□□ 0.18
BRCA1-225ENST00000586385 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
BRCA1-225ENST00000586385 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
BRCA1-225ENST00000586385 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
BRCA1-225ENST00000586385 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
BRCA1-225ENST00000586385 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
BRCA1-225ENST00000586385 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
BRCA1-225ENST00000586385 SBF1O95248 1867 aa16.16■□□□□ 0.18
BRCA1-225ENST00000586385 NFKBIEO00221 500 aa16.16■□□□□ 0.18
BRCA1-225ENST00000586385 EIF5P55010 431 aaKnown RBP16.16■□□□□ 0.18
BRCA1-225ENST00000586385 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
BRCA1-225ENST00000586385 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
BRCA1-225ENST00000586385 C16orf71Q8IYS4 520 aaPredicted RBP16.15■□□□□ 0.18
BRCA1-225ENST00000586385 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
BRCA1-225ENST00000586385 DIAPH1O60610 1272 aaKnown RBP16.14■□□□□ 0.17
BRCA1-225ENST00000586385 LMNB1P20700 586 aa16.14■□□□□ 0.17
BRCA1-225ENST00000586385 C2CD5Q86YS7 1000 aa16.14■□□□□ 0.17
BRCA1-225ENST00000586385 IL17REQ8NFR9 667 aa16.14■□□□□ 0.17
BRCA1-225ENST00000586385 ZNF496Q96IT1 587 aaPredicted RBP16.14■□□□□ 0.17
BRCA1-225ENST00000586385 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
BRCA1-225ENST00000586385 POTECB2RU33 542 aa16.13■□□□□ 0.17
BRCA1-225ENST00000586385 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
BRCA1-225ENST00000586385 TBC1D9BQ66K14 1250 aa16.13■□□□□ 0.17
BRCA1-225ENST00000586385 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
BRCA1-225ENST00000586385 TNRC6CQ9HCJ0 1690 aaKnown RBP16.13■□□□□ 0.17
BRCA1-225ENST00000586385 DLEC1Q9Y238 1755 aa16.13■□□□□ 0.17
BRCA1-225ENST00000586385 GLTPD2A6NH11 291 aa16.12■□□□□ 0.17
BRCA1-225ENST00000586385 COL13A1Q5TAT6 717 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-225ENST00000586385 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
BRCA1-225ENST00000586385 CCDC24Q8N4L8 307 aa16.11■□□□□ 0.17
BRCA1-225ENST00000586385 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
BRCA1-225ENST00000586385 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
BRCA1-225ENST00000586385 STARD3NLO95772 234 aa16.1■□□□□ 0.17
BRCA1-225ENST00000586385 PRR5LQ6MZQ0 368 aa16.1■□□□□ 0.17
BRCA1-225ENST00000586385 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
BRCA1-225ENST00000586385 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
BRCA1-225ENST00000586385 H0YIN7 160 aa16.09■□□□□ 0.17
BRCA1-225ENST00000586385 KCNQ3O43525 872 aa16.09■□□□□ 0.17
BRCA1-225ENST00000586385 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
BRCA1-225ENST00000586385 TBC1D2BQ9UPU7 963 aa16.09■□□□□ 0.17
BRCA1-225ENST00000586385 ANKRD31Q8N7Z5 1873 aa16.09■□□□□ 0.17
BRCA1-225ENST00000586385 CEMIPQ8WUJ3 1361 aa16.09■□□□□ 0.17
BRCA1-225ENST00000586385 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
BRCA1-225ENST00000586385 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
BRCA1-225ENST00000586385 TTC5Q8N0Z6 440 aa16.08■□□□□ 0.16
BRCA1-225ENST00000586385 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.16
BRCA1-225ENST00000586385 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
BRCA1-225ENST00000586385 A0A087WZG4 1122 aa16.07■□□□□ 0.16
BRCA1-225ENST00000586385 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
BRCA1-225ENST00000586385 C21orf2O43822 256 aa16.07■□□□□ 0.16
BRCA1-225ENST00000586385 A1BGP04217 495 aa16.07■□□□□ 0.16
BRCA1-225ENST00000586385 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
BRCA1-225ENST00000586385 BRIP1Q9BX63 1249 aa16.07■□□□□ 0.16
BRCA1-225ENST00000586385 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
BRCA1-225ENST00000586385 SIPA1L3O60292 1781 aaPredicted RBP16.06■□□□□ 0.16
BRCA1-225ENST00000586385 TIAM2Q8IVF5 1701 aa16.06■□□□□ 0.16
BRCA1-225ENST00000586385 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
BRCA1-225ENST00000586385 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
BRCA1-225ENST00000586385 ZNF622Q969S3 477 aaKnown RBP eCLIP16.06■□□□□ 0.165e-8■■■□□ 17.3
BRCA1-225ENST00000586385 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
BRCA1-225ENST00000586385 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
BRCA1-225ENST00000586385 TEFQ10587 303 aa16.05■□□□□ 0.16
BRCA1-225ENST00000586385 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
BRCA1-225ENST00000586385 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
BRCA1-225ENST00000586385 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
BRCA1-225ENST00000586385 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
BRCA1-225ENST00000586385 PDE6BP35913 854 aa16.03■□□□□ 0.16
BRCA1-225ENST00000586385 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-225ENST00000586385 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-225ENST00000586385 FMNL2Q96PY5 1086 aa16.03■□□□□ 0.16
BRCA1-225ENST00000586385 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
BRCA1-225ENST00000586385 USP16Q9Y5T5 823 aa16.03■□□□□ 0.16
BRCA1-225ENST00000586385 POTEIP0CG38 1075 aa16.02■□□□□ 0.16
BRCA1-225ENST00000586385 POTEJP0CG39 1038 aa16.02■□□□□ 0.16
BRCA1-225ENST00000586385 SRGNP10124 158 aa16.02■□□□□ 0.16
BRCA1-225ENST00000586385 ERFEQ4G0M1 354 aa16.02■□□□□ 0.16
BRCA1-225ENST00000586385 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
BRCA1-225ENST00000586385 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
BRCA1-225ENST00000586385 STYK1Q6J9G0 422 aa16.01■□□□□ 0.15
BRCA1-225ENST00000586385 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
BRCA1-225ENST00000586385 CNBD1Q8NA66 436 aa16.01■□□□□ 0.15
BRCA1-225ENST00000586385 C7orf43Q8WVR3 580 aa16.01■□□□□ 0.15
BRCA1-225ENST00000586385 FER1L6Q2WGJ9 1857 aa16.01■□□□□ 0.15
BRCA1-225ENST00000586385 CCDC88AQ3V6T2 1871 aa16■□□□□ 0.15
BRCA1-225ENST00000586385 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
BRCA1-225ENST00000586385 HSPA1AP0DMV8 641 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms