RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 FMNL2Q96PY5 1086 aa24.81■■□□□ 1.56
ATG4D-203ENST00000585752 PNNQ9H307 717 aaKnown RBP24.81■■□□□ 1.56
ATG4D-203ENST00000585752 SOS1Q07889 1333 aaPredicted RBP24.81■■□□□ 1.56
ATG4D-203ENST00000585752 ZBTB1Q9Y2K1 713 aa24.8■■□□□ 1.56
ATG4D-203ENST00000585752 COL15A1P39059 1388 aa24.8■■□□□ 1.56
ATG4D-203ENST00000585752 A0A087WZG4 1122 aa24.79■■□□□ 1.56
ATG4D-203ENST00000585752 FKBP8Q14318 412 aa24.79■■□□□ 1.56
ATG4D-203ENST00000585752 ZNF330Q9Y3S2 320 aaPredicted RBP24.79■■□□□ 1.56
ATG4D-203ENST00000585752 MYBBP1AQ9BQG0 1328 aaKnown RBP24.79■■□□□ 1.56
ATG4D-203ENST00000585752 HEG1Q9ULI3 1381 aa24.79■■□□□ 1.56
ATG4D-203ENST00000585752 ZNF496Q96IT1 587 aaPredicted RBP24.78■■□□□ 1.56
ATG4D-203ENST00000585752 NARFQ9UHQ1 456 aa24.78■■□□□ 1.56
ATG4D-203ENST00000585752 A0A0G2JLW4 131 aa24.77■■□□□ 1.56
ATG4D-203ENST00000585752 BCS1LQ9Y276 419 aa24.77■■□□□ 1.56
ATG4D-203ENST00000585752 ANP32CO43423 234 aa24.76■■□□□ 1.55
ATG4D-203ENST00000585752 HTATSF1O43719 755 aaKnown RBP24.76■■□□□ 1.55
ATG4D-203ENST00000585752 MCM10Q7L590 875 aa24.76■■□□□ 1.55
ATG4D-203ENST00000585752 CEMIPQ8WUJ3 1361 aa24.76■■□□□ 1.55
ATG4D-203ENST00000585752 C10orf71Q711Q0 1435 aa24.76■■□□□ 1.55
ATG4D-203ENST00000585752 PRKRIP1Q9H875 184 aaPredicted RBP24.75■■□□□ 1.55
ATG4D-203ENST00000585752 MAPK8IP3Q9UPT6 1336 aa24.75■■□□□ 1.55
ATG4D-203ENST00000585752 DLG5Q8TDM6 1919 aa24.74■■□□□ 1.55
ATG4D-203ENST00000585752 DPEP1P16444 411 aa24.74■■□□□ 1.55
ATG4D-203ENST00000585752 PXDNLA1KZ92 1463 aa24.74■■□□□ 1.55
ATG4D-203ENST00000585752 UTRNP46939 3433 aa24.73■■□□□ 1.55
ATG4D-203ENST00000585752 GIGYF1O75420 1035 aaPredicted RBP24.71■■□□□ 1.55
ATG4D-203ENST00000585752 TM4SF1P30408 202 aa24.71■■□□□ 1.55
ATG4D-203ENST00000585752 DDR1Q08345 913 aa24.71■■□□□ 1.55
ATG4D-203ENST00000585752 DCTN1Q14203 1278 aa24.71■■□□□ 1.55
ATG4D-203ENST00000585752 PIM2Q9P1W9 311 aa24.71■■□□□ 1.55
ATG4D-203ENST00000585752 AFDNP55196 1824 aaKnown RBP24.7■■□□□ 1.55
ATG4D-203ENST00000585752 KIAA1551Q9HCM1 1747 aa24.7■■□□□ 1.54
ATG4D-203ENST00000585752 POLRMTO00411 1230 aaKnown RBP24.7■■□□□ 1.54
ATG4D-203ENST00000585752 IL6STP40189 918 aaPredicted RBP24.7■■□□□ 1.54
ATG4D-203ENST00000585752 KCNQ3O43525 872 aa24.69■■□□□ 1.54
ATG4D-203ENST00000585752 EIF5P55010 431 aaKnown RBP24.69■■□□□ 1.54
ATG4D-203ENST00000585752 TAF7Q15545 349 aaPredicted RBP24.69■■□□□ 1.54
ATG4D-203ENST00000585752 BICDL1Q6ZP65 573 aa24.69■■□□□ 1.54
ATG4D-203ENST00000585752 ARHGAP27Q6ZUM4 889 aa24.69■■□□□ 1.54
ATG4D-203ENST00000585752 BRCA1P38398 1863 aaKnown RBP24.68■■□□□ 1.54
ATG4D-203ENST00000585752 GOLGB1Q14789 3259 aaKnown RBP24.68■■□□□ 1.54
ATG4D-203ENST00000585752 NPHP1O15259 732 aa24.68■■□□□ 1.54
ATG4D-203ENST00000585752 SNRPA1P09661 255 aaKnown RBP24.68■■□□□ 1.54
ATG4D-203ENST00000585752 NFIXQ14938 502 aa24.68■■□□□ 1.54
ATG4D-203ENST00000585752 SERPINB2P05120 415 aa24.67■■□□□ 1.54
ATG4D-203ENST00000585752 PNISRQ8TF01 805 aaKnown RBP24.67■■□□□ 1.54
ATG4D-203ENST00000585752 TBC1D2BQ9UPU7 963 aa24.67■■□□□ 1.54
ATG4D-203ENST00000585752 ARFGEF1Q9Y6D6 1849 aa24.66■■□□□ 1.54
ATG4D-203ENST00000585752 A1BGP04217 495 aa24.66■■□□□ 1.54
ATG4D-203ENST00000585752 DALRD3Q5D0E6 543 aaKnown RBP24.66■■□□□ 1.54
ATG4D-203ENST00000585752 GPBP1L1Q9HC44 474 aaPredicted RBP24.66■■□□□ 1.54
ATG4D-203ENST00000585752 NFE2L2Q16236 605 aa24.65■■□□□ 1.54
ATG4D-203ENST00000585752 ATP10DQ9P241 1426 aa24.65■■□□□ 1.54
ATG4D-203ENST00000585752 ZNF526Q8TF50 670 aaPredicted RBP24.63■■□□□ 1.53
ATG4D-203ENST00000585752 USP16Q9Y5T5 823 aa24.63■■□□□ 1.53
ATG4D-203ENST00000585752 CHRNA5P30532 468 aa24.62■■□□□ 1.53
ATG4D-203ENST00000585752 C1QTNF8P60827 252 aa24.62■■□□□ 1.53
ATG4D-203ENST00000585752 WDR43Q15061 677 aaKnown RBP eCLIP24.62■■□□□ 1.53
ATG4D-203ENST00000585752 DZIP3Q86Y13 1208 aaKnown RBP24.62■■□□□ 1.53
ATG4D-203ENST00000585752 PLEKHF1Q96S99 279 aa24.62■■□□□ 1.53
ATG4D-203ENST00000585752 BCL2L12Q9HB09 334 aa24.62■■□□□ 1.53
ATG4D-203ENST00000585752 SETDB2Q96T68 719 aa24.61■■□□□ 1.53
ATG4D-203ENST00000585752 MIS18AQ9NYP9 233 aa24.61■■□□□ 1.53
ATG4D-203ENST00000585752 SCN7AQ01118 1682 aa24.61■■□□□ 1.53
ATG4D-203ENST00000585752 H0YIN7 160 aa24.6■■□□□ 1.53
ATG4D-203ENST00000585752 KCNA3P22001 575 aa24.6■■□□□ 1.53
ATG4D-203ENST00000585752 TBC1D9BQ66K14 1250 aa24.6■■□□□ 1.53
ATG4D-203ENST00000585752 NRXN2Q9P2S2 1712 aa24.6■■□□□ 1.53
ATG4D-203ENST00000585752 ZNF652Q9Y2D9 606 aa24.59■■□□□ 1.53
ATG4D-203ENST00000585752 PRAMEF22A3QJZ6 481 aa24.58■■□□□ 1.53
ATG4D-203ENST00000585752 C2CD5Q86YS7 1000 aa24.58■■□□□ 1.53
ATG4D-203ENST00000585752 CARMIL3Q8ND23 1372 aa24.57■■□□□ 1.52
ATG4D-203ENST00000585752 PIP4K2AP48426 406 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-203ENST00000585752 RIPK4P57078 832 aa24.57■■□□□ 1.52
ATG4D-203ENST00000585752 LMOD3Q0VAK6 560 aa24.57■■□□□ 1.52
ATG4D-203ENST00000585752 PDZRN3Q9UPQ7 1066 aa24.57■■□□□ 1.52
ATG4D-203ENST00000585752 LAMB4A4D0S4 1761 aa24.57■■□□□ 1.52
ATG4D-203ENST00000585752 SENP3-EIF4A1A0A087X0R7 540 aa24.56■■□□□ 1.52
ATG4D-203ENST00000585752 PDE6BP35913 854 aa24.56■■□□□ 1.52
ATG4D-203ENST00000585752 BCORQ6W2J9 1755 aa24.56■■□□□ 1.52
ATG4D-203ENST00000585752 KDM3BQ7LBC6 1761 aa24.55■■□□□ 1.52
ATG4D-203ENST00000585752 ST5P78524 1137 aa24.55■■□□□ 1.52
ATG4D-203ENST00000585752 ADCY9O60503 1353 aa24.54■■□□□ 1.52
ATG4D-203ENST00000585752 DLEC1Q9Y238 1755 aa24.54■■□□□ 1.52
ATG4D-203ENST00000585752 CAMTA2O94983 1202 aa24.54■■□□□ 1.52
ATG4D-203ENST00000585752 CNBD1Q8NA66 436 aa24.54■■□□□ 1.52
ATG4D-203ENST00000585752 THUMPD2Q9BTF0 503 aaKnown RBP24.54■■□□□ 1.52
ATG4D-203ENST00000585752 CLEC4GQ6UXB4 293 aa24.53■■□□□ 1.52
ATG4D-203ENST00000585752 TTLL6Q8N841 843 aa24.53■■□□□ 1.52
ATG4D-203ENST00000585752 ZNF622Q969S3 477 aaKnown RBP eCLIP24.53■■□□□ 1.52
ATG4D-203ENST00000585752 BRIP1Q9BX63 1249 aa24.52■■□□□ 1.52
ATG4D-203ENST00000585752 TSPYL4Q9UJ04 414 aa24.52■■□□□ 1.52
ATG4D-203ENST00000585752 C9orf131Q5VYM1 1079 aa24.51■■□□□ 1.51
ATG4D-203ENST00000585752 NBPF5PQ86XG9 351 aaPredicted RBP24.51■■□□□ 1.51
ATG4D-203ENST00000585752 NGEFQ8N5V2 710 aa24.51■■□□□ 1.51
ATG4D-203ENST00000585752 MRS2Q9HD23 443 aa24.51■■□□□ 1.51
ATG4D-203ENST00000585752 NEUROD2Q15784 382 aa24.5■■□□□ 1.51
ATG4D-203ENST00000585752 PRR5LQ6MZQ0 368 aa24.5■■□□□ 1.51
ATG4D-203ENST00000585752 SBF1O95248 1867 aa24.49■■□□□ 1.51
ATG4D-203ENST00000585752 ANKRD31Q8N7Z5 1873 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms