RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
CDK5RAP3-236ENST00000584991 G2E3Q7L622 706 aa18.8■□□□□ 0.6
CDK5RAP3-236ENST00000584991 MARCH10Q8NA82 808 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-236ENST00000584991 DDX19BQ9UMR2 479 aa18.8■□□□□ 0.6
CDK5RAP3-236ENST00000584991 C5P01031 1676 aa18.79■□□□□ 0.6
CDK5RAP3-236ENST00000584991 TMEM57Q8N5G2 664 aa18.79■□□□□ 0.6
CDK5RAP3-236ENST00000584991 FMNL2Q96PY5 1086 aa18.79■□□□□ 0.6
CDK5RAP3-236ENST00000584991 API5Q9BZZ5 524 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-236ENST00000584991 PAPPAQ13219 1627 aa18.79■□□□□ 0.6
CDK5RAP3-236ENST00000584991 DOT1LQ8TEK3 1739 aa18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 GLI3P10071 1580 aa18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 A0A0G2JS52 829 aa18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 CHMP4AQ9BY43 222 aa18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 PTPRCP08575 1304 aa18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
CDK5RAP3-236ENST00000584991 PIGBQ92521 554 aa18.77■□□□□ 0.6
CDK5RAP3-236ENST00000584991 TRPC5Q9UL62 973 aaPredicted RBP18.77■□□□□ 0.6
CDK5RAP3-236ENST00000584991 ATRNO75882 1429 aa18.77■□□□□ 0.6
CDK5RAP3-236ENST00000584991 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
CDK5RAP3-236ENST00000584991 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
CDK5RAP3-236ENST00000584991 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
CDK5RAP3-236ENST00000584991 ABCC4O15439 1325 aa18.76■□□□□ 0.59
CDK5RAP3-236ENST00000584991 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 PDZRN3Q9UPQ7 1066 aa18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 THSD7AQ9UPZ6 1657 aa18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 RGS12O14924 1447 aa18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 PRIM1P49642 420 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 FLIIQ13045 1269 aa18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 GSE1Q14687 1217 aa18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 BCL9O00512 1426 aa18.75■□□□□ 0.59
CDK5RAP3-236ENST00000584991 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
CDK5RAP3-236ENST00000584991 ANXA1P04083 346 aa18.74■□□□□ 0.59
CDK5RAP3-236ENST00000584991 PHAXQ9H814 394 aaKnown RBP18.74■□□□□ 0.59
CDK5RAP3-236ENST00000584991 QTRT2Q9H974 415 aaKnown RBP18.74■□□□□ 0.59
CDK5RAP3-236ENST00000584991 ASAP1Q9ULH1 1129 aa18.74■□□□□ 0.59
CDK5RAP3-236ENST00000584991 PTCD1O75127 700 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP3-236ENST00000584991 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
CDK5RAP3-236ENST00000584991 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-236ENST00000584991 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
CDK5RAP3-236ENST00000584991 FKBP5Q13451 457 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-236ENST00000584991 ATG3Q9NT62 314 aa18.73■□□□□ 0.59
CDK5RAP3-236ENST00000584991 LAMB4A4D0S4 1761 aa18.72■□□□□ 0.59
CDK5RAP3-236ENST00000584991 F6X3S4 739 aa18.71■□□□□ 0.59
CDK5RAP3-236ENST00000584991 PROSER3Q2NL68 480 aa18.71■□□□□ 0.59
CDK5RAP3-236ENST00000584991 TBC1D32Q96NH3 1257 aa18.71■□□□□ 0.59
CDK5RAP3-236ENST00000584991 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
CDK5RAP3-236ENST00000584991 PDIA6Q15084 440 aa18.7■□□□□ 0.58
CDK5RAP3-236ENST00000584991 FBXO41Q8TF61 875 aa18.7■□□□□ 0.58
CDK5RAP3-236ENST00000584991 DDX21Q9NR30 783 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDK5RAP3-236ENST00000584991 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-236ENST00000584991 INTS3Q68E01 1043 aaKnown RBP18.69■□□□□ 0.58
CDK5RAP3-236ENST00000584991 SMC5Q8IY18 1101 aa18.69■□□□□ 0.58
CDK5RAP3-236ENST00000584991 SLC4A10Q6U841 1118 aa18.69■□□□□ 0.58
CDK5RAP3-236ENST00000584991 RBM42Q9BTD8 480 aaKnown RBP18.68■□□□□ 0.58
CDK5RAP3-236ENST00000584991 HYPKQ9NX55 129 aa18.68■□□□□ 0.58
CDK5RAP3-236ENST00000584991 ZBTB7BO15156 539 aaPredicted RBP18.67■□□□□ 0.58
CDK5RAP3-236ENST00000584991 SEC24BO95487 1268 aa18.67■□□□□ 0.58
CDK5RAP3-236ENST00000584991 MYL6BP14649 208 aa18.67■□□□□ 0.58
CDK5RAP3-236ENST00000584991 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
CDK5RAP3-236ENST00000584991 KCNQ2O43526 872 aa18.67■□□□□ 0.58
CDK5RAP3-236ENST00000584991 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
CDK5RAP3-236ENST00000584991 ZBTB40Q9NUA8 1239 aa18.67■□□□□ 0.58
CDK5RAP3-236ENST00000584991 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
CDK5RAP3-236ENST00000584991 VSIG10Q8N0Z9 540 aa18.65■□□□□ 0.58
CDK5RAP3-236ENST00000584991 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-236ENST00000584991 ZNF772Q68DY9 489 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP3-236ENST00000584991 PI4KAP2A4QPH2 592 aa18.64■□□□□ 0.57
CDK5RAP3-236ENST00000584991 AIMP1Q12904 312 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-236ENST00000584991 DNAJC10Q8IXB1 793 aa18.64■□□□□ 0.57
CDK5RAP3-236ENST00000584991 PI4KAP1Q8N8J0 262 aa18.64■□□□□ 0.57
CDK5RAP3-236ENST00000584991 A1BGP04217 495 aa18.63■□□□□ 0.57
CDK5RAP3-236ENST00000584991 SLC4A9Q96Q91 983 aa18.63■□□□□ 0.57
CDK5RAP3-236ENST00000584991 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-236ENST00000584991 N4BP2Q86UW6 1770 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-236ENST00000584991 ADCY9O60503 1353 aa18.63■□□□□ 0.57
CDK5RAP3-236ENST00000584991 LRP10Q7Z4F1 713 aa18.63■□□□□ 0.57
CDK5RAP3-236ENST00000584991 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 PXDNLA1KZ92 1463 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 COPS6Q7L5N1 327 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 XAGE3Q8WTP9 111 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 DNAAF4Q8WXU2 420 aa18.62■□□□□ 0.57
CDK5RAP3-236ENST00000584991 BRWD3Q6RI45 1802 aa18.61■□□□□ 0.57
CDK5RAP3-236ENST00000584991 DDX58O95786 925 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-236ENST00000584991 KSR2Q6VAB6 950 aa18.61■□□□□ 0.57
CDK5RAP3-236ENST00000584991 MAP3K2Q9Y2U5 619 aa18.61■□□□□ 0.57
CDK5RAP3-236ENST00000584991 C1orf115Q9H7X2 142 aa18.6■□□□□ 0.57
CDK5RAP3-236ENST00000584991 SBF2Q86WG5 1849 aa18.6■□□□□ 0.57
CDK5RAP3-236ENST00000584991 RBM6P78332 1123 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-236ENST00000584991 MEIS3Q99687 375 aa18.6■□□□□ 0.57
CDK5RAP3-236ENST00000584991 TJP1Q07157 1748 aa18.6■□□□□ 0.57
CDK5RAP3-236ENST00000584991 NHSQ6T4R5 1651 aa18.59■□□□□ 0.57
CDK5RAP3-236ENST00000584991 EIF5BO60841 1220 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-236ENST00000584991 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms