RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 C9orf131Q5VYM1 1079 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 DCAF5Q96JK2 942 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 MRC1P22897 1456 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 DLG5Q8TDM6 1919 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 KCPQ6ZWJ8 1503 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
CCDC84-209ENST00000580556 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
CCDC84-209ENST00000580556 BRCA1P38398 1863 aaKnown RBP15.93■□□□□ 0.14
CCDC84-209ENST00000580556 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
CCDC84-209ENST00000580556 RIPK4P57078 832 aa15.93■□□□□ 0.14
CCDC84-209ENST00000580556 SCN11AQ9UI33 1791 aa15.92■□□□□ 0.14
CCDC84-209ENST00000580556 KCNA3P22001 575 aa15.92■□□□□ 0.14
CCDC84-209ENST00000580556 C16orf71Q8IYS4 520 aaPredicted RBP15.92■□□□□ 0.14
CCDC84-209ENST00000580556 PRELPP51888 382 aa15.91■□□□□ 0.14
CCDC84-209ENST00000580556 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
CCDC84-209ENST00000580556 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
CCDC84-209ENST00000580556 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
CCDC84-209ENST00000580556 TMOD3Q9NYL9 352 aa15.91■□□□□ 0.14
CCDC84-209ENST00000580556 ERVV-2B6SEH9 535 aa15.9■□□□□ 0.14
CCDC84-209ENST00000580556 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
CCDC84-209ENST00000580556 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
CCDC84-209ENST00000580556 RRP7AQ9Y3A4 280 aaKnown RBP15.9■□□□□ 0.14
CCDC84-209ENST00000580556 C4AP0C0L4 1744 aa15.9■□□□□ 0.14
CCDC84-209ENST00000580556 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
CCDC84-209ENST00000580556 FSTL1Q12841 308 aa15.89■□□□□ 0.13
CCDC84-209ENST00000580556 TRAPPC3LQ5T215 181 aa15.89■□□□□ 0.13
CCDC84-209ENST00000580556 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
CCDC84-209ENST00000580556 ARHGEF1Q92888 912 aaKnown RBP15.89■□□□□ 0.13
CCDC84-209ENST00000580556 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
CCDC84-209ENST00000580556 GYS1P13807 737 aa15.88■□□□□ 0.13
CCDC84-209ENST00000580556 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
CCDC84-209ENST00000580556 NLGN1Q8N2Q7 840 aa15.88■□□□□ 0.13
CCDC84-209ENST00000580556 RTCBQ9Y3I0 505 aaKnown RBP15.88■□□□□ 0.13
CCDC84-209ENST00000580556 ARFGEF1Q9Y6D6 1849 aa15.88■□□□□ 0.13
CCDC84-209ENST00000580556 SIPA1L3O60292 1781 aaPredicted RBP15.87■□□□□ 0.13
CCDC84-209ENST00000580556 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
CCDC84-209ENST00000580556 CALD1Q05682 793 aaKnown RBP15.87■□□□□ 0.13
CCDC84-209ENST00000580556 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
CCDC84-209ENST00000580556 ZNF521Q96K83 1311 aa15.87■□□□□ 0.13
CCDC84-209ENST00000580556 MCM10Q7L590 875 aa15.86■□□□□ 0.13
CCDC84-209ENST00000580556 WWC1Q8IX03 1113 aa15.86■□□□□ 0.13
CCDC84-209ENST00000580556 SLC52A2Q9HAB3 445 aa15.86■□□□□ 0.13
CCDC84-209ENST00000580556 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
CCDC84-209ENST00000580556 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC84-209ENST00000580556 TEFQ10587 303 aa15.85■□□□□ 0.13
CCDC84-209ENST00000580556 WDR63Q8IWG1 891 aa15.85■□□□□ 0.13
CCDC84-209ENST00000580556 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
CCDC84-209ENST00000580556 PIM2Q9P1W9 311 aa15.85■□□□□ 0.13
CCDC84-209ENST00000580556 PARP3Q9Y6F1 533 aa15.85■□□□□ 0.13
CCDC84-209ENST00000580556 IL16Q14005 1332 aa15.85■□□□□ 0.13
CCDC84-209ENST00000580556 KDM2BQ8NHM5 1336 aa15.85■□□□□ 0.13
CCDC84-209ENST00000580556 SBF1O95248 1867 aa15.84■□□□□ 0.13
CCDC84-209ENST00000580556 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
CCDC84-209ENST00000580556 HSPA1AP0DMV8 641 aaKnown RBP15.84■□□□□ 0.13
CCDC84-209ENST00000580556 HSPA1BP0DMV9 641 aaKnown RBP15.84■□□□□ 0.13
CCDC84-209ENST00000580556 CHRNA5P30532 468 aa15.84■□□□□ 0.13
CCDC84-209ENST00000580556 DCTN1Q14203 1278 aa15.84■□□□□ 0.13
CCDC84-209ENST00000580556 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
CCDC84-209ENST00000580556 COL5A3P25940 1745 aaPredicted RBP15.84■□□□□ 0.13
CCDC84-209ENST00000580556 ZBED9Q6R2W3 1325 aa15.84■□□□□ 0.13
CCDC84-209ENST00000580556 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.13
CCDC84-209ENST00000580556 RFC4P35249 363 aa15.83■□□□□ 0.12
CCDC84-209ENST00000580556 CABP4P57796 275 aa15.83■□□□□ 0.12
CCDC84-209ENST00000580556 DALRD3Q5D0E6 543 aaKnown RBP15.83■□□□□ 0.12
CCDC84-209ENST00000580556 SRP68Q9UHB9 627 aaKnown RBP15.83■□□□□ 0.12
CCDC84-209ENST00000580556 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
CCDC84-209ENST00000580556 DDR1Q08345 913 aa15.82■□□□□ 0.12
CCDC84-209ENST00000580556 TAF7Q15545 349 aaPredicted RBP15.82■□□□□ 0.12
CCDC84-209ENST00000580556 NFATC2IPQ8NCF5 419 aa15.82■□□□□ 0.12
CCDC84-209ENST00000580556 SMC1BQ8NDV3 1235 aa15.82■□□□□ 0.12
CCDC84-209ENST00000580556 THUMPD2Q9BTF0 503 aaKnown RBP15.82■□□□□ 0.12
CCDC84-209ENST00000580556 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
CCDC84-209ENST00000580556 RASSF7Q02833 373 aa15.81■□□□□ 0.12
CCDC84-209ENST00000580556 FKBP8Q14318 412 aa15.81■□□□□ 0.12
CCDC84-209ENST00000580556 RC3H1Q5TC82 1133 aaKnown RBP15.81■□□□□ 0.12
CCDC84-209ENST00000580556 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
CCDC84-209ENST00000580556 KDM3BQ7LBC6 1761 aa15.8■□□□□ 0.12
CCDC84-209ENST00000580556 CNTNAP4Q9C0A0 1308 aa15.8■□□□□ 0.12
CCDC84-209ENST00000580556 ZNF853P0CG23 659 aa15.8■□□□□ 0.12
CCDC84-209ENST00000580556 ADRA2BP18089 450 aa15.8■□□□□ 0.12
CCDC84-209ENST00000580556 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
CCDC84-209ENST00000580556 CHL1O00533 1208 aa15.79■□□□□ 0.12
CCDC84-209ENST00000580556 GNAI1P63096 354 aa15.79■□□□□ 0.12
CCDC84-209ENST00000580556 UBR2Q8IWV8 1755 aa15.79■□□□□ 0.12
CCDC84-209ENST00000580556 ZNF831Q5JPB2 1677 aa15.79■□□□□ 0.12
CCDC84-209ENST00000580556 BTBD11A6QL63 1104 aa15.78■□□□□ 0.12
CCDC84-209ENST00000580556 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
CCDC84-209ENST00000580556 E9PSI1 815 aa15.77■□□□□ 0.12
CCDC84-209ENST00000580556 ZNF790Q6PG37 636 aa15.77■□□□□ 0.12
CCDC84-209ENST00000580556 MYH16Q9H6N6 1097 aa15.76■□□□□ 0.11
CCDC84-209ENST00000580556 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
CCDC84-209ENST00000580556 USP42Q9H9J4 1324 aaKnown RBP15.75■□□□□ 0.11
CCDC84-209ENST00000580556 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
CCDC84-209ENST00000580556 PTCD1O75127 700 aaKnown RBP15.75■□□□□ 0.11
CCDC84-209ENST00000580556 CRKLP46109 303 aaKnown RBP15.75■□□□□ 0.11
CCDC84-209ENST00000580556 TTC5Q8N0Z6 440 aa15.75■□□□□ 0.11
CCDC84-209ENST00000580556 VEGFAP15692 232 aaPredicted RBP15.74■□□□□ 0.11
CCDC84-209ENST00000580556 SLFN5Q08AF3 891 aa15.74■□□□□ 0.11
CCDC84-209ENST00000580556 MBIPQ9NS73 344 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms