RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 ATP2B2Q01814 1243 aa6.55□□□□□ -1.36
BRIP1-202ENST00000577598 TTC39BQ5VTQ0 682 aaPredicted RBP6.55□□□□□ -1.36
BRIP1-202ENST00000577598 NGLY1Q96IV0 654 aa6.55□□□□□ -1.36
BRIP1-202ENST00000577598 TPX2Q9ULW0 747 aaKnown RBP6.55□□□□□ -1.36
BRIP1-202ENST00000577598 TNFRSF10BO14763 440 aa6.55□□□□□ -1.36
BRIP1-202ENST00000577598 SCGB1D2O95969 90 aa6.55□□□□□ -1.36
BRIP1-202ENST00000577598 TKFCQ3LXA3 575 aa6.55□□□□□ -1.36
BRIP1-202ENST00000577598 SH3TC2Q8TF17 1288 aa6.55□□□□□ -1.36
BRIP1-202ENST00000577598 ZBTB3Q9H5J0 574 aa6.55□□□□□ -1.36
BRIP1-202ENST00000577598 THRAP3Q9Y2W1 955 aaKnown RBP6.55□□□□□ -1.36
BRIP1-202ENST00000577598 TMEM127O75204 238 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
BRIP1-202ENST00000577598 AGERQ15109 404 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 ZNF408Q9H9D4 720 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 BDNFP23560 247 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
BRIP1-202ENST00000577598 MAATS1Q7Z4T9 603 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 NPDC1Q9NQX5 325 aaPredicted RBP6.54□□□□□ -1.36
BRIP1-202ENST00000577598 VPS45Q9NRW7 570 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 CHMP3Q9Y3E7 222 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 RCCD1A6NED2 376 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 COPRSQ9NQ92 184 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 COMMD10Q9Y6G5 202 aa6.54□□□□□ -1.36
BRIP1-202ENST00000577598 CFAP99D6REC4 459 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 MYCLP1P12525 358 aaPredicted RBP6.53□□□□□ -1.36
BRIP1-202ENST00000577598 NASPP49321 788 aaPredicted RBP6.53□□□□□ -1.36
BRIP1-202ENST00000577598 GYS2P54840 703 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 PAK2Q13177 524 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 PAK3O75914 559 aaPredicted RBP6.53□□□□□ -1.36
BRIP1-202ENST00000577598 CLDN10P78369 228 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 ANKS3Q6ZW76 656 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 IL17RAQ96F46 866 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 RPS6KL1Q9Y6S9 549 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 CD53P19397 219 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 STRN3Q13033 797 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 ZKSCAN2Q63HK3 967 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 MCF2L2Q86YR7 1114 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 FLCNQ8NFG4 579 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 TSKSQ9UJT2 592 aa6.53□□□□□ -1.36
BRIP1-202ENST00000577598 PRPF3O43395 683 aaKnown RBP6.52□□□□□ -1.37
BRIP1-202ENST00000577598 AGR2O95994 175 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
BRIP1-202ENST00000577598 PXYLP1Q8TE99 480 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 DNAJC7Q99615 494 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 NDUFB5O43674 189 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 ERCC3P19447 782 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 ETFBP38117 255 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 RAB27AP51159 221 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 ANKRD42Q8N9B4 389 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 ASB16Q96NS5 453 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 ADAM33Q9BZ11 813 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 RBSNQ9H1K0 784 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 PCDHGC3Q9UN70 934 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 ICMTO60725 284 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 SCLT1Q96NL6 688 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 AASDHPPTQ9NRN7 309 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 CD2APQ9Y5K6 639 aa6.52□□□□□ -1.37
BRIP1-202ENST00000577598 PDGFRBP09619 1106 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 APLP1P51693 650 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 FKBP4Q02790 459 aaKnown RBP eCLIP6.51□□□□□ -1.37
BRIP1-202ENST00000577598 PTK7Q13308 1070 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 ORC1Q13415 861 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 PPP1R14AQ96A00 147 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 ATG3Q9NT62 314 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 V9GY48 417 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-202ENST00000577598 C21orf2O43822 256 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 CDKN1CP49918 316 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-202ENST00000577598 CCDC102BQ68D86 513 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 KIF12Q96FN5 646 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 MAGEC2Q9UBF1 373 aaPredicted RBP6.51□□□□□ -1.37
BRIP1-202ENST00000577598 FRMD4BQ9Y2L6 1034 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 LEMD3Q9Y2U8 911 aa6.51□□□□□ -1.37
BRIP1-202ENST00000577598 GGT6Q6P531 493 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 PNMA1Q8ND90 353 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 MYRIPQ8NFW9 859 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 CXorf38Q8TB03 319 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 MAP10Q9P2G4 905 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 ALDH1L1O75891 902 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 BPNT1O95861 308 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
BRIP1-202ENST00000577598 L3MBTL3Q96JM7 780 aaPredicted RBP6.5□□□□□ -1.37
BRIP1-202ENST00000577598 CNNM4Q6P4Q7 775 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 MICALL2Q8IY33 904 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 APOL5Q9BWW9 433 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 LILRB3O75022 631 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 EHHADHQ08426 723 aa6.5□□□□□ -1.37
BRIP1-202ENST00000577598 ARHGAP4P98171 946 aa6.49□□□□□ -1.37
BRIP1-202ENST00000577598 TTF1Q15361 905 aaPredicted RBP6.49□□□□□ -1.37
BRIP1-202ENST00000577598 DIXDC1Q155Q3 683 aa6.49□□□□□ -1.37
BRIP1-202ENST00000577598 DEPDC7Q96QD5 511 aa6.49□□□□□ -1.37
BRIP1-202ENST00000577598 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.49□□□□□ -1.37
BRIP1-202ENST00000577598 DPF3Q92784 378 aa6.49□□□□□ -1.37
BRIP1-202ENST00000577598 SAP130Q9H0E3 1048 aa6.49□□□□□ -1.37
BRIP1-202ENST00000577598 MPHOSPH10O00566 681 aaKnown RBP6.49□□□□□ -1.37
BRIP1-202ENST00000577598 UBA5Q9GZZ9 404 aa6.49□□□□□ -1.37
BRIP1-202ENST00000577598 DNAAF2Q9NVR5 837 aaKnown RBP6.49□□□□□ -1.37
BRIP1-202ENST00000577598 PPT2Q9UMR5 302 aa6.49□□□□□ -1.37
BRIP1-202ENST00000577598 ELL2O00472 640 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms