RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 A0A1W2PP64 1363 aa21.06■□□□□ 0.96
ATPAF1-214ENST00000576409 HOOK1Q9UJC3 728 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-214ENST00000576409 TRMT2AQ8IZ69 625 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-214ENST00000576409 GADD45BO75293 160 aaPredicted RBP21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 USP19O94966 1318 aa21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 MCM5P33992 734 aa21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 EIF4A2Q14240 407 aaKnown RBP21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 HSP90B2PQ58FF3 399 aa21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 NUP160Q12769 1436 aa21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 ERICH2A1L162 156 aa21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 AK2P54819 239 aa21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 LMBRD1Q9NUN5 540 aa21.05■□□□□ 0.96
ATPAF1-214ENST00000576409 RAD21O60216 631 aa21.04■□□□□ 0.96
ATPAF1-214ENST00000576409 HSP90AA4PQ58FG1 418 aa21.04■□□□□ 0.96
ATPAF1-214ENST00000576409 UBXN4Q92575 508 aa21.04■□□□□ 0.96
ATPAF1-214ENST00000576409 SH2B1Q9NRF2 756 aaPredicted RBP21.04■□□□□ 0.96
ATPAF1-214ENST00000576409 NSD2O96028 1365 aa21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 CCDC66A2RUB6 948 aa21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 POLR3GO15318 223 aaPredicted RBP21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 POLR3DP05423 398 aaPredicted RBP21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 URI1O94763 535 aaPredicted RBP21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 GSPT1P15170 499 aaKnown RBP21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 ANO6Q4KMQ2 910 aa21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 ANKRD20A12PQ8NF67 263 aa21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 SFPQP23246 707 aaKnown RBP eCLIP21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 VPS53Q5VIR6 699 aa21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 SNRKQ9NRH2 765 aa21.03■□□□□ 0.96
ATPAF1-214ENST00000576409 ACEP12821 1306 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 CHMLP26374 656 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 DNAJC25Q9H1X3 360 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 PTCD1O75127 700 aaKnown RBP21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 MYD88Q99836 296 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 SYT1P21579 422 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 PTGS1P23219 599 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 PIP4K2AP48426 406 aaPredicted RBP21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 HAND2P61296 217 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 PIBF1Q8WXW3 757 aa21.02■□□□□ 0.96
ATPAF1-214ENST00000576409 VPS37DQ86XT2 251 aa21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 FSIP1Q8NA03 581 aa21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 MAP3K2Q9Y2U5 619 aa21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 ATP5J2-PTCD1G3V325 749 aa21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 CEBPAP49715 358 aaPredicted RBP21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 NAP1L1P55209 391 aaKnown RBP21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 LUZP1Q86V48 1076 aa21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 MTHFSDQ2M296 383 aaKnown RBP21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 NUP133Q8WUM0 1156 aa21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 NOL7Q9UMY1 257 aaKnown RBP21.01■□□□□ 0.95
ATPAF1-214ENST00000576409 BRF1Q92994 677 aa21■□□□□ 0.95
ATPAF1-214ENST00000576409 TTC39AQ5SRH9 613 aa21■□□□□ 0.95
ATPAF1-214ENST00000576409 KIF18AQ8NI77 898 aa21■□□□□ 0.95
ATPAF1-214ENST00000576409 F13A1P00488 732 aa21■□□□□ 0.95
ATPAF1-214ENST00000576409 CHPF2Q9P2E5 772 aa21■□□□□ 0.95
ATPAF1-214ENST00000576409 PHAXQ9H814 394 aaKnown RBP21■□□□□ 0.95
ATPAF1-214ENST00000576409 RBM8AQ9Y5S9 174 aaKnown RBP21■□□□□ 0.95
ATPAF1-214ENST00000576409 ATP8B2P98198 1209 aa20.99■□□□□ 0.95
ATPAF1-214ENST00000576409 DDX46Q7L014 1031 aaKnown RBP20.99■□□□□ 0.95
ATPAF1-214ENST00000576409 FANCAO15360 1455 aa20.99■□□□□ 0.95
ATPAF1-214ENST00000576409 KRT32Q14532 448 aa20.99■□□□□ 0.95
ATPAF1-214ENST00000576409 KLHL10Q6JEL2 608 aa20.99■□□□□ 0.95
ATPAF1-214ENST00000576409 ZSWIM4Q9H7M6 989 aa20.99■□□□□ 0.95
ATPAF1-214ENST00000576409 CCDC158Q5M9N0 1113 aa20.98■□□□□ 0.95
ATPAF1-214ENST00000576409 CEP126Q9P2H0 1117 aa20.98■□□□□ 0.95
ATPAF1-214ENST00000576409 FSD2A1L4K1 749 aa20.98■□□□□ 0.95
ATPAF1-214ENST00000576409 IDH1O75874 414 aaKnown RBP20.98■□□□□ 0.95
ATPAF1-214ENST00000576409 CD109Q6YHK3 1445 aa20.97■□□□□ 0.95
ATPAF1-214ENST00000576409 PNMA6EA0A0J9YXQ4 647 aa20.97■□□□□ 0.95
ATPAF1-214ENST00000576409 CNNM1Q9NRU3 951 aa20.97■□□□□ 0.95
ATPAF1-214ENST00000576409 TMC6Q7Z403 805 aa20.97■□□□□ 0.95
ATPAF1-214ENST00000576409 PRIMPOLQ96LW4 560 aa20.97■□□□□ 0.95
ATPAF1-214ENST00000576409 PATL2C9JE40 543 aaKnown RBP20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 CPLX3Q8WVH0 158 aa20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 ANO10Q9NW15 660 aa20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 MSH6P52701 1360 aa20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 DISP1Q96F81 1524 aa20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 UVSSAQ2YD98 709 aa20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 CHST3Q7LGC8 479 aa20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 ZFP91Q96JP5 570 aaPredicted RBP20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 PALD1Q9ULE6 856 aa20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
ATPAF1-214ENST00000576409 GOLIM4O00461 696 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 CCAR1Q8IX12 1150 aaKnown RBP20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 CCDC144CPQ8IYA2 1237 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 FAM200AQ8TCP9 573 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 DDX19AQ9NUU7 478 aaKnown RBP20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 UBE3BQ7Z3V4 1068 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 CAGE1Q8TC20 777 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 CABP4P57796 275 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 JMYQ8N9B5 988 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 EVI5LQ96CN4 794 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 STRN4Q9NRL3 753 aa20.95■□□□□ 0.94
ATPAF1-214ENST00000576409 ZNF445P59923 1031 aa20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 DBF4Q9UBU7 674 aaPredicted RBP20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 TBC1D2BQ9UPU7 963 aa20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 CCDC57Q2TAC2 916 aa20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 CWF19L2Q2TBE0 894 aaKnown RBP20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 C8orf76Q96K31 380 aa20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 SKILP12757 684 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms