RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
NPLOC4-211ENST00000573212 KDRP35968 1356 aa11.24□□□□□ -0.61
NPLOC4-211ENST00000573212 PLEKHG2Q9H7P9 1386 aa11.24□□□□□ -0.61
NPLOC4-211ENST00000573212 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
NPLOC4-211ENST00000573212 DPEP1P16444 411 aa11.23□□□□□ -0.61
NPLOC4-211ENST00000573212 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
NPLOC4-211ENST00000573212 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-211ENST00000573212 ITGB4P16144 1822 aa11.23□□□□□ -0.61
NPLOC4-211ENST00000573212 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
NPLOC4-211ENST00000573212 CNTNAP4Q9C0A0 1308 aa11.22□□□□□ -0.61
NPLOC4-211ENST00000573212 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
NPLOC4-211ENST00000573212 C10orf71Q711Q0 1435 aa11.21□□□□□ -0.61
NPLOC4-211ENST00000573212 FCHSD2O94868 740 aa11.21□□□□□ -0.61
NPLOC4-211ENST00000573212 PYGBP11216 843 aa11.21□□□□□ -0.61
NPLOC4-211ENST00000573212 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
NPLOC4-211ENST00000573212 NMRK2Q9NPI5 230 aa11.21□□□□□ -0.61
NPLOC4-211ENST00000573212 HSP90AB1P08238 724 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-211ENST00000573212 RFC4P35249 363 aa11.2□□□□□ -0.62
NPLOC4-211ENST00000573212 RBM46Q8TBY0 533 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-211ENST00000573212 PARP3Q9Y6F1 533 aa11.2□□□□□ -0.62
NPLOC4-211ENST00000573212 TM4SF1P30408 202 aa11.19□□□□□ -0.62
NPLOC4-211ENST00000573212 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-211ENST00000573212 C9orf131Q5VYM1 1079 aa11.19□□□□□ -0.62
NPLOC4-211ENST00000573212 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
NPLOC4-211ENST00000573212 PIM2Q9P1W9 311 aa11.19□□□□□ -0.62
NPLOC4-211ENST00000573212 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
NPLOC4-211ENST00000573212 CABP4P57796 275 aa11.18□□□□□ -0.62
NPLOC4-211ENST00000573212 AMOTQ4VCS5 1084 aa11.18□□□□□ -0.62
NPLOC4-211ENST00000573212 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
NPLOC4-211ENST00000573212 KIF13BQ9NQT8 1826 aa11.17□□□□□ -0.62
NPLOC4-211ENST00000573212 DDR1Q08345 913 aa11.17□□□□□ -0.62
NPLOC4-211ENST00000573212 FSTL1Q12841 308 aa11.17□□□□□ -0.62
NPLOC4-211ENST00000573212 NFATC2IPQ8NCF5 419 aa11.17□□□□□ -0.62
NPLOC4-211ENST00000573212 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
NPLOC4-211ENST00000573212 KIF20BQ96Q89 1820 aa11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 ANKRD26Q9UPS8 1709 aa11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 MTHFSP49914 203 aa11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 DALRD3Q5D0E6 543 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 INTS5Q6P9B9 1019 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 SRP68Q9UHB9 627 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 ZNF831Q5JPB2 1677 aa11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 KDM6AO15550 1401 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-211ENST00000573212 USP42Q9H9J4 1324 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-211ENST00000573212 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-211ENST00000573212 TNNT2P45379 298 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-211ENST00000573212 HTRA3P83110 453 aa11.15□□□□□ -0.62
NPLOC4-211ENST00000573212 ZNF530Q6P9A1 599 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-211ENST00000573212 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
NPLOC4-211ENST00000573212 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
NPLOC4-211ENST00000573212 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-211ENST00000573212 CHRNA5P30532 468 aa11.14□□□□□ -0.63
NPLOC4-211ENST00000573212 AEBP1Q8IUX7 1158 aa11.14□□□□□ -0.63
NPLOC4-211ENST00000573212 C4AP0C0L4 1744 aa11.14□□□□□ -0.63
NPLOC4-211ENST00000573212 N4BP2Q86UW6 1770 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-211ENST00000573212 KDM2BQ8NHM5 1336 aa11.13□□□□□ -0.63
NPLOC4-211ENST00000573212 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-211ENST00000573212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
NPLOC4-211ENST00000573212 C16orf71Q8IYS4 520 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-211ENST00000573212 PANK3Q9H999 370 aa11.13□□□□□ -0.63
NPLOC4-211ENST00000573212 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
NPLOC4-211ENST00000573212 PRELPP51888 382 aa11.12□□□□□ -0.63
NPLOC4-211ENST00000573212 KCPQ6ZWJ8 1503 aa11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 MYH14Q7Z406 1995 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 CYP19A1P11511 503 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 IL13P35225 146 aa11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 SULT6B1Q6IMI4 303 aa11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 DNAJC10Q8IXB1 793 aa11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 LGR6Q9HBX8 967 aa11.11□□□□□ -0.63
NPLOC4-211ENST00000573212 SOS1Q07889 1333 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-211ENST00000573212 COL5A3P25940 1745 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-211ENST00000573212 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
NPLOC4-211ENST00000573212 BCL2L12Q9HB09 334 aa11.1□□□□□ -0.63
NPLOC4-211ENST00000573212 WDR70Q9NW82 654 aa11.1□□□□□ -0.63
NPLOC4-211ENST00000573212 NARFQ9UHQ1 456 aa11.1□□□□□ -0.63
NPLOC4-211ENST00000573212 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 BRCA1P38398 1863 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 ZPR1O75312 459 aa11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 NFIXQ14938 502 aa11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 SMC1BQ8NDV3 1235 aa11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 SLC52A2Q9HAB3 445 aa11.09□□□□□ -0.63
NPLOC4-211ENST00000573212 POTECB2RU33 542 aa11.08□□□□□ -0.64
NPLOC4-211ENST00000573212 RNMTO43148 476 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-211ENST00000573212 SERPINB2P05120 415 aa11.08□□□□□ -0.64
NPLOC4-211ENST00000573212 VEGFAP15692 232 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-211ENST00000573212 LMNB1P20700 586 aa11.08□□□□□ -0.64
NPLOC4-211ENST00000573212 MORC1Q86VD1 984 aa11.08□□□□□ -0.64
NPLOC4-211ENST00000573212 POLR3GLQ9BT43 218 aa11.08□□□□□ -0.64
NPLOC4-211ENST00000573212 RASSF7Q02833 373 aa11.07□□□□□ -0.64
NPLOC4-211ENST00000573212 SLC39A6Q13433 755 aa11.07□□□□□ -0.64
NPLOC4-211ENST00000573212 TTLL6Q8N841 843 aa11.07□□□□□ -0.64
NPLOC4-211ENST00000573212 ADAMTS7Q9UKP4 1686 aa11.07□□□□□ -0.64
NPLOC4-211ENST00000573212 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
NPLOC4-211ENST00000573212 WDR90Q96KV7 1748 aa11.06□□□□□ -0.64
NPLOC4-211ENST00000573212 NFKBIEO00221 500 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms