RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 SLC4A10Q6U841 1118 aa20.1■□□□□ 0.81
LITAF-209ENST00000571688 RUFY3Q7L099 469 aa20.1■□□□□ 0.81
LITAF-209ENST00000571688 ALKQ9UM73 1620 aa20.1■□□□□ 0.81
LITAF-209ENST00000571688 F6X3S4 739 aa20.09■□□□□ 0.81
LITAF-209ENST00000571688 SLFN14P0C7P3 912 aa20.09■□□□□ 0.81
LITAF-209ENST00000571688 DNM1Q05193 864 aaKnown RBP20.09■□□□□ 0.81
LITAF-209ENST00000571688 NME9Q86XW9 330 aa20.09■□□□□ 0.81
LITAF-209ENST00000571688 MORC2Q9Y6X9 1032 aaPredicted RBP20.09■□□□□ 0.81
LITAF-209ENST00000571688 G2E3Q7L622 706 aa20.09■□□□□ 0.81
LITAF-209ENST00000571688 TMEM51Q9NW97 253 aa20.09■□□□□ 0.81
LITAF-209ENST00000571688 MTMR6Q9Y217 621 aa20.08■□□□□ 0.81
LITAF-209ENST00000571688 PNMA6EA0A0J9YXQ4 647 aa20.08■□□□□ 0.8
LITAF-209ENST00000571688 C16orf45Q96MC5 204 aaPredicted RBP20.08■□□□□ 0.8
LITAF-209ENST00000571688 ZRANB1Q9UGI0 708 aa20.08■□□□□ 0.8
LITAF-209ENST00000571688 CCDC186Q7Z3E2 898 aa20.07■□□□□ 0.8
LITAF-209ENST00000571688 PAXBP1Q9Y5B6 917 aa20.07■□□□□ 0.8
LITAF-209ENST00000571688 MRVI1Q9Y6F6 885 aa20.07■□□□□ 0.8
LITAF-209ENST00000571688 ATP8B2P98198 1209 aa20.07■□□□□ 0.8
LITAF-209ENST00000571688 RRS1Q15050 365 aaKnown RBP20.07■□□□□ 0.8
LITAF-209ENST00000571688 MCM10Q7L590 875 aa20.07■□□□□ 0.8
LITAF-209ENST00000571688 SLC52A1Q9NWF4 448 aa20.07■□□□□ 0.8
LITAF-209ENST00000571688 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
LITAF-209ENST00000571688 TNNT1P13805 278 aa20.06■□□□□ 0.8
LITAF-209ENST00000571688 LRMPQ12912 555 aa20.06■□□□□ 0.8
LITAF-209ENST00000571688 CRB1P82279 1406 aa20.06■□□□□ 0.8
LITAF-209ENST00000571688 ARHGEF10O15013 1369 aa20.06■□□□□ 0.8
LITAF-209ENST00000571688 SGSM2O43147 1006 aa20.06■□□□□ 0.8
LITAF-209ENST00000571688 KIF18AQ8NI77 898 aa20.06■□□□□ 0.8
LITAF-209ENST00000571688 TYRO3Q06418 890 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 MAP3K11Q16584 847 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 AEBP1Q8IUX7 1158 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 RASEFQ8IZ41 740 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 LARGE1O95461 756 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 GJB2P29033 226 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 NAA30Q147X3 362 aaPredicted RBP20.05■□□□□ 0.8
LITAF-209ENST00000571688 ZSCAN25Q6NSZ9 544 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 LUZP1Q86V48 1076 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 CCDC112Q8NEF3 446 aa20.05■□□□□ 0.8
LITAF-209ENST00000571688 RTF1Q92541 710 aaKnown RBP20.05■□□□□ 0.8
LITAF-209ENST00000571688 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
LITAF-209ENST00000571688 LSG1Q9H089 658 aaKnown RBP20.05■□□□□ 0.8
LITAF-209ENST00000571688 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.04■□□□□ 0.8
LITAF-209ENST00000571688 PLA2G4DQ86XP0 818 aa20.04■□□□□ 0.8
LITAF-209ENST00000571688 XRN1Q8IZH2 1706 aaKnown RBP20.04■□□□□ 0.8
LITAF-209ENST00000571688 GNAI3P08754 354 aa20.04■□□□□ 0.8
LITAF-209ENST00000571688 MON2Q7Z3U7 1717 aa20.03■□□□□ 0.8
LITAF-209ENST00000571688 NUP62CLQ9H1M0 184 aa20.03■□□□□ 0.8
LITAF-209ENST00000571688 NRBP1Q9UHY1 535 aa20.03■□□□□ 0.8
LITAF-209ENST00000571688 TERF2Q15554 542 aa20.03■□□□□ 0.8
LITAF-209ENST00000571688 COG3Q96JB2 828 aa20.03■□□□□ 0.8
LITAF-209ENST00000571688 CBX8Q9HC52 389 aa20.03■□□□□ 0.8
LITAF-209ENST00000571688 CPS1P31327 1500 aa20.02■□□□□ 0.8
LITAF-209ENST00000571688 N4BP2Q86UW6 1770 aaPredicted RBP20.02■□□□□ 0.8
LITAF-209ENST00000571688 ZNF75DP51815 510 aa20.02■□□□□ 0.8
LITAF-209ENST00000571688 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
LITAF-209ENST00000571688 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
LITAF-209ENST00000571688 CCDC83Q8IWF9 413 aa20.02■□□□□ 0.79
LITAF-209ENST00000571688 TTC6Q86TZ1 520 aa20.01■□□□□ 0.79
LITAF-209ENST00000571688 ELP1O95163 1332 aa20.01■□□□□ 0.79
LITAF-209ENST00000571688 LIG1P18858 919 aa20■□□□□ 0.79
LITAF-209ENST00000571688 DRC7Q8IY82 874 aa20■□□□□ 0.79
LITAF-209ENST00000571688 KRT222Q8N1A0 295 aa20■□□□□ 0.79
LITAF-209ENST00000571688 TDRD7Q8NHU6 1098 aaKnown RBP20■□□□□ 0.79
LITAF-209ENST00000571688 FAM53CQ9NYF3 392 aa20■□□□□ 0.79
LITAF-209ENST00000571688 CRYBG1Q9Y4K1 1723 aa20■□□□□ 0.79
LITAF-209ENST00000571688 C3P01024 1663 aa20■□□□□ 0.79
LITAF-209ENST00000571688 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
LITAF-209ENST00000571688 PI4K2BQ8TCG2 481 aa20■□□□□ 0.79
LITAF-209ENST00000571688 ANO6Q4KMQ2 910 aa19.99■□□□□ 0.79
LITAF-209ENST00000571688 ZNF397Q8NF99 534 aaPredicted RBP19.99■□□□□ 0.79
LITAF-209ENST00000571688 CCDC171Q6TFL3 1326 aa19.99■□□□□ 0.79
LITAF-209ENST00000571688 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
LITAF-209ENST00000571688 CASTP20810 708 aaKnown RBP19.99■□□□□ 0.79
LITAF-209ENST00000571688 TPD52L1Q16890 204 aaPredicted RBP19.99■□□□□ 0.79
LITAF-209ENST00000571688 RBM43Q6ZSC3 357 aaKnown RBP19.99■□□□□ 0.79
LITAF-209ENST00000571688 ZSCAN31Q96LW9 406 aaPredicted RBP19.99■□□□□ 0.79
LITAF-209ENST00000571688 TRIM5Q9C035 493 aa19.99■□□□□ 0.79
LITAF-209ENST00000571688 SH2B1Q9NRF2 756 aaPredicted RBP19.99■□□□□ 0.79
LITAF-209ENST00000571688 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
LITAF-209ENST00000571688 FAM208AQ9UK61 1670 aaKnown RBP19.98■□□□□ 0.79
LITAF-209ENST00000571688 CCDC66A2RUB6 948 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 VPS37CA5D8V6 355 aaPredicted RBP19.98■□□□□ 0.79
LITAF-209ENST00000571688 CPA1P15085 419 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 ST3GAL1Q11201 340 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 CAMK4Q16566 473 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 CACTINQ8WUQ7 758 aaKnown RBP19.98■□□□□ 0.79
LITAF-209ENST00000571688 IL1RAPL2Q9NP60 686 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 MAP4K4O95819 1239 aaPredicted RBP19.98■□□□□ 0.79
LITAF-209ENST00000571688 KRT85P78386 507 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 VPS53Q5VIR6 699 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 CEP135Q66GS9 1140 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 NUTM1Q86Y26 1132 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 RGPD1P0DJD0 1748 aa19.98■□□□□ 0.79
LITAF-209ENST00000571688 CHD2O14647 1828 aaKnown RBP19.97■□□□□ 0.79
LITAF-209ENST00000571688 KMT5BQ4FZB7 885 aa19.97■□□□□ 0.79
LITAF-209ENST00000571688 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms