RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 USPL1Q5W0Q7 1092 aa14.54□□□□□ -0.08
CTDNEP1-202ENST00000570380 INTS5Q6P9B9 1019 aaKnown RBP14.54□□□□□ -0.08
CTDNEP1-202ENST00000570380 POLKQ9UBT6 870 aa14.54□□□□□ -0.08
CTDNEP1-202ENST00000570380 ANKRD31Q8N7Z5 1873 aa14.53□□□□□ -0.08
CTDNEP1-202ENST00000570380 SCN11AQ9UI33 1791 aa14.53□□□□□ -0.08
CTDNEP1-202ENST00000570380 CNTNAP1P78357 1384 aa14.53□□□□□ -0.08
CTDNEP1-202ENST00000570380 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
CTDNEP1-202ENST00000570380 DPY19L2Q6NUT2 758 aa14.53□□□□□ -0.08
CTDNEP1-202ENST00000570380 TTLL6Q8N841 843 aa14.53□□□□□ -0.08
CTDNEP1-202ENST00000570380 ZPR1O75312 459 aa14.52□□□□□ -0.09
CTDNEP1-202ENST00000570380 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
CTDNEP1-202ENST00000570380 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
CTDNEP1-202ENST00000570380 NFIXQ14938 502 aa14.52□□□□□ -0.09
CTDNEP1-202ENST00000570380 CACNA1SQ13698 1873 aa14.51□□□□□ -0.09
CTDNEP1-202ENST00000570380 CTCFP49711 727 aaPredicted RBP14.51□□□□□ -0.09
CTDNEP1-202ENST00000570380 NFATC2IPQ8NCF5 419 aa14.51□□□□□ -0.09
CTDNEP1-202ENST00000570380 SOS1Q07889 1333 aaPredicted RBP14.5□□□□□ -0.09
CTDNEP1-202ENST00000570380 MTHFSP49914 203 aa14.5□□□□□ -0.09
CTDNEP1-202ENST00000570380 FAM161AQ3B820 660 aa14.5□□□□□ -0.09
CTDNEP1-202ENST00000570380 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
CTDNEP1-202ENST00000570380 ZNF530Q6P9A1 599 aaPredicted RBP14.5□□□□□ -0.09
CTDNEP1-202ENST00000570380 C2CD5Q86YS7 1000 aa14.5□□□□□ -0.09
CTDNEP1-202ENST00000570380 CARMIL3Q8ND23 1372 aa14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 SERPINB2P05120 415 aa14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 ERFEQ4G0M1 354 aa14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 AIDAQ96BJ3 306 aa14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 BCL2L12Q9HB09 334 aa14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 NARFQ9UHQ1 456 aa14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 SCN4AP35499 1836 aa14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 COL11A2P13942 1736 aaPredicted RBP14.49□□□□□ -0.09
CTDNEP1-202ENST00000570380 PASKQ96RG2 1323 aa14.48□□□□□ -0.09
CTDNEP1-202ENST00000570380 H0YIN7 160 aa14.48□□□□□ -0.09
CTDNEP1-202ENST00000570380 VEGFBP49765 207 aa14.48□□□□□ -0.09
CTDNEP1-202ENST00000570380 LBX1P52954 281 aa14.48□□□□□ -0.09
CTDNEP1-202ENST00000570380 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
CTDNEP1-202ENST00000570380 DNAJC10Q8IXB1 793 aa14.48□□□□□ -0.09
CTDNEP1-202ENST00000570380 ABHD8Q96I13 439 aa14.48□□□□□ -0.09
CTDNEP1-202ENST00000570380 DDNO94850 711 aaPredicted RBP14.47□□□□□ -0.09
CTDNEP1-202ENST00000570380 CDCA8Q53HL2 280 aa14.47□□□□□ -0.09
CTDNEP1-202ENST00000570380 WBP1LQ9NX94 342 aa14.47□□□□□ -0.09
CTDNEP1-202ENST00000570380 SLX4Q8IY92 1834 aa14.46□□□□□ -0.09
CTDNEP1-202ENST00000570380 PCDH10Q9P2E7 1040 aa14.46□□□□□ -0.09
CTDNEP1-202ENST00000570380 COL15A1P39059 1388 aa14.46□□□□□ -0.1
CTDNEP1-202ENST00000570380 C21orf2O43822 256 aa14.45□□□□□ -0.1
CTDNEP1-202ENST00000570380 CYP19A1P11511 503 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-202ENST00000570380 TNNT2P45379 298 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-202ENST00000570380 C1orf141Q5JVX7 400 aa14.45□□□□□ -0.1
CTDNEP1-202ENST00000570380 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-202ENST00000570380 ARFGEF2Q9Y6D5 1785 aa14.45□□□□□ -0.1
CTDNEP1-202ENST00000570380 TMEM88BA6NKF7 163 aa14.44□□□□□ -0.1
CTDNEP1-202ENST00000570380 ITGBL1O95965 494 aaPredicted RBP14.44□□□□□ -0.1
CTDNEP1-202ENST00000570380 HSPA8P11142 646 aaKnown RBP14.44□□□□□ -0.1
CTDNEP1-202ENST00000570380 LDHDQ86WU2 507 aa14.44□□□□□ -0.1
CTDNEP1-202ENST00000570380 AEBP1Q8IUX7 1158 aa14.44□□□□□ -0.1
CTDNEP1-202ENST00000570380 ZNF622Q969S3 477 aaKnown RBP eCLIP14.44□□□□□ -0.1
CTDNEP1-202ENST00000570380 ZBTB1Q9Y2K1 713 aa14.43□□□□□ -0.1
CTDNEP1-202ENST00000570380 LTBP3Q9NS15 1303 aa14.42□□□□□ -0.1
CTDNEP1-202ENST00000570380 ADAMTSL1Q8N6G6 1762 aa14.42□□□□□ -0.1
CTDNEP1-202ENST00000570380 BICDL1Q6ZP65 573 aa14.42□□□□□ -0.1
CTDNEP1-202ENST00000570380 TAOK3Q9H2K8 898 aa14.42□□□□□ -0.1
CTDNEP1-202ENST00000570380 TAF1DQ9H5J8 278 aaPredicted RBP14.42□□□□□ -0.1
CTDNEP1-202ENST00000570380 MLLT1Q03111 559 aaPredicted RBP14.41□□□□□ -0.1
CTDNEP1-202ENST00000570380 UBR2Q8IWV8 1755 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 IQCA1LA6NCM1 817 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 RGS19P49795 217 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 SLC39A6Q13433 755 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 CCDC24Q8N4L8 307 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 L3MBTL3Q96JM7 780 aaPredicted RBP14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 BRIP1Q9BX63 1249 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 SLC52A2Q9HAB3 445 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 PDZRN3Q9UPQ7 1066 aa14.4□□□□□ -0.1
CTDNEP1-202ENST00000570380 SCN7AQ01118 1682 aa14.39□□□□□ -0.11
CTDNEP1-202ENST00000570380 RASSF10A6NK89 507 aa14.39□□□□□ -0.11
CTDNEP1-202ENST00000570380 CCDC85CA6NKD9 419 aa14.39□□□□□ -0.11
CTDNEP1-202ENST00000570380 PDE6BP35913 854 aa14.39□□□□□ -0.11
CTDNEP1-202ENST00000570380 DEFB115Q30KQ5 88 aa14.39□□□□□ -0.11
CTDNEP1-202ENST00000570380 TBC1D9BQ66K14 1250 aa14.39□□□□□ -0.11
CTDNEP1-202ENST00000570380 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
CTDNEP1-202ENST00000570380 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
CTDNEP1-202ENST00000570380 SULT6B1Q6IMI4 303 aa14.38□□□□□ -0.11
CTDNEP1-202ENST00000570380 PRR5LQ6MZQ0 368 aa14.38□□□□□ -0.11
CTDNEP1-202ENST00000570380 WDR33Q9C0J8 1336 aaKnown RBP14.38□□□□□ -0.11
CTDNEP1-202ENST00000570380 MRC1P22897 1456 aa14.38□□□□□ -0.11
CTDNEP1-202ENST00000570380 EIF5P55010 431 aaKnown RBP14.37□□□□□ -0.11
CTDNEP1-202ENST00000570380 EAPPQ56P03 285 aaPredicted RBP14.37□□□□□ -0.11
CTDNEP1-202ENST00000570380 THSD7BQ9C0I4 1608 aa14.37□□□□□ -0.11
CTDNEP1-202ENST00000570380 MAP2K1Q02750 393 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-202ENST00000570380 AKAP4Q5JQC9 854 aa14.36□□□□□ -0.11
CTDNEP1-202ENST00000570380 PRPF40BQ6NWY9 871 aaKnown RBP14.36□□□□□ -0.11
CTDNEP1-202ENST00000570380 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
CTDNEP1-202ENST00000570380 CNKSR1Q969H4 720 aa14.36□□□□□ -0.11
CTDNEP1-202ENST00000570380 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
CTDNEP1-202ENST00000570380 TNRC18O15417 2968 aaPredicted RBP14.35□□□□□ -0.11
CTDNEP1-202ENST00000570380 CNTROBQ8N137 903 aa14.35□□□□□ -0.11
CTDNEP1-202ENST00000570380 TRPM7Q96QT4 1865 aa14.35□□□□□ -0.11
CTDNEP1-202ENST00000570380 ZNF541Q9H0D2 1346 aa14.35□□□□□ -0.11
CTDNEP1-202ENST00000570380 CASP8AP2Q9UKL3 1982 aa14.34□□□□□ -0.11
CTDNEP1-202ENST00000570380 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-202ENST00000570380 SRGNP10124 158 aa14.34□□□□□ -0.11
CTDNEP1-202ENST00000570380 EPHX2P34913 555 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms