RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 ZBTB1Q9Y2K1 713 aa11.89□□□□□ -0.51
NPLOC4-204ENST00000570324 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
NPLOC4-204ENST00000570324 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
NPLOC4-204ENST00000570324 N4BP2Q86UW6 1770 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-204ENST00000570324 COL15A1P39059 1388 aa11.89□□□□□ -0.51
NPLOC4-204ENST00000570324 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 C1QTNF8P60827 252 aa11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 ZNF496Q96IT1 587 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 KIF13BQ9NQT8 1826 aa11.88□□□□□ -0.51
NPLOC4-204ENST00000570324 ATP10DQ9P241 1426 aa11.87□□□□□ -0.51
NPLOC4-204ENST00000570324 DDR1Q08345 913 aa11.87□□□□□ -0.51
NPLOC4-204ENST00000570324 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-204ENST00000570324 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
NPLOC4-204ENST00000570324 POLRMTO00411 1230 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-204ENST00000570324 TM4SF1P30408 202 aa11.86□□□□□ -0.51
NPLOC4-204ENST00000570324 DALRD3Q5D0E6 543 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-204ENST00000570324 BICDL1Q6ZP65 573 aa11.86□□□□□ -0.51
NPLOC4-204ENST00000570324 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-204ENST00000570324 UBR2Q8IWV8 1755 aa11.86□□□□□ -0.51
NPLOC4-204ENST00000570324 NPHP1O15259 732 aa11.85□□□□□ -0.51
NPLOC4-204ENST00000570324 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-204ENST00000570324 SERPINB2P05120 415 aa11.85□□□□□ -0.51
NPLOC4-204ENST00000570324 NFIXQ14938 502 aa11.85□□□□□ -0.51
NPLOC4-204ENST00000570324 MCM10Q7L590 875 aa11.85□□□□□ -0.51
NPLOC4-204ENST00000570324 CEMIPQ8WUJ3 1361 aa11.84□□□□□ -0.51
NPLOC4-204ENST00000570324 CHRNA5P30532 468 aa11.84□□□□□ -0.51
NPLOC4-204ENST00000570324 IL6STP40189 918 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-204ENST00000570324 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-204ENST00000570324 TBC1D2BQ9UPU7 963 aa11.84□□□□□ -0.51
NPLOC4-204ENST00000570324 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-204ENST00000570324 MAPK8IP3Q9UPT6 1336 aa11.84□□□□□ -0.51
NPLOC4-204ENST00000570324 KCNQ3O43525 872 aa11.83□□□□□ -0.52
NPLOC4-204ENST00000570324 A1BGP04217 495 aa11.83□□□□□ -0.52
NPLOC4-204ENST00000570324 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-204ENST00000570324 DCTN1Q14203 1278 aa11.83□□□□□ -0.52
NPLOC4-204ENST00000570324 KIAA1551Q9HCM1 1747 aa11.83□□□□□ -0.52
NPLOC4-204ENST00000570324 KCNA3P22001 575 aa11.82□□□□□ -0.52
NPLOC4-204ENST00000570324 TAF7Q15545 349 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-204ENST00000570324 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
NPLOC4-204ENST00000570324 H0YIN7 160 aa11.81□□□□□ -0.52
NPLOC4-204ENST00000570324 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-204ENST00000570324 RALBP1Q15311 655 aa11.81□□□□□ -0.52
NPLOC4-204ENST00000570324 DZIP3Q86Y13 1208 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-204ENST00000570324 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-204ENST00000570324 ADCY9O60503 1353 aa11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 C9orf131Q5VYM1 1079 aa11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 TBC1D9BQ66K14 1250 aa11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 ZNF652Q9Y2D9 606 aa11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 AFDNP55196 1824 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-204ENST00000570324 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 BRCA1P38398 1863 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 PDE6BP35913 854 aa11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 PIP4K2AP48426 406 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 TTLL6Q8N841 843 aa11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
NPLOC4-204ENST00000570324 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
NPLOC4-204ENST00000570324 ST5P78524 1137 aa11.78□□□□□ -0.52
NPLOC4-204ENST00000570324 CNBD1Q8NA66 436 aa11.78□□□□□ -0.52
NPLOC4-204ENST00000570324 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.525e-11■□□□□ 9.4
NPLOC4-204ENST00000570324 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
NPLOC4-204ENST00000570324 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
NPLOC4-204ENST00000570324 CAMTA2O94983 1202 aa11.77□□□□□ -0.53
NPLOC4-204ENST00000570324 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-204ENST00000570324 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
NPLOC4-204ENST00000570324 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
NPLOC4-204ENST00000570324 DLG5Q8TDM6 1919 aa11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 SCN7AQ01118 1682 aa11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 PRR5LQ6MZQ0 368 aa11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 PLEKHF1Q96S99 279 aa11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 KDM2BQ8NHM5 1336 aa11.76□□□□□ -0.53
NPLOC4-204ENST00000570324 GTF2E1P29083 439 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 RIPK4P57078 832 aa11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 WDR43Q15061 677 aaKnown RBP eCLIP11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 NGEFQ8N5V2 710 aa11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 RRP7AQ9Y3A4 280 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-204ENST00000570324 FAM177BA6PVY3 158 aa11.74□□□□□ -0.53
NPLOC4-204ENST00000570324 KIF3CO14782 793 aa11.74□□□□□ -0.53
NPLOC4-204ENST00000570324 LMNB1P20700 586 aa11.74□□□□□ -0.53
NPLOC4-204ENST00000570324 LMOD3Q0VAK6 560 aa11.74□□□□□ -0.53
NPLOC4-204ENST00000570324 TPTE2Q6XPS3 522 aa11.74□□□□□ -0.53
NPLOC4-204ENST00000570324 TSPYL4Q9UJ04 414 aa11.74□□□□□ -0.53
NPLOC4-204ENST00000570324 NIP7Q9Y221 180 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPLOC4-204ENST00000570324 NBPF26B4DH59 902 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 TOMM70O94826 608 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms