RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 ZNF710Q8N1W2 664 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 GPT2Q8TD30 523 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 BCL2L13Q9BXK5 485 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 PHLPP1O60346 1717 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 SCN11AQ9UI33 1791 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 STK25O00506 426 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 TNNT2P45379 298 aaPredicted RBP6.68□□□□□ -1.34
LINC01541-202ENST00000568095 RRS1Q15050 365 aaKnown RBP6.68□□□□□ -1.34
LINC01541-202ENST00000568095 BRINP3Q76B58 766 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 IGSF1Q8N6C5 1336 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 CPDO75976 1380 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 PLEKHG2Q9H7P9 1386 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 IGSF3O75054 1194 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 HMGN5P82970 282 aaKnown RBP6.68□□□□□ -1.34
LINC01541-202ENST00000568095 TBC1D9Q6ZT07 1266 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 CADPS2Q86UW7 1296 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 FTSJ3Q8IY81 847 aaKnown RBP6.68□□□□□ -1.34
LINC01541-202ENST00000568095 PRIMPOLQ96LW4 560 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 CWC22Q9HCG8 908 aaKnown RBP6.68□□□□□ -1.34
LINC01541-202ENST00000568095 GLI3P10071 1580 aa6.68□□□□□ -1.34
LINC01541-202ENST00000568095 RAD21O60216 631 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 EIF4A2Q14240 407 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 SSH1Q8WYL5 1049 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 RRP7AQ9Y3A4 280 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 PAPPAQ13219 1627 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 RIOK3O14730 519 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 RABEP1Q15276 862 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 ESCO1Q5FWF5 840 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 TMEM57Q8N5G2 664 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 NGDNQ8NEJ9 315 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 GCC1Q96CN9 775 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 RBM42Q9BTD8 480 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 TRIM35Q9UPQ4 493 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 SPATA31A3Q5VYP0 1347 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 COL14A1Q05707 1796 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 DIAPH1O60610 1272 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 CAVIN1Q6NZI2 390 aaKnown RBP6.67□□□□□ -1.34
LINC01541-202ENST00000568095 CFAP53Q96M91 514 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 ZDHHC9Q9Y397 364 aa6.67□□□□□ -1.34
LINC01541-202ENST00000568095 NWD2Q9ULI1 1742 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 ZMYND10O75800 440 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 FCHSD2O94868 740 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 LETM1O95202 739 aaPredicted RBP6.66□□□□□ -1.34
LINC01541-202ENST00000568095 HOXC9P31274 260 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 ALDH1L2Q3SY69 923 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 SPTLC3Q9NUV7 552 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 TUBGCP6Q96RT7 1819 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 TAF7LQ5H9L4 462 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 MCTP1Q6DN14 999 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 TMEM63CQ9P1W3 806 aa6.66□□□□□ -1.34
LINC01541-202ENST00000568095 NOB1Q9ULX3 412 aaKnown RBP6.66□□□□□ -1.34
LINC01541-202ENST00000568095 CDK11BP21127 795 aaKnown RBP6.65□□□□□ -1.34
LINC01541-202ENST00000568095 ARHGEF25Q86VW2 580 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 SMC4Q9NTJ3 1288 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 NPHP3Q7Z494 1330 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 NCLP19338 710 aaKnown RBP6.65□□□□□ -1.34
LINC01541-202ENST00000568095 EXOSC9Q06265 439 aaKnown RBP6.65□□□□□ -1.34
LINC01541-202ENST00000568095 ITPRIPQ8IWB1 547 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 PIBF1Q8WXW3 757 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 LNPKQ9C0E8 428 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 UBR2Q8IWV8 1755 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 TOGARAM1Q9Y4F4 1720 aa6.65□□□□□ -1.34
LINC01541-202ENST00000568095 MRC1P22897 1456 aa6.65□□□□□ -1.35
LINC01541-202ENST00000568095 ZBTB7BO15156 539 aaPredicted RBP6.65□□□□□ -1.35
LINC01541-202ENST00000568095 KIAA2012Q0VF49 1180 aa6.65□□□□□ -1.35
LINC01541-202ENST00000568095 HSP90AB2PQ58FF8 381 aa6.65□□□□□ -1.35
LINC01541-202ENST00000568095 KRT28Q7Z3Y7 464 aa6.65□□□□□ -1.35
LINC01541-202ENST00000568095 ZHX1Q9UKY1 873 aaPredicted RBP6.65□□□□□ -1.35
LINC01541-202ENST00000568095 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.65□□□□□ -1.35
LINC01541-202ENST00000568095 CRB1P82279 1406 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.64□□□□□ -1.35
LINC01541-202ENST00000568095 FOXO3O43524 673 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 CDC45O75419 566 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 ATF3P18847 181 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 TMPOP42166 694 aaKnown RBP6.64□□□□□ -1.35
LINC01541-202ENST00000568095 PKP1Q13835 747 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 IP6K1Q92551 441 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 ARHGAP45Q92619 1136 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 ZNF428Q96B54 188 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 USP26Q9BXU7 913 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 GPBP1L1Q9HC44 474 aaPredicted RBP6.64□□□□□ -1.35
LINC01541-202ENST00000568095 CACNA1FO60840 1977 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 IPO8O15397 1037 aaKnown RBP6.64□□□□□ -1.35
LINC01541-202ENST00000568095 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 PPP4R3BQ5MIZ7 849 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 ABTB2Q8N961 1025 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 ANKRD7Q92527 254 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 PHACTR3Q96KR7 559 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 OVOS2A0A0G2JMS6 1433 aa6.64□□□□□ -1.35
LINC01541-202ENST00000568095 MBD3O95983 291 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 GSPT1P15170 499 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 NLRP6P59044 892 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 FKBP5Q13451 457 aaPredicted RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 ATP2B3Q16720 1220 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 SIRT2Q8IXJ6 389 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 DDX17Q92841 729 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 TSR2Q969E8 191 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 SLAIN2Q9P270 581 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 RBM27Q9P2N5 1060 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms