RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ATXN7O15265 892 aaPredicted RBP5.89□□□□□ -1.47
SMG1-212ENST00000566328 TATP17735 454 aaPredicted RBP5.89□□□□□ -1.47
SMG1-212ENST00000566328 ADH6P28332 368 aa5.89□□□□□ -1.47
SMG1-212ENST00000566328 SMTNP53814 917 aa5.89□□□□□ -1.47
SMG1-212ENST00000566328 GDF10P55107 478 aa5.89□□□□□ -1.47
SMG1-212ENST00000566328 TSGA10IPQ3SY00 556 aa5.89□□□□□ -1.47
SMG1-212ENST00000566328 ARSJQ5FYB0 599 aaPredicted RBP5.89□□□□□ -1.47
SMG1-212ENST00000566328 FAM182BQ5T319 152 aa5.89□□□□□ -1.47
SMG1-212ENST00000566328 NEURL1BA8MQ27 555 aa5.88□□□□□ -1.47
SMG1-212ENST00000566328 FURINP09958 794 aa5.88□□□□□ -1.47
SMG1-212ENST00000566328 DGKGP49619 791 aa5.88□□□□□ -1.47
SMG1-212ENST00000566328 WASHC4Q2M389 1173 aa5.88□□□□□ -1.47
SMG1-212ENST00000566328 DNAAF2Q9NVR5 837 aaKnown RBP5.88□□□□□ -1.47
SMG1-212ENST00000566328 A0A1W2PNR3 127 aa5.87□□□□□ -1.47
SMG1-212ENST00000566328 STAU1O95793 577 aaKnown RBP5.87□□□□□ -1.47
SMG1-212ENST00000566328 HOXB4P17483 251 aaPredicted RBP5.87□□□□□ -1.47
SMG1-212ENST00000566328 ATP4AP20648 1035 aa5.87□□□□□ -1.47
SMG1-212ENST00000566328 SOX11P35716 441 aa5.87□□□□□ -1.47
SMG1-212ENST00000566328 SCNN1DP51172 638 aa5.87□□□□□ -1.47
SMG1-212ENST00000566328 SUV39H2Q9H5I1 410 aa5.87□□□□□ -1.47
SMG1-212ENST00000566328 ZDHHC3Q9NYG2 299 aa5.87□□□□□ -1.47
SMG1-212ENST00000566328 GJA3Q9Y6H8 435 aa5.87□□□□□ -1.47
SMG1-212ENST00000566328 C1QTNF9BB2RNN3 333 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 CDK2AP1O14519 115 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 MAPTP10636 758 aaKnown RBP5.86□□□□□ -1.47
SMG1-212ENST00000566328 TNP2Q05952 138 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 SEMA3FQ13275 785 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 IRF5Q13568 498 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 CHSY3Q70JA7 882 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 PLPP7Q8NBV4 271 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 SLC4A9Q96Q91 983 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 PRR12Q9ULL5 1215 aa5.86□□□□□ -1.47
SMG1-212ENST00000566328 SPDYE3A6NKU9 549 aa5.85□□□□□ -1.47
SMG1-212ENST00000566328 KHNYNO15037 678 aaKnown RBP5.85□□□□□ -1.47
SMG1-212ENST00000566328 CD33P20138 364 aa5.85□□□□□ -1.47
SMG1-212ENST00000566328 VAC14Q08AM6 782 aa5.85□□□□□ -1.47
SMG1-212ENST00000566328 CD163Q86VB7 1156 aa5.85□□□□□ -1.47
SMG1-212ENST00000566328 DCDC2BA2VCK2 349 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 A6NJY4 79 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 BACH1O14867 736 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 FAM157BP0CG42 384 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 ALAS2P22557 587 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 LAMC2Q13753 1193 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 MTFR1Q15390 333 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 ZNF468Q5VIY5 522 aaPredicted RBP5.84□□□□□ -1.47
SMG1-212ENST00000566328 CABP1Q9NZU7 370 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 SERTAD1Q9UHV2 236 aa5.84□□□□□ -1.47
SMG1-212ENST00000566328 ABL2P42684 1182 aa5.83□□□□□ -1.48
SMG1-212ENST00000566328 SAMD5Q5TGI4 173 aa5.83□□□□□ -1.48
SMG1-212ENST00000566328 BICDL1Q6ZP65 573 aa5.83□□□□□ -1.48
SMG1-212ENST00000566328 ZIC5Q96T25 663 aa5.83□□□□□ -1.48
SMG1-212ENST00000566328 GDPD2Q9HCC8 539 aa5.83□□□□□ -1.48
SMG1-212ENST00000566328 MARK1Q9P0L2 795 aa5.83□□□□□ -1.48
SMG1-212ENST00000566328 LZTS3O60299 673 aaPredicted RBP5.82□□□□□ -1.48
SMG1-212ENST00000566328 SPATA31C1P0DKV0 1188 aa5.82□□□□□ -1.48
SMG1-212ENST00000566328 CHRNA4P43681 627 aa5.82□□□□□ -1.48
SMG1-212ENST00000566328 PCBP4P57723 403 aaKnown RBP5.82□□□□□ -1.48
SMG1-212ENST00000566328 FCHSD1Q86WN1 690 aa5.82□□□□□ -1.48
SMG1-212ENST00000566328 NEUROD4Q9HD90 331 aa5.82□□□□□ -1.48
SMG1-212ENST00000566328 IQSEC3Q9UPP2 1182 aaPredicted RBP5.82□□□□□ -1.48
SMG1-212ENST00000566328 ELOA3CA0A087WX78 387 aaPredicted RBP5.81□□□□□ -1.48
SMG1-212ENST00000566328 ELOA3DA6NLF2 546 aaPredicted RBP5.81□□□□□ -1.48
SMG1-212ENST00000566328 TMEM229AB2RXF0 380 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 EML3Q32P44 896 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 ELOA3BQ3SY89 546 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 KRTAP1-3Q8IUG1 177 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 ELOA3Q8NG57 546 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 PLVAPQ9BX97 442 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 KLF15Q9UIH9 416 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 NOD1Q9Y239 953 aa5.81□□□□□ -1.48
SMG1-212ENST00000566328 GPC6Q9Y625 555 aaPredicted RBP5.81□□□□□ -1.48
SMG1-212ENST00000566328 GATA4P43694 442 aa5.8□□□□□ -1.48
SMG1-212ENST00000566328 PRRT3Q5FWE3 981 aa5.8□□□□□ -1.48
SMG1-212ENST00000566328 ZNF295-AS1Q8N0V1 137 aa5.8□□□□□ -1.48
SMG1-212ENST00000566328 PCDHGA11Q9Y5H2 935 aa5.8□□□□□ -1.48
SMG1-212ENST00000566328 EFSO43281 561 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 SLC24A1O60721 1099 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 ITGB7P26010 798 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 PSME1Q06323 249 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 NEUROD1Q13562 356 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 DOC2BQ14184 412 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 WWC1Q8IX03 1113 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 SEMA6BQ9H3T3 888 aa5.79□□□□□ -1.48
SMG1-212ENST00000566328 SCHIP1Q9P0W5 487 aaPredicted RBP5.79□□□□□ -1.48
SMG1-212ENST00000566328 SIN3BO75182 1162 aa5.78□□□□□ -1.48
SMG1-212ENST00000566328 APBA3O96018 575 aa5.78□□□□□ -1.48
SMG1-212ENST00000566328 SYT9Q86SS6 491 aa5.78□□□□□ -1.48
SMG1-212ENST00000566328 NFATC2IPQ8NCF5 419 aa5.78□□□□□ -1.48
SMG1-212ENST00000566328 L3MBTL2Q969R5 705 aa5.78□□□□□ -1.48
SMG1-212ENST00000566328 TRIM11Q96F44 468 aa5.78□□□□□ -1.48
SMG1-212ENST00000566328 SKIP12755 728 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 NOS2P35228 1153 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 TEAD4Q15561 434 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 NACC1Q96RE7 527 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 STRN4Q9NRL3 753 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 HCN2Q9UL51 889 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 ZNF232Q9UNY5 417 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 PARP3Q9Y6F1 533 aa5.77□□□□□ -1.49
SMG1-212ENST00000566328 ADARB2-AS1A8MUL3 147 aa5.76□□□□□ -1.49
SMG1-212ENST00000566328 TXLNAP40222 546 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms