RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 USPL1Q5W0Q7 1092 aa21.59■■□□□ 1.05
EDC3-210ENST00000566219 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
EDC3-210ENST00000566219 ZPR1O75312 459 aa21.58■■□□□ 1.05
EDC3-210ENST00000566219 TM4SF1P30408 202 aa21.58■■□□□ 1.05
EDC3-210ENST00000566219 DNAJC10Q8IXB1 793 aa21.58■■□□□ 1.05
EDC3-210ENST00000566219 SOS1Q07889 1333 aaPredicted RBP21.57■■□□□ 1.04
EDC3-210ENST00000566219 ZC3H4Q9UPT8 1303 aaKnown RBP21.57■■□□□ 1.04
EDC3-210ENST00000566219 COL15A1P39059 1388 aa21.56■■□□□ 1.04
EDC3-210ENST00000566219 LMNB1P20700 586 aa21.55■■□□□ 1.04
EDC3-210ENST00000566219 PRELPP51888 382 aa21.55■■□□□ 1.04
EDC3-210ENST00000566219 SULT6B1Q6IMI4 303 aa21.55■■□□□ 1.04
EDC3-210ENST00000566219 MRC1P22897 1456 aa21.55■■□□□ 1.04
EDC3-210ENST00000566219 HSPA1AP0DMV8 641 aaKnown RBP21.54■■□□□ 1.04
EDC3-210ENST00000566219 HSPA1BP0DMV9 641 aaKnown RBP21.54■■□□□ 1.04
EDC3-210ENST00000566219 NFIXQ14938 502 aa21.54■■□□□ 1.04
EDC3-210ENST00000566219 CARMIL3Q8ND23 1372 aa21.53■■□□□ 1.04
EDC3-210ENST00000566219 GLTPD2A6NH11 291 aa21.53■■□□□ 1.04
EDC3-210ENST00000566219 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
EDC3-210ENST00000566219 PANK3Q9H999 370 aa21.51■■□□□ 1.03
EDC3-210ENST00000566219 SLC52A2Q9HAB3 445 aa21.51■■□□□ 1.03
EDC3-210ENST00000566219 NARFQ9UHQ1 456 aa21.51■■□□□ 1.03
EDC3-210ENST00000566219 ZBTB1Q9Y2K1 713 aa21.51■■□□□ 1.03
EDC3-210ENST00000566219 ANKRD31Q8N7Z5 1873 aa21.5■■□□□ 1.03
EDC3-210ENST00000566219 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
EDC3-210ENST00000566219 CYP19A1P11511 503 aaPredicted RBP21.5■■□□□ 1.03
EDC3-210ENST00000566219 SLC39A6Q13433 755 aa21.5■■□□□ 1.03
EDC3-210ENST00000566219 MORC1Q86VD1 984 aa21.5■■□□□ 1.03
EDC3-210ENST00000566219 UBR2Q8IWV8 1755 aa21.49■■□□□ 1.03
EDC3-210ENST00000566219 NFKBIEO00221 500 aa21.49■■□□□ 1.03
EDC3-210ENST00000566219 SERPINB2P05120 415 aa21.49■■□□□ 1.03
EDC3-210ENST00000566219 AKAP4Q5JQC9 854 aa21.49■■□□□ 1.03
EDC3-210ENST00000566219 C2CD5Q86YS7 1000 aa21.49■■□□□ 1.03
EDC3-210ENST00000566219 TTLL6Q8N841 843 aa21.49■■□□□ 1.03
EDC3-210ENST00000566219 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
EDC3-210ENST00000566219 SCN7AQ01118 1682 aa21.48■■□□□ 1.03
EDC3-210ENST00000566219 LGR6Q9HBX8 967 aa21.48■■□□□ 1.03
EDC3-210ENST00000566219 DICER1Q9UPY3 1922 aaKnown RBP21.47■■□□□ 1.03
EDC3-210ENST00000566219 IL13P35225 146 aa21.47■■□□□ 1.03
EDC3-210ENST00000566219 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
EDC3-210ENST00000566219 FER1L6Q2WGJ9 1857 aa21.45■■□□□ 1.02
EDC3-210ENST00000566219 H0YIN7 160 aa21.45■■□□□ 1.02
EDC3-210ENST00000566219 RNMTO43148 476 aaKnown RBP21.45■■□□□ 1.02
EDC3-210ENST00000566219 BICDL1Q6ZP65 573 aa21.45■■□□□ 1.02
EDC3-210ENST00000566219 EIF4G2P78344 907 aaKnown RBP eCLIP21.44■■□□□ 1.02
EDC3-210ENST00000566219 POTECB2RU33 542 aa21.43■■□□□ 1.02
EDC3-210ENST00000566219 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
EDC3-210ENST00000566219 ZNF219Q9P2Y4 722 aaPredicted RBP21.43■■□□□ 1.02
EDC3-210ENST00000566219 HMOX1P09601 288 aa21.41■■□□□ 1.02
EDC3-210ENST00000566219 ZNF622Q969S3 477 aaKnown RBP eCLIP21.41■■□□□ 1.02
EDC3-210ENST00000566219 HSPA5P11021 654 aaKnown RBP21.4■■□□□ 1.02
EDC3-210ENST00000566219 DPY19L2Q6NUT2 758 aa21.4■■□□□ 1.02
EDC3-210ENST00000566219 C21orf2O43822 256 aa21.39■■□□□ 1.01
EDC3-210ENST00000566219 ERFEQ4G0M1 354 aa21.39■■□□□ 1.01
EDC3-210ENST00000566219 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
EDC3-210ENST00000566219 CCDC24Q8N4L8 307 aa21.39■■□□□ 1.01
EDC3-210ENST00000566219 MKRN1Q9UHC7 482 aaKnown RBP21.39■■□□□ 1.01
EDC3-210ENST00000566219 TBC1D9BQ66K14 1250 aa21.38■■□□□ 1.01
EDC3-210ENST00000566219 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
EDC3-210ENST00000566219 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
EDC3-210ENST00000566219 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
EDC3-210ENST00000566219 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
EDC3-210ENST00000566219 SLX4Q8IY92 1834 aa21.36■■□□□ 1.01
EDC3-210ENST00000566219 POTEIP0CG38 1075 aa21.36■■□□□ 1.01
EDC3-210ENST00000566219 POTEJP0CG39 1038 aa21.36■■□□□ 1.01
EDC3-210ENST00000566219 EIF5P55010 431 aaKnown RBP21.36■■□□□ 1.01
EDC3-210ENST00000566219 CHADLQ6NUI6 762 aa21.36■■□□□ 1.01
EDC3-210ENST00000566219 CREBZFQ9NS37 354 aa21.36■■□□□ 1.01
EDC3-210ENST00000566219 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
EDC3-210ENST00000566219 A0A087WZG4 1122 aa21.35■■□□□ 1.01
EDC3-210ENST00000566219 STARD3NLO95772 234 aa21.35■■□□□ 1.01
EDC3-210ENST00000566219 PDE6BP35913 854 aa21.35■■□□□ 1.01
EDC3-210ENST00000566219 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
EDC3-210ENST00000566219 PRR5LQ6MZQ0 368 aa21.35■■□□□ 1.01
EDC3-210ENST00000566219 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
EDC3-210ENST00000566219 BRIP1Q9BX63 1249 aa21.35■■□□□ 1.01
EDC3-210ENST00000566219 TAOK3Q9H2K8 898 aa21.35■■□□□ 1.01
EDC3-210ENST00000566219 SIPA1L3O60292 1781 aaPredicted RBP21.35■■□□□ 1.01
EDC3-210ENST00000566219 LTBP3Q9NS15 1303 aa21.33■■□□□ 1.01
EDC3-210ENST00000566219 DDNO94850 711 aaPredicted RBP21.33■■□□□ 1.01
EDC3-210ENST00000566219 PDZRN3Q9UPQ7 1066 aa21.33■■□□□ 1.01
EDC3-210ENST00000566219 TBC1D2BQ9UPU7 963 aa21.33■■□□□ 1.01
EDC3-210ENST00000566219 ZNF496Q96IT1 587 aaPredicted RBP21.32■■□□□ 1
EDC3-210ENST00000566219 HEG1Q9ULI3 1381 aa21.32■■□□□ 1
EDC3-210ENST00000566219 NPHP1O15259 732 aa21.31■■□□□ 1
EDC3-210ENST00000566219 FOXN1O15353 648 aa21.31■■□□□ 1
EDC3-210ENST00000566219 CNBD1Q8NA66 436 aa21.31■■□□□ 1
EDC3-210ENST00000566219 CNTNAP1P78357 1384 aa21.31■■□□□ 1
EDC3-210ENST00000566219 SCN4AP35499 1836 aa21.3■■□□□ 1
EDC3-210ENST00000566219 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
EDC3-210ENST00000566219 PRPF40BQ6NWY9 871 aaKnown RBP21.3■■□□□ 1
EDC3-210ENST00000566219 CNKSR1Q969H4 720 aa21.28■■□□□ 1
EDC3-210ENST00000566219 DIAPH1O60610 1272 aaKnown RBP21.27■■□□□ 1
EDC3-210ENST00000566219 IL6STP40189 918 aaPredicted RBP21.27■■□□□ 1
EDC3-210ENST00000566219 ST5P78524 1137 aa21.27■■□□□ 1
EDC3-210ENST00000566219 TEFQ10587 303 aa21.27■■□□□ 1
EDC3-210ENST00000566219 STYK1Q6J9G0 422 aa21.27■■□□□ 1
EDC3-210ENST00000566219 ZNF790Q6PG37 636 aa21.27■■□□□ 1
EDC3-210ENST00000566219 CAMTA2O94983 1202 aa21.26■□□□□ 0.99
EDC3-210ENST00000566219 LDHDQ86WU2 507 aa21.26■□□□□ 0.99
EDC3-210ENST00000566219 SETDB2Q96T68 719 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms