RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 POLA2Q14181 598 aa8.8□□□□□ -1
SMG1-210ENST00000565224 NOL8Q76FK4 1167 aaKnown RBP8.8□□□□□ -1
SMG1-210ENST00000565224 IL1RAPL2Q9NP60 686 aa8.8□□□□□ -1
SMG1-210ENST00000565224 NSFL1CQ9UNZ2 370 aaKnown RBP8.8□□□□□ -1
SMG1-210ENST00000565224 TPM2P07951 284 aa8.8□□□□□ -1
SMG1-210ENST00000565224 HSPA4P34932 840 aa8.8□□□□□ -1
SMG1-210ENST00000565224 PPP1R42Q7Z4L9 355 aa8.8□□□□□ -1
SMG1-210ENST00000565224 NUTM1Q86Y26 1132 aa8.8□□□□□ -1
SMG1-210ENST00000565224 UPF3BQ9BZI7 483 aaKnown RBP8.8□□□□□ -1
SMG1-210ENST00000565224 SURF6O75683 361 aaKnown RBP8.79□□□□□ -1
SMG1-210ENST00000565224 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
SMG1-210ENST00000565224 THEMISQ8N1K5 641 aaPredicted RBP8.79□□□□□ -1
SMG1-210ENST00000565224 RHPN1Q8TCX5 695 aa8.79□□□□□ -1
SMG1-210ENST00000565224 LTV1Q96GA3 475 aaPredicted RBP8.79□□□□□ -1
SMG1-210ENST00000565224 PHAXQ9H814 394 aaKnown RBP8.79□□□□□ -1
SMG1-210ENST00000565224 NOL7Q9UMY1 257 aaKnown RBP8.79□□□□□ -1
SMG1-210ENST00000565224 OFD1O75665 1012 aa8.79□□□□□ -1
SMG1-210ENST00000565224 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
SMG1-210ENST00000565224 PI4K2BQ8TCG2 481 aa8.79□□□□□ -1
SMG1-210ENST00000565224 IL25Q9H293 177 aa8.79□□□□□ -1
SMG1-210ENST00000565224 RAD50Q92878 1312 aa8.79□□□□□ -1
SMG1-210ENST00000565224 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
SMG1-210ENST00000565224 USP54Q70EL1 1684 aa8.79□□□□□ -1
SMG1-210ENST00000565224 RRP9O43818 475 aaKnown RBP8.78□□□□□ -1
SMG1-210ENST00000565224 ABTB2Q8N961 1025 aa8.78□□□□□ -1
SMG1-210ENST00000565224 SYAP1Q96A49 352 aaPredicted RBP8.78□□□□□ -1
SMG1-210ENST00000565224 KIF1BPQ96EK5 621 aa8.78□□□□□ -1
SMG1-210ENST00000565224 CACNA1FO60840 1977 aa8.78□□□□□ -1
SMG1-210ENST00000565224 CEMIPQ8WUJ3 1361 aa8.78□□□□□ -1
SMG1-210ENST00000565224 SGSM2O43147 1006 aa8.78□□□□□ -1
SMG1-210ENST00000565224 SRGAP3O43295 1099 aa8.78□□□□□ -1
SMG1-210ENST00000565224 PLEKHG5O94827 1062 aa8.78□□□□□ -1
SMG1-210ENST00000565224 HOXB7P09629 217 aa8.78□□□□□ -1
SMG1-210ENST00000565224 KIAA1211Q6ZU35 1233 aa8.78□□□□□ -1
SMG1-210ENST00000565224 CNTROBQ8N137 903 aa8.78□□□□□ -1
SMG1-210ENST00000565224 USHBP1Q8N6Y0 703 aa8.78□□□□□ -1
SMG1-210ENST00000565224 CHMP4AQ9BY43 222 aa8.78□□□□□ -1
SMG1-210ENST00000565224 RGPD8O14715 1765 aaPredicted RBP8.78□□□□□ -1
SMG1-210ENST00000565224 MARF1Q9Y4F3 1742 aaKnown RBP8.77□□□□□ -1
SMG1-210ENST00000565224 ZNF500O60304 480 aaPredicted RBP8.77□□□□□ -1.01
SMG1-210ENST00000565224 MAP4K4O95819 1239 aaPredicted RBP8.77□□□□□ -1.01
SMG1-210ENST00000565224 EIF4A1P60842 406 aaKnown RBP8.77□□□□□ -1.01
SMG1-210ENST00000565224 HSP90AA2PQ14568 343 aaPredicted RBP8.77□□□□□ -1.01
SMG1-210ENST00000565224 HSP90AB4PQ58FF6 505 aa8.77□□□□□ -1.01
SMG1-210ENST00000565224 TSPY26PQ9H489 355 aa8.77□□□□□ -1.01
SMG1-210ENST00000565224 PHF14O94880 888 aa8.77□□□□□ -1.01
SMG1-210ENST00000565224 EIF2S2P20042 333 aaKnown RBP8.77□□□□□ -1.01
SMG1-210ENST00000565224 MCM5P33992 734 aa8.77□□□□□ -1.01
SMG1-210ENST00000565224 BEND3Q5T5X7 828 aa8.77□□□□□ -1.01
SMG1-210ENST00000565224 DNAAF4Q8WXU2 420 aa8.77□□□□□ -1.01
SMG1-210ENST00000565224 LSG1Q9H089 658 aaKnown RBP8.77□□□□□ -1.01
SMG1-210ENST00000565224 NBPF7P0C2Y1 421 aaPredicted RBP8.76□□□□□ -1.01
SMG1-210ENST00000565224 KCNA6P17658 529 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 TERF1P54274 439 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 MED1Q15648 1581 aaPredicted RBP8.76□□□□□ -1.01
SMG1-210ENST00000565224 ANKLE2Q86XL3 938 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 IP6K1Q92551 441 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 RPAP1Q9BWH6 1393 aaPredicted RBP8.76□□□□□ -1.01
SMG1-210ENST00000565224 ZNF335Q9H4Z2 1342 aaPredicted RBP8.76□□□□□ -1.01
SMG1-210ENST00000565224 USP42Q9H9J4 1324 aaKnown RBP8.76□□□□□ -1.01
SMG1-210ENST00000565224 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.76□□□□□ -1.01
SMG1-210ENST00000565224 CHPF2Q9P2E5 772 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 ZKSCAN5Q9Y2L8 839 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 SNX14Q9Y5W7 946 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 PI4KAP2A4QPH2 592 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 C14orf37Q86TY3 774 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 USP48Q86UV5 1035 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 TMEM87AQ8NBN3 555 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 RNF214Q8ND24 703 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 TTC14Q96N46 770 aa8.76□□□□□ -1.01
SMG1-210ENST00000565224 TTC41PQ6P2S7 1318 aa8.75□□□□□ -1.01
SMG1-210ENST00000565224 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
SMG1-210ENST00000565224 GLRX3O76003 335 aaKnown RBP8.75□□□□□ -1.01
SMG1-210ENST00000565224 AK2P54819 239 aa8.75□□□□□ -1.01
SMG1-210ENST00000565224 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
SMG1-210ENST00000565224 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
SMG1-210ENST00000565224 LGR6Q9HBX8 967 aa8.75□□□□□ -1.01
SMG1-210ENST00000565224 GDPD2Q9HCC8 539 aa8.75□□□□□ -1.01
SMG1-210ENST00000565224 LIMCH1Q9UPQ0 1083 aa8.75□□□□□ -1.01
SMG1-210ENST00000565224 ZSCAN22P10073 491 aaPredicted RBP8.74□□□□□ -1.01
SMG1-210ENST00000565224 OS9Q13438 667 aaPredicted RBP8.74□□□□□ -1.01
SMG1-210ENST00000565224 MTX1Q13505 466 aa8.74□□□□□ -1.01
SMG1-210ENST00000565224 NBPF6Q5VWK0 638 aa8.74□□□□□ -1.01
SMG1-210ENST00000565224 CWC27Q6UX04 472 aaKnown RBP8.74□□□□□ -1.01
SMG1-210ENST00000565224 RUFY3Q7L099 469 aa8.74□□□□□ -1.01
SMG1-210ENST00000565224 RASEFQ8IZ41 740 aa8.74□□□□□ -1.01
SMG1-210ENST00000565224 NBPF4Q96M43 638 aa8.74□□□□□ -1.01
SMG1-210ENST00000565224 PHF8Q9UPP1 1060 aa8.74□□□□□ -1.01
SMG1-210ENST00000565224 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.74□□□□□ -1.01
SMG1-210ENST00000565224 NPHP4O75161 1426 aaPredicted RBP8.74□□□□□ -1.01
SMG1-210ENST00000565224 ADCY9O60503 1353 aa8.74□□□□□ -1.01
SMG1-210ENST00000565224 KCNQ3O43525 872 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 TEFQ10587 303 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 CSPP1Q1MSJ5 1256 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 GLIPR1L2Q4G1C9 344 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 FAM184AQ8NB25 1140 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 RUFY2Q8WXA3 655 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 DIAPH3Q9NSV4 1193 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms