RNA–Protein interactions for RNA: ENST00000564590.5

SCAPER-212, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 2,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-212ENST00000564590 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
SCAPER-212ENST00000564590 SNRPA1P09661 255 aaKnown RBP17.69■□□□□ 0.42
SCAPER-212ENST00000564590 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
SCAPER-212ENST00000564590 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
SCAPER-212ENST00000564590 SLIT2O94813 1529 aa17.69■□□□□ 0.42
SCAPER-212ENST00000564590 SPATA31A5Q5VU36 1347 aa17.69■□□□□ 0.42
SCAPER-212ENST00000564590 SPATA31A7Q8IWB4 1347 aa17.69■□□□□ 0.42
SCAPER-212ENST00000564590 AAMPQ13685 434 aa17.69■□□□□ 0.42
SCAPER-212ENST00000564590 CWF19L2Q2TBE0 894 aaKnown RBP17.69■□□□□ 0.42
SCAPER-212ENST00000564590 CACNA1FO60840 1977 aa17.69■□□□□ 0.42
SCAPER-212ENST00000564590 HDAC1Q13547 482 aaPredicted RBP17.68■□□□□ 0.42
SCAPER-212ENST00000564590 LNPKQ9C0E8 428 aa17.68■□□□□ 0.42
SCAPER-212ENST00000564590 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
SCAPER-212ENST00000564590 UNC5CLQ8IV45 518 aa17.68■□□□□ 0.42
SCAPER-212ENST00000564590 RBM42Q9BTD8 480 aaKnown RBP17.68■□□□□ 0.42
SCAPER-212ENST00000564590 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
SCAPER-212ENST00000564590 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
SCAPER-212ENST00000564590 A1BGP04217 495 aa17.67■□□□□ 0.42
SCAPER-212ENST00000564590 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
SCAPER-212ENST00000564590 XAGE3Q8WTP9 111 aa17.67■□□□□ 0.42
SCAPER-212ENST00000564590 DNAAF4Q8WXU2 420 aa17.67■□□□□ 0.42
SCAPER-212ENST00000564590 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
SCAPER-212ENST00000564590 COPS6Q7L5N1 327 aa17.67■□□□□ 0.42
SCAPER-212ENST00000564590 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
SCAPER-212ENST00000564590 DDX21Q9NR30 783 aaKnown RBP eCLIP17.67■□□□□ 0.42
SCAPER-212ENST00000564590 ATP10DQ9P241 1426 aa17.67■□□□□ 0.42
SCAPER-212ENST00000564590 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
SCAPER-212ENST00000564590 GLI3P10071 1580 aa17.66■□□□□ 0.42
SCAPER-212ENST00000564590 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
SCAPER-212ENST00000564590 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
SCAPER-212ENST00000564590 USP21Q9UK80 565 aa17.66■□□□□ 0.42
SCAPER-212ENST00000564590 NBPF26B4DH59 902 aa17.65■□□□□ 0.42
SCAPER-212ENST00000564590 NBPF14Q5TI25 921 aa17.65■□□□□ 0.42
SCAPER-212ENST00000564590 NBPF10Q6P3W6 841 aaKnown RBP17.65■□□□□ 0.42
SCAPER-212ENST00000564590 NBPF15Q8N660 670 aa17.65■□□□□ 0.42
SCAPER-212ENST00000564590 SRCIN1Q9C0H9 1055 aa17.65■□□□□ 0.42
SCAPER-212ENST00000564590 ATG3Q9NT62 314 aa17.65■□□□□ 0.42
SCAPER-212ENST00000564590 LRRFIP2Q9Y608 721 aaKnown RBP17.65■□□□□ 0.42
SCAPER-212ENST00000564590 ITGB4P16144 1822 aa17.65■□□□□ 0.42
SCAPER-212ENST00000564590 PDE4AP27815 886 aa17.64■□□□□ 0.41
SCAPER-212ENST00000564590 BEND3Q5T5X7 828 aa17.64■□□□□ 0.41
SCAPER-212ENST00000564590 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
SCAPER-212ENST00000564590 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
SCAPER-212ENST00000564590 PLEKHG2Q9H7P9 1386 aa17.64■□□□□ 0.41
SCAPER-212ENST00000564590 TNS2Q63HR2 1409 aa17.64■□□□□ 0.41
SCAPER-212ENST00000564590 KCPQ6ZWJ8 1503 aa17.64■□□□□ 0.41
SCAPER-212ENST00000564590 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
SCAPER-212ENST00000564590 KCNQ2O43526 872 aa17.63■□□□□ 0.41
SCAPER-212ENST00000564590 RIC3Q7Z5B4 369 aa17.63■□□□□ 0.41
SCAPER-212ENST00000564590 HYPKQ9NX55 129 aa17.63■□□□□ 0.41
SCAPER-212ENST00000564590 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
SCAPER-212ENST00000564590 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
SCAPER-212ENST00000564590 DNAJC10Q8IXB1 793 aa17.63■□□□□ 0.41
SCAPER-212ENST00000564590 ARXQ96QS3 562 aa17.63■□□□□ 0.41
SCAPER-212ENST00000564590 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
SCAPER-212ENST00000564590 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
SCAPER-212ENST00000564590 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
SCAPER-212ENST00000564590 SLC4A9Q96Q91 983 aa17.62■□□□□ 0.41
SCAPER-212ENST00000564590 DOT1LQ8TEK3 1739 aa17.62■□□□□ 0.41
SCAPER-212ENST00000564590 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
SCAPER-212ENST00000564590 CHMP4BQ9H444 224 aaKnown RBP17.61■□□□□ 0.41
SCAPER-212ENST00000564590 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
SCAPER-212ENST00000564590 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
SCAPER-212ENST00000564590 SMARCA5O60264 1052 aaPredicted RBP17.61■□□□□ 0.41
SCAPER-212ENST00000564590 GNAI2P04899 355 aa17.61■□□□□ 0.41
SCAPER-212ENST00000564590 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
SCAPER-212ENST00000564590 TTLL7Q6ZT98 887 aa17.61■□□□□ 0.41
SCAPER-212ENST00000564590 ANKRD44Q8N8A2 993 aa17.61■□□□□ 0.41
SCAPER-212ENST00000564590 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
SCAPER-212ENST00000564590 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SCAPER-212ENST00000564590 UBR2Q8IWV8 1755 aa17.6■□□□□ 0.41
SCAPER-212ENST00000564590 BCL9O00512 1426 aa17.6■□□□□ 0.41
SCAPER-212ENST00000564590 KCNQ4P56696 695 aa17.6■□□□□ 0.41
SCAPER-212ENST00000564590 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
SCAPER-212ENST00000564590 MYD88Q99836 296 aa17.6■□□□□ 0.41
SCAPER-212ENST00000564590 THRAP3Q9Y2W1 955 aaKnown RBP17.6■□□□□ 0.41
SCAPER-212ENST00000564590 AFF2P51816 1311 aa17.59■□□□□ 0.41
SCAPER-212ENST00000564590 ZBTB3Q9H5J0 574 aa17.59■□□□□ 0.41
SCAPER-212ENST00000564590 SPATA31A6Q5VVP1 1343 aa17.59■□□□□ 0.41
SCAPER-212ENST00000564590 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
SCAPER-212ENST00000564590 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
SCAPER-212ENST00000564590 BACH2Q9BYV9 841 aa17.59■□□□□ 0.41
SCAPER-212ENST00000564590 VPS72Q15906 364 aa17.58■□□□□ 0.41
SCAPER-212ENST00000564590 ANKRD13DQ6ZTN6 518 aa17.58■□□□□ 0.41
SCAPER-212ENST00000564590 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.41
SCAPER-212ENST00000564590 PAPPAQ13219 1627 aa17.58■□□□□ 0.4
SCAPER-212ENST00000564590 NUCB1Q02818 461 aa17.58■□□□□ 0.4
SCAPER-212ENST00000564590 C8orf34Q49A92 452 aa17.58■□□□□ 0.4
SCAPER-212ENST00000564590 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
SCAPER-212ENST00000564590 GNAI3P08754 354 aa17.57■□□□□ 0.4
SCAPER-212ENST00000564590 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
SCAPER-212ENST00000564590 OTUD7AQ8TE49 926 aaPredicted RBP17.57■□□□□ 0.4
SCAPER-212ENST00000564590 DDX58O95786 925 aaKnown RBP17.57■□□□□ 0.4
SCAPER-212ENST00000564590 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
SCAPER-212ENST00000564590 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
SCAPER-212ENST00000564590 GOLGB1Q14789 3259 aaKnown RBP17.56■□□□□ 0.4
SCAPER-212ENST00000564590 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
SCAPER-212ENST00000564590 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
SCAPER-212ENST00000564590 DCTPP1Q9H773 170 aa17.55■□□□□ 0.4
SCAPER-212ENST00000564590 LAMB4A4D0S4 1761 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms