RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CSB-PGBD3P0DP91 1061 aa8.31□□□□□ -1.08
CHD9-210ENST00000564582 ITGA6P23229 1130 aa8.31□□□□□ -1.08
CHD9-210ENST00000564582 PSMA6P60900 246 aaKnown RBP8.31□□□□□ -1.08
CHD9-210ENST00000564582 PGBD3Q8N328 593 aa8.31□□□□□ -1.08
CHD9-210ENST00000564582 C1orf216Q8TAB5 229 aa8.31□□□□□ -1.08
CHD9-210ENST00000564582 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
CHD9-210ENST00000564582 F11P03951 625 aa8.3□□□□□ -1.08
CHD9-210ENST00000564582 TATP17735 454 aaPredicted RBP8.3□□□□□ -1.08
CHD9-210ENST00000564582 TEAD4Q15561 434 aa8.3□□□□□ -1.08
CHD9-210ENST00000564582 SWI5Q1ZZU3 235 aa8.3□□□□□ -1.08
CHD9-210ENST00000564582 RIPOR1Q6ZS17 1223 aa8.3□□□□□ -1.08
CHD9-210ENST00000564582 IRF7Q92985 503 aa8.3□□□□□ -1.08
CHD9-210ENST00000564582 AIDAQ96BJ3 306 aa8.3□□□□□ -1.08
CHD9-210ENST00000564582 TSPAN10Q9H1Z9 355 aaPredicted RBP8.3□□□□□ -1.08
CHD9-210ENST00000564582 ZNF232Q9UNY5 417 aa8.3□□□□□ -1.08
CHD9-210ENST00000564582 SERTM1A2A2V5 107 aa8.29□□□□□ -1.08
CHD9-210ENST00000564582 PPP1R12BO60237 982 aaPredicted RBP8.29□□□□□ -1.08
CHD9-210ENST00000564582 VEGFBP49765 207 aa8.29□□□□□ -1.08
CHD9-210ENST00000564582 ZDHHC3Q9NYG2 299 aa8.29□□□□□ -1.08
CHD9-210ENST00000564582 ZMIZ1Q9ULJ6 1067 aa8.29□□□□□ -1.08
CHD9-210ENST00000564582 WFS1O76024 890 aa8.28□□□□□ -1.08
CHD9-210ENST00000564582 NOS2P35228 1153 aa8.28□□□□□ -1.08
CHD9-210ENST00000564582 TBCELQ5QJ74 424 aa8.28□□□□□ -1.08
CHD9-210ENST00000564582 SCG3Q8WXD2 468 aaKnown RBP8.28□□□□□ -1.08
CHD9-210ENST00000564582 L3MBTL2Q969R5 705 aa8.28□□□□□ -1.08
CHD9-210ENST00000564582 USP3Q9Y6I4 520 aa8.28□□□□□ -1.08
CHD9-210ENST00000564582 ATAD2Q6PL18 1390 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 CDC14CA4D256 554 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 IGFBP4P22692 258 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 MSX1P28360 303 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
CHD9-210ENST00000564582 LBRQ14739 615 aaKnown RBP8.27□□□□□ -1.09
CHD9-210ENST00000564582 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 SV2AQ7L0J3 742 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 TRIM22Q8IYM9 498 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
CHD9-210ENST00000564582 EFHC2Q5JST6 749 aa8.26□□□□□ -1.09
CHD9-210ENST00000564582 TMEM164Q5U3C3 297 aa8.26□□□□□ -1.09
CHD9-210ENST00000564582 TREML4Q6UXN2 200 aa8.26□□□□□ -1.09
CHD9-210ENST00000564582 STAG2Q8N3U4 1231 aa8.26□□□□□ -1.09
CHD9-210ENST00000564582 CHMP7Q8WUX9 453 aaPredicted RBP8.26□□□□□ -1.09
CHD9-210ENST00000564582 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
CHD9-210ENST00000564582 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
CHD9-210ENST00000564582 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
CHD9-210ENST00000564582 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
CHD9-210ENST00000564582 BICDL1Q6ZP65 573 aa8.25□□□□□ -1.09
CHD9-210ENST00000564582 VTI1AQ96AJ9 217 aa8.25□□□□□ -1.09
CHD9-210ENST00000564582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHD9-210ENST00000564582 PARP3Q9Y6F1 533 aa8.25□□□□□ -1.09
CHD9-210ENST00000564582 EML1O00423 815 aa8.24□□□□□ -1.09
CHD9-210ENST00000564582 FOXO3O43524 673 aa8.24□□□□□ -1.09
CHD9-210ENST00000564582 VSIG8P0DPA2 414 aa8.24□□□□□ -1.09
CHD9-210ENST00000564582 ZDHHC1Q8WTX9 485 aa8.24□□□□□ -1.09
CHD9-210ENST00000564582 CRISPLD1Q9H336 500 aa8.24□□□□□ -1.09
CHD9-210ENST00000564582 GPC6Q9Y625 555 aaPredicted RBP8.24□□□□□ -1.09
CHD9-210ENST00000564582 MYO15BQ96JP2 1530 aa8.24□□□□□ -1.09
CHD9-210ENST00000564582 C21orf2O43822 256 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 WEE1P30291 646 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 ZNF837Q96EG3 531 aaPredicted RBP8.23□□□□□ -1.09
CHD9-210ENST00000564582 TRERF1Q96PN7 1200 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 C2orf49Q9BVC5 232 aaPredicted RBP8.23□□□□□ -1.09
CHD9-210ENST00000564582 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 NEUROD4Q9HD90 331 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 GJA3Q9Y6H8 435 aa8.23□□□□□ -1.09
CHD9-210ENST00000564582 LGR5O75473 907 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 ATP4AP20648 1035 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 PDE4CQ08493 712 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 DBN1Q16643 649 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 FIGNL1Q6PIW4 674 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 POTEAQ6S8J7 498 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 NLRP8Q86W28 1048 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 RHPN1Q8TCX5 695 aa8.22□□□□□ -1.09
CHD9-210ENST00000564582 CLP1Q92989 425 aaKnown RBP8.22□□□□□ -1.09
CHD9-210ENST00000564582 PRMT3O60678 531 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 TXLNAP40222 546 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 FAM69CQ0P6D2 419 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 HIF1AQ16665 826 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 PHACTR1Q9C0D0 580 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 CUEDC1Q9NWM3 386 aaPredicted RBP8.21□□□□□ -1.1
CHD9-210ENST00000564582 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 USTQ9Y2C2 406 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 HCN4Q9Y3Q4 1203 aa8.21□□□□□ -1.1
CHD9-210ENST00000564582 ZCCHC6Q5VYS8 1495 aaKnown RBP8.2□□□□□ -1.1
CHD9-210ENST00000564582 SH3PXD2AQ5TCZ1 1133 aa8.2□□□□□ -1.1
CHD9-210ENST00000564582 ALDH16A1Q8IZ83 802 aa8.2□□□□□ -1.1
CHD9-210ENST00000564582 PRIMPOLQ96LW4 560 aa8.2□□□□□ -1.1
CHD9-210ENST00000564582 ERBB4Q15303 1308 aa8.2□□□□□ -1.1
CHD9-210ENST00000564582 A0A1W2PNR3 127 aa8.19□□□□□ -1.1
CHD9-210ENST00000564582 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
CHD9-210ENST00000564582 ZIC5Q96T25 663 aa8.19□□□□□ -1.1
CHD9-210ENST00000564582 ANKIB1Q9P2G1 1089 aa8.19□□□□□ -1.1
CHD9-210ENST00000564582 NGLY1Q96IV0 654 aa8.18□□□□□ -1.1
CHD9-210ENST00000564582 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
CHD9-210ENST00000564582 TMEM88BA6NKF7 163 aa8.17□□□□□ -1.1
CHD9-210ENST00000564582 PTCD1O75127 700 aaKnown RBP8.17□□□□□ -1.1
CHD9-210ENST00000564582 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms