RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 FAM200AQ8TCP9 573 aa14.85□□□□□ -0.03
COMMD4-209ENST00000564068 SH2B1Q9NRF2 756 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-209ENST00000564068 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
COMMD4-209ENST00000564068 PIBF1Q8WXW3 757 aa14.85□□□□□ -0.03
COMMD4-209ENST00000564068 CEP85Q6P2H3 762 aa14.85□□□□□ -0.03
COMMD4-209ENST00000564068 NFXL1Q6ZNB6 911 aa14.85□□□□□ -0.03
COMMD4-209ENST00000564068 GPT2Q8TD30 523 aa14.85□□□□□ -0.03
COMMD4-209ENST00000564068 KRT222Q8N1A0 295 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 AK7Q96M32 723 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 BOLA2Q9H3K6 86 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 PSME1Q06323 249 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 CALCOCO1Q9P1Z2 691 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 KDM5BQ9UGL1 1544 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 LUZP1Q86V48 1076 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 CPA1P15085 419 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 FLIIQ13045 1269 aa14.84□□□□□ -0.03
COMMD4-209ENST00000564068 HOOK1Q9UJC3 728 aaKnown RBP14.84□□□□□ -0.03
COMMD4-209ENST00000564068 MAGI2Q86UL8 1455 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 F13A1P00488 732 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 CFAP100Q494V2 611 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 DDX19AQ9NUU7 478 aaKnown RBP14.83□□□□□ -0.04
COMMD4-209ENST00000564068 SKILP12757 684 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 DNAJC25Q9H1X3 360 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 PAXBP1Q9Y5B6 917 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 RTEL1-TNFRSF6BF6WH68 1400 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 CCP110O43303 1012 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 IPO7O95373 1038 aaKnown RBP14.83□□□□□ -0.04
COMMD4-209ENST00000564068 ERC1Q8IUD2 1116 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 TMX1Q9H3N1 280 aa14.83□□□□□ -0.04
COMMD4-209ENST00000564068 BIN1O00499 593 aa14.82□□□□□ -0.04
COMMD4-209ENST00000564068 SYT1P21579 422 aa14.82□□□□□ -0.04
COMMD4-209ENST00000564068 SETQ01105 290 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-209ENST00000564068 GSPT1P15170 499 aaKnown RBP14.82□□□□□ -0.04
COMMD4-209ENST00000564068 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
COMMD4-209ENST00000564068 TAF7Q15545 349 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-209ENST00000564068 NPC1L1Q9UHC9 1359 aa14.82□□□□□ -0.04
COMMD4-209ENST00000564068 CCDC8Q9H0W5 538 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-209ENST00000564068 ANAPC15P60006 121 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 ZBTB9Q96C00 473 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 PCMTD1Q96MG8 357 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-209ENST00000564068 ANO10Q9NW15 660 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 PTPRCP08575 1304 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 TYRO3Q06418 890 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 PPP1R42Q7Z4L9 355 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 ZFP91Q96JP5 570 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-209ENST00000564068 NOL10Q9BSC4 688 aaKnown RBP14.81□□□□□ -0.04
COMMD4-209ENST00000564068 ACBD3Q9H3P7 528 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 BCL2L12Q9HB09 334 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 DUOX2Q9NRD8 1548 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 TIGD1Q96MW7 591 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 KIF2AO00139 706 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-209ENST00000564068 AK2P54819 239 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 FAM173BQ6P4H8 233 aa14.81□□□□□ -0.04
COMMD4-209ENST00000564068 NUDT16Q96DE0 195 aaKnown RBP14.81□□□□□ -0.04
COMMD4-209ENST00000564068 INTS4Q96HW7 963 aaKnown RBP14.81□□□□□ -0.04
COMMD4-209ENST00000564068 NSD2O96028 1365 aa14.8□□□□□ -0.04
COMMD4-209ENST00000564068 MEX3CQ5U5Q3 659 aaKnown RBP14.8□□□□□ -0.04
COMMD4-209ENST00000564068 CCDC70Q6NSX1 233 aa14.8□□□□□ -0.04
COMMD4-209ENST00000564068 SNW1Q13573 536 aaKnown RBP14.8□□□□□ -0.04
COMMD4-209ENST00000564068 ABTB2Q8N961 1025 aa14.8□□□□□ -0.04
COMMD4-209ENST00000564068 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
COMMD4-209ENST00000564068 CHMLP26374 656 aa14.79□□□□□ -0.04
COMMD4-209ENST00000564068 ISM2Q6H9L7 571 aa14.79□□□□□ -0.04
COMMD4-209ENST00000564068 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-209ENST00000564068 KDM5CP41229 1560 aa14.79□□□□□ -0.04
COMMD4-209ENST00000564068 LRRFIP1Q32MZ4 808 aaKnown RBP14.79□□□□□ -0.04
COMMD4-209ENST00000564068 TMC6Q7Z403 805 aa14.79□□□□□ -0.04
COMMD4-209ENST00000564068 ANKRD20A12PQ8NF67 263 aa14.79□□□□□ -0.04
COMMD4-209ENST00000564068 SAFBQ15424 915 aaKnown RBP eCLIP14.79□□□□□ -0.04
COMMD4-209ENST00000564068 KIF20AO95235 890 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 BMS1Q14692 1282 aaKnown RBP14.78□□□□□ -0.04
COMMD4-209ENST00000564068 TTC5Q8N0Z6 440 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 ANKRD36BQ8N2N9 1353 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 FSIP1Q8NA03 581 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 CCDC102AQ96A19 550 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 SHANK2Q9UPX8 1470 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 CCT2P78371 535 aaKnown RBP14.78□□□□□ -0.04
COMMD4-209ENST00000564068 AXDND1Q5T1B0 1012 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-209ENST00000564068 RHPN1Q8TCX5 695 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
COMMD4-209ENST00000564068 ADGRL2O95490 1459 aa14.77□□□□□ -0.04
COMMD4-209ENST00000564068 PDIA4P13667 645 aaKnown RBP14.77□□□□□ -0.04
COMMD4-209ENST00000564068 H0YHG0 523 aa14.77□□□□□ -0.04
COMMD4-209ENST00000564068 ZSWIM4Q9H7M6 989 aa14.77□□□□□ -0.04
COMMD4-209ENST00000564068 OGFRQ9NZT2 677 aa14.77□□□□□ -0.04
COMMD4-209ENST00000564068 NEMFO60524 1076 aa14.77□□□□□ -0.05
COMMD4-209ENST00000564068 BRD1O95696 1058 aa14.77□□□□□ -0.05
COMMD4-209ENST00000564068 FEZ1Q99689 392 aa14.77□□□□□ -0.05
COMMD4-209ENST00000564068 ANXA1P04083 346 aa14.76□□□□□ -0.05
COMMD4-209ENST00000564068 KRT32Q14532 448 aa14.76□□□□□ -0.05
COMMD4-209ENST00000564068 PDE4CQ08493 712 aa14.76□□□□□ -0.05
COMMD4-209ENST00000564068 ECHDC1Q9NTX5 307 aa14.76□□□□□ -0.05
COMMD4-209ENST00000564068 NSFL1CQ9UNZ2 370 aaKnown RBP14.76□□□□□ -0.05
COMMD4-209ENST00000564068 ESCO1Q5FWF5 840 aa14.76□□□□□ -0.05
COMMD4-209ENST00000564068 CCAR1Q8IX12 1150 aaKnown RBP14.76□□□□□ -0.05
COMMD4-209ENST00000564068 RUFY1Q96T51 708 aa14.76□□□□□ -0.05
COMMD4-209ENST00000564068 ZNF518AQ6AHZ1 1483 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 SMTNL1A8MU46 457 aa14.75□□□□□ -0.05
COMMD4-209ENST00000564068 DHX16O60231 1041 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms