RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 PKP1Q13835 747 aa24.42■■□□□ 1.5
MSLN-205ENST00000563941 AMOTQ4VCS5 1084 aa24.42■■□□□ 1.5
MSLN-205ENST00000563941 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
MSLN-205ENST00000563941 NBPF7P0C2Y1 421 aaPredicted RBP24.41■■□□□ 1.5
MSLN-205ENST00000563941 NEK4P51957 841 aa24.41■■□□□ 1.5
MSLN-205ENST00000563941 XPCQ01831 940 aaPredicted RBP24.41■■□□□ 1.5
MSLN-205ENST00000563941 ARHGEF25Q86VW2 580 aa24.41■■□□□ 1.5
MSLN-205ENST00000563941 NUTM1Q86Y26 1132 aa24.41■■□□□ 1.5
MSLN-205ENST00000563941 ANO2Q9NQ90 1003 aa24.41■■□□□ 1.5
MSLN-205ENST00000563941 SRGAP3O43295 1099 aa24.41■■□□□ 1.5
MSLN-205ENST00000563941 NPHP4O75161 1426 aaPredicted RBP24.4■■□□□ 1.5
MSLN-205ENST00000563941 GAS2L3Q86XJ1 694 aa24.4■■□□□ 1.5
MSLN-205ENST00000563941 ADCY9O60503 1353 aa24.4■■□□□ 1.5
MSLN-205ENST00000563941 RNMTO43148 476 aaKnown RBP24.4■■□□□ 1.5
MSLN-205ENST00000563941 PLEKHG5O94827 1062 aa24.4■■□□□ 1.5
MSLN-205ENST00000563941 ANXA1P04083 346 aa24.4■■□□□ 1.5
MSLN-205ENST00000563941 KLHL40Q2TBA0 621 aa24.4■■□□□ 1.5
MSLN-205ENST00000563941 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
MSLN-205ENST00000563941 RHPN1Q8TCX5 695 aa24.4■■□□□ 1.5
MSLN-205ENST00000563941 MCTP1Q6DN14 999 aa24.39■■□□□ 1.49
MSLN-205ENST00000563941 PALD1Q9ULE6 856 aa24.39■■□□□ 1.49
MSLN-205ENST00000563941 DDX49Q9Y6V7 483 aaKnown RBP24.39■■□□□ 1.49
MSLN-205ENST00000563941 ANAPC15P60006 121 aa24.38■■□□□ 1.49
MSLN-205ENST00000563941 OVOS2A0A0G2JMS6 1433 aa24.38■■□□□ 1.49
MSLN-205ENST00000563941 ANKRD24Q8TF21 1146 aa24.38■■□□□ 1.49
MSLN-205ENST00000563941 CAMTA1Q9Y6Y1 1673 aa24.38■■□□□ 1.49
MSLN-205ENST00000563941 MCM2P49736 904 aa24.37■■□□□ 1.49
MSLN-205ENST00000563941 KIF1BPQ96EK5 621 aa24.37■■□□□ 1.49
MSLN-205ENST00000563941 TMX3Q96JJ7 454 aa24.37■■□□□ 1.49
MSLN-205ENST00000563941 DBF4Q9UBU7 674 aaPredicted RBP24.37■■□□□ 1.49
MSLN-205ENST00000563941 TRPM3Q9HCF6 1732 aaPredicted RBP24.36■■□□□ 1.49
MSLN-205ENST00000563941 LMOD2Q6P5Q4 547 aa24.36■■□□□ 1.49
MSLN-205ENST00000563941 RRAGDQ9NQL2 400 aaPredicted RBP24.36■■□□□ 1.49
MSLN-205ENST00000563941 PI4K2BQ8TCG2 481 aa24.35■■□□□ 1.49
MSLN-205ENST00000563941 ZDHHC9Q9Y397 364 aa24.35■■□□□ 1.49
MSLN-205ENST00000563941 IL17RAQ96F46 866 aa24.34■■□□□ 1.49
MSLN-205ENST00000563941 IL25Q9H293 177 aa24.34■■□□□ 1.49
MSLN-205ENST00000563941 MAP4K4O95819 1239 aaPredicted RBP24.33■■□□□ 1.49
MSLN-205ENST00000563941 LMBRD1Q9NUN5 540 aa24.33■■□□□ 1.49
MSLN-205ENST00000563941 SIPA1L3O60292 1781 aaPredicted RBP24.33■■□□□ 1.49
MSLN-205ENST00000563941 EPB41L2O43491 1005 aaKnown RBP24.32■■□□□ 1.48
MSLN-205ENST00000563941 GIGYF1O75420 1035 aaPredicted RBP24.32■■□□□ 1.48
MSLN-205ENST00000563941 HSP90AB4PQ58FF6 505 aa24.32■■□□□ 1.48
MSLN-205ENST00000563941 HEG1Q9ULI3 1381 aa24.32■■□□□ 1.48
MSLN-205ENST00000563941 CUL4AQ13619 759 aa24.31■■□□□ 1.48
MSLN-205ENST00000563941 AXIN2Q9Y2T1 843 aa24.31■■□□□ 1.48
MSLN-205ENST00000563941 MAP3K2Q9Y2U5 619 aa24.31■■□□□ 1.48
MSLN-205ENST00000563941 RGPD5Q99666 1765 aa24.31■■□□□ 1.48
MSLN-205ENST00000563941 PROSER3Q2NL68 480 aa24.31■■□□□ 1.48
MSLN-205ENST00000563941 MTX1Q13505 466 aa24.3■■□□□ 1.48
MSLN-205ENST00000563941 KRT28Q7Z3Y7 464 aa24.3■■□□□ 1.48
MSLN-205ENST00000563941 ALDH1L1O75891 902 aa24.29■■□□□ 1.48
MSLN-205ENST00000563941 KSR2Q6VAB6 950 aa24.29■■□□□ 1.48
MSLN-205ENST00000563941 CRYBG1Q9Y4K1 1723 aa24.29■■□□□ 1.48
MSLN-205ENST00000563941 KIF1AQ12756 1690 aa24.29■■□□□ 1.48
MSLN-205ENST00000563941 HSPA4P34932 840 aa24.29■■□□□ 1.48
MSLN-205ENST00000563941 CNTROBQ8N137 903 aa24.29■■□□□ 1.48
MSLN-205ENST00000563941 ADAMTS7Q9UKP4 1686 aa24.28■■□□□ 1.48
MSLN-205ENST00000563941 PRAMEF22A3QJZ6 481 aa24.28■■□□□ 1.48
MSLN-205ENST00000563941 OS9Q13438 667 aaPredicted RBP24.28■■□□□ 1.48
MSLN-205ENST00000563941 C9orf78Q9NZ63 289 aaPredicted RBP24.28■■□□□ 1.48
MSLN-205ENST00000563941 USP42Q9H9J4 1324 aaKnown RBP24.28■■□□□ 1.48
MSLN-205ENST00000563941 NOL8Q76FK4 1167 aaKnown RBP24.28■■□□□ 1.48
MSLN-205ENST00000563941 UPF3BQ9BZI7 483 aaKnown RBP24.28■■□□□ 1.48
MSLN-205ENST00000563941 LMTK3Q96Q04 1460 aa24.27■■□□□ 1.48
MSLN-205ENST00000563941 SGSM2O43147 1006 aa24.27■■□□□ 1.48
MSLN-205ENST00000563941 NCLP19338 710 aaKnown RBP24.27■■□□□ 1.48
MSLN-205ENST00000563941 PRPF40AO75400 957 aaKnown RBP24.26■■□□□ 1.47
MSLN-205ENST00000563941 CAVIN1Q6NZI2 390 aaKnown RBP24.26■■□□□ 1.47
MSLN-205ENST00000563941 INTS4Q96HW7 963 aaKnown RBP24.26■■□□□ 1.47
MSLN-205ENST00000563941 TTC41PQ6P2S7 1318 aa24.26■■□□□ 1.47
MSLN-205ENST00000563941 RAD50Q92878 1312 aa24.26■■□□□ 1.47
MSLN-205ENST00000563941 HYPKQ9NX55 129 aa24.26■■□□□ 1.47
MSLN-205ENST00000563941 C1orf167Q5SNV9 1468 aa24.26■■□□□ 1.47
MSLN-205ENST00000563941 ZNF445P59923 1031 aa24.25■■□□□ 1.47
MSLN-205ENST00000563941 CWF19L2Q2TBE0 894 aaKnown RBP24.25■■□□□ 1.47
MSLN-205ENST00000563941 PROSER2Q86WR7 435 aaPredicted RBP24.25■■□□□ 1.47
MSLN-205ENST00000563941 ERBB3P21860 1342 aa24.24■■□□□ 1.47
MSLN-205ENST00000563941 HDAC5Q9UQL6 1122 aa24.24■■□□□ 1.47
MSLN-205ENST00000563941 GLRX3O76003 335 aaKnown RBP24.23■■□□□ 1.47
MSLN-205ENST00000563941 BRD1O95696 1058 aa24.23■■□□□ 1.47
MSLN-205ENST00000563941 FOXD4L5Q5VV16 416 aaPredicted RBP24.23■■□□□ 1.47
MSLN-205ENST00000563941 CLASRPQ8N2M8 674 aaKnown RBP24.23■■□□□ 1.47
MSLN-205ENST00000563941 FOXD4L4Q8WXT5 416 aaPredicted RBP24.23■■□□□ 1.47
MSLN-205ENST00000563941 ALS2Q96Q42 1657 aa24.23■■□□□ 1.47
MSLN-205ENST00000563941 ZSCAN23Q3MJ62 389 aa24.23■■□□□ 1.47
MSLN-205ENST00000563941 CHAMP1Q96JM3 812 aa24.23■■□□□ 1.47
MSLN-205ENST00000563941 LSG1Q9H089 658 aaKnown RBP24.23■■□□□ 1.47
MSLN-205ENST00000563941 MST1RQ04912 1400 aa24.22■■□□□ 1.47
MSLN-205ENST00000563941 GPT2Q8TD30 523 aa24.22■■□□□ 1.47
MSLN-205ENST00000563941 ANO8Q9HCE9 1232 aaPredicted RBP24.22■■□□□ 1.47
MSLN-205ENST00000563941 LINS1Q8NG48 757 aa24.22■■□□□ 1.47
MSLN-205ENST00000563941 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
MSLN-205ENST00000563941 ZC3H6P61129 1189 aaKnown RBP24.21■■□□□ 1.47
MSLN-205ENST00000563941 ERC1Q8IUD2 1116 aa24.21■■□□□ 1.47
MSLN-205ENST00000563941 PA2G4Q9UQ80 394 aaKnown RBP24.21■■□□□ 1.47
MSLN-205ENST00000563941 DDX58O95786 925 aaKnown RBP24.2■■□□□ 1.47
MSLN-205ENST00000563941 NASPP49321 788 aaPredicted RBP24.2■■□□□ 1.47
MSLN-205ENST00000563941 CWC27Q6UX04 472 aaKnown RBP24.2■■□□□ 1.47
MSLN-205ENST00000563941 SNX14Q9Y5W7 946 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms