RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 PTCD1O75127 700 aaKnown RBP27.87■■■□□ 2.05
LINC01960-201ENST00000563759 PRIM1P49642 420 aaKnown RBP27.87■■■□□ 2.05
LINC01960-201ENST00000563759 FKBP5Q13451 457 aaPredicted RBP27.87■■■□□ 2.05
LINC01960-201ENST00000563759 QTRT2Q9H974 415 aaKnown RBP27.87■■■□□ 2.05
LINC01960-201ENST00000563759 FBXO41Q8TF61 875 aa27.86■■■□□ 2.05
LINC01960-201ENST00000563759 AAMPQ13685 434 aa27.85■■■□□ 2.05
LINC01960-201ENST00000563759 ASAP1Q9ULH1 1129 aa27.85■■■□□ 2.05
LINC01960-201ENST00000563759 ACSBG1Q96GR2 724 aa27.85■■■□□ 2.05
LINC01960-201ENST00000563759 ANXA1P04083 346 aa27.83■■■□□ 2.05
LINC01960-201ENST00000563759 PHAXQ9H814 394 aaKnown RBP27.83■■■□□ 2.05
LINC01960-201ENST00000563759 ATG3Q9NT62 314 aa27.83■■■□□ 2.05
LINC01960-201ENST00000563759 USP16Q9Y5T5 823 aa27.82■■■□□ 2.04
LINC01960-201ENST00000563759 DDX21Q9NR30 783 aaKnown RBP eCLIP27.81■■■□□ 2.04
LINC01960-201ENST00000563759 HYPKQ9NX55 129 aa27.81■■■□□ 2.04
LINC01960-201ENST00000563759 BRWD3Q6RI45 1802 aa27.8■■■□□ 2.04
LINC01960-201ENST00000563759 F6X3S4 739 aa27.8■■■□□ 2.04
LINC01960-201ENST00000563759 PROSER3Q2NL68 480 aa27.8■■■□□ 2.04
LINC01960-201ENST00000563759 PXDNLA1KZ92 1463 aa27.8■■■□□ 2.04
LINC01960-201ENST00000563759 SLC4A10Q6U841 1118 aa27.79■■■□□ 2.04
LINC01960-201ENST00000563759 RBM42Q9BTD8 480 aaKnown RBP27.79■■■□□ 2.04
LINC01960-201ENST00000563759 CHMP4BQ9H444 224 aaKnown RBP27.79■■■□□ 2.04
LINC01960-201ENST00000563759 SBF2Q86WG5 1849 aa27.79■■■□□ 2.04
LINC01960-201ENST00000563759 NHSQ6T4R5 1651 aa27.79■■■□□ 2.04
LINC01960-201ENST00000563759 ONECUT3O60422 494 aaPredicted RBP27.78■■■□□ 2.04
LINC01960-201ENST00000563759 ZNF772Q68DY9 489 aaPredicted RBP27.78■■■□□ 2.04
LINC01960-201ENST00000563759 INTS3Q68E01 1043 aaKnown RBP27.78■■■□□ 2.04
LINC01960-201ENST00000563759 SEPT12Q8IYM1 358 aa27.78■■■□□ 2.04
LINC01960-201ENST00000563759 TJP1Q07157 1748 aa27.77■■■□□ 2.04
LINC01960-201ENST00000563759 MYL6BP14649 208 aa27.76■■■□□ 2.04
LINC01960-201ENST00000563759 PDIA6Q15084 440 aa27.76■■■□□ 2.04
LINC01960-201ENST00000563759 VSIG10Q8N0Z9 540 aa27.76■■■□□ 2.04
LINC01960-201ENST00000563759 BTAF1O14981 1849 aa27.76■■■□□ 2.03
LINC01960-201ENST00000563759 CCT4P50991 539 aaKnown RBP27.75■■■□□ 2.03
LINC01960-201ENST00000563759 ERBB4Q15303 1308 aa27.75■■■□□ 2.03
LINC01960-201ENST00000563759 TEX13AQ9BXU3 409 aaPredicted RBP27.73■■■□□ 2.03
LINC01960-201ENST00000563759 ZBTB40Q9NUA8 1239 aa27.73■■■□□ 2.03
LINC01960-201ENST00000563759 ZBTB7BO15156 539 aaPredicted RBP27.72■■■□□ 2.03
LINC01960-201ENST00000563759 KCNQ2O43526 872 aa27.72■■■□□ 2.03
LINC01960-201ENST00000563759 PI4KAP2A4QPH2 592 aa27.72■■■□□ 2.03
LINC01960-201ENST00000563759 DDX58O95786 925 aaKnown RBP27.72■■■□□ 2.03
LINC01960-201ENST00000563759 PIP4K2AP48426 406 aaPredicted RBP27.72■■■□□ 2.03
LINC01960-201ENST00000563759 FAM182BQ5T319 152 aa27.72■■■□□ 2.03
LINC01960-201ENST00000563759 PI4KAP1Q8N8J0 262 aa27.72■■■□□ 2.03
LINC01960-201ENST00000563759 ARFGEF2Q9Y6D5 1785 aa27.71■■■□□ 2.03
LINC01960-201ENST00000563759 ADCY9O60503 1353 aa27.71■■■□□ 2.03
LINC01960-201ENST00000563759 AIMP1Q12904 312 aaKnown RBP27.71■■■□□ 2.03
LINC01960-201ENST00000563759 CICQ96RK0 1608 aaPredicted RBP27.71■■■□□ 2.03
LINC01960-201ENST00000563759 DNAJC10Q8IXB1 793 aa27.7■■■□□ 2.03
LINC01960-201ENST00000563759 DNAAF4Q8WXU2 420 aa27.7■■■□□ 2.03
LINC01960-201ENST00000563759 PCDHB15Q9Y5E8 787 aa27.7■■■□□ 2.02
LINC01960-201ENST00000563759 PALLDQ8WX93 1383 aa27.69■■■□□ 2.02
LINC01960-201ENST00000563759 STARD3NLO95772 234 aa27.68■■■□□ 2.02
LINC01960-201ENST00000563759 RBM6P78332 1123 aaKnown RBP27.68■■■□□ 2.02
LINC01960-201ENST00000563759 XAGE3Q8WTP9 111 aa27.68■■■□□ 2.02
LINC01960-201ENST00000563759 KSR2Q6VAB6 950 aa27.68■■■□□ 2.02
LINC01960-201ENST00000563759 CENPQQ7L2Z9 268 aaPredicted RBP27.68■■■□□ 2.02
LINC01960-201ENST00000563759 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
LINC01960-201ENST00000563759 SMARCC1Q92922 1105 aaPredicted RBP27.68■■■□□ 2.02
LINC01960-201ENST00000563759 ZNF831Q5JPB2 1677 aa27.67■■■□□ 2.02
LINC01960-201ENST00000563759 A1BGP04217 495 aa27.67■■■□□ 2.02
LINC01960-201ENST00000563759 LRP10Q7Z4F1 713 aa27.67■■■□□ 2.02
LINC01960-201ENST00000563759 MAP3K2Q9Y2U5 619 aa27.67■■■□□ 2.02
LINC01960-201ENST00000563759 KDM2BQ8NHM5 1336 aa27.67■■■□□ 2.02
LINC01960-201ENST00000563759 AFDNP55196 1824 aaKnown RBP27.66■■■□□ 2.02
LINC01960-201ENST00000563759 NBPF26B4DH59 902 aa27.66■■■□□ 2.02
LINC01960-201ENST00000563759 NBPF14Q5TI25 921 aa27.66■■■□□ 2.02
LINC01960-201ENST00000563759 NBPF10Q6P3W6 841 aaKnown RBP27.66■■■□□ 2.02
LINC01960-201ENST00000563759 COPS6Q7L5N1 327 aa27.66■■■□□ 2.02
LINC01960-201ENST00000563759 NBPF15Q8N660 670 aa27.66■■■□□ 2.02
LINC01960-201ENST00000563759 SLC4A9Q96Q91 983 aa27.66■■■□□ 2.02
LINC01960-201ENST00000563759 NUP188Q5SRE5 1749 aa27.66■■■□□ 2.02
LINC01960-201ENST00000563759 ATP10DQ9P241 1426 aa27.65■■■□□ 2.02
LINC01960-201ENST00000563759 SRCIN1Q9C0H9 1055 aa27.65■■■□□ 2.02
LINC01960-201ENST00000563759 COL5A3P25940 1745 aaPredicted RBP27.65■■■□□ 2.02
LINC01960-201ENST00000563759 C1orf115Q9H7X2 142 aa27.64■■■□□ 2.02
LINC01960-201ENST00000563759 LOC102724428A0A0B4J2F2 783 aa27.64■■■□□ 2.01
LINC01960-201ENST00000563759 SIK1P57059 783 aa27.64■■■□□ 2.01
LINC01960-201ENST00000563759 RIC3Q7Z5B4 369 aa27.64■■■□□ 2.01
LINC01960-201ENST00000563759 MEIS3Q99687 375 aa27.64■■■□□ 2.01
LINC01960-201ENST00000563759 KRT27Q7Z3Y8 459 aa27.63■■■□□ 2.01
LINC01960-201ENST00000563759 ATP6V1AP38606 617 aa27.62■■■□□ 2.01
LINC01960-201ENST00000563759 IGHDP01880 384 aa27.61■■■□□ 2.01
LINC01960-201ENST00000563759 RWDD1Q9H446 243 aaPredicted RBP27.61■■■□□ 2.01
LINC01960-201ENST00000563759 CYP19A1P11511 503 aaPredicted RBP27.61■■■□□ 2.01
LINC01960-201ENST00000563759 BEND3Q5T5X7 828 aa27.61■■■□□ 2.01
LINC01960-201ENST00000563759 ZNF330Q9Y3S2 320 aaPredicted RBP27.61■■■□□ 2.01
LINC01960-201ENST00000563759 EP400Q96L91 3159 aa27.6■■■□□ 2.01
LINC01960-201ENST00000563759 LY75O60449 1722 aa27.6■■■□□ 2.01
LINC01960-201ENST00000563759 ANKRD13DQ6ZTN6 518 aa27.6■■■□□ 2.01
LINC01960-201ENST00000563759 PTF1AQ7RTS3 328 aa27.6■■■□□ 2.01
LINC01960-201ENST00000563759 RREB1Q92766 1687 aa27.59■■■□□ 2.01
LINC01960-201ENST00000563759 MYH14Q7Z406 1995 aaKnown RBP27.58■■■□□ 2.01
LINC01960-201ENST00000563759 GNAI3P08754 354 aa27.58■■■□□ 2.01
LINC01960-201ENST00000563759 RXRBP28702 533 aa27.58■■■□□ 2.01
LINC01960-201ENST00000563759 NEXNQ0ZGT2 675 aa27.58■■■□□ 2.01
LINC01960-201ENST00000563759 HDAC1Q13547 482 aaPredicted RBP27.57■■■□□ 2
LINC01960-201ENST00000563759 FAM196AQ6ZSG2 479 aa27.57■■■□□ 2
LINC01960-201ENST00000563759 PLBD2Q8NHP8 589 aa27.57■■■□□ 2
LINC01960-201ENST00000563759 LINS1Q8NG48 757 aa27.56■■■□□ 2
LINC01960-201ENST00000563759 ALDH1L1O75891 902 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms