RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 DLEC1Q9Y238 1755 aa25.19■■□□□ 1.62
E4F1-203ENST00000563643 PTCD1O75127 700 aaKnown RBP25.19■■□□□ 1.62
E4F1-203ENST00000563643 HSPA8P11142 646 aaKnown RBP25.18■■□□□ 1.62
E4F1-203ENST00000563643 CCDC88AQ3V6T2 1871 aa25.17■■□□□ 1.62
E4F1-203ENST00000563643 ADAMTS7Q9UKP4 1686 aa25.17■■□□□ 1.62
E4F1-203ENST00000563643 WASHC2AQ641Q2 1341 aa25.16■■□□□ 1.62
E4F1-203ENST00000563643 CLSPNQ9HAW4 1339 aa25.16■■□□□ 1.62
E4F1-203ENST00000563643 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
E4F1-203ENST00000563643 RGS19P49795 217 aa25.16■■□□□ 1.62
E4F1-203ENST00000563643 ERFEQ4G0M1 354 aa25.16■■□□□ 1.62
E4F1-203ENST00000563643 USPL1Q5W0Q7 1092 aa25.16■■□□□ 1.62
E4F1-203ENST00000563643 ANKRD26Q9UPS8 1709 aa25.15■■□□□ 1.62
E4F1-203ENST00000563643 ZPR1O75312 459 aa25.15■■□□□ 1.62
E4F1-203ENST00000563643 CCDC85CA6NKD9 419 aa25.14■■□□□ 1.62
E4F1-203ENST00000563643 TMEM88BA6NKF7 163 aa25.14■■□□□ 1.62
E4F1-203ENST00000563643 HSP90AB1P08238 724 aaKnown RBP25.14■■□□□ 1.62
E4F1-203ENST00000563643 CABP4P57796 275 aa25.14■■□□□ 1.62
E4F1-203ENST00000563643 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.62
E4F1-203ENST00000563643 NRXN2Q9P2S2 1712 aa25.13■■□□□ 1.61
E4F1-203ENST00000563643 SLC24A1O60721 1099 aa25.13■■□□□ 1.61
E4F1-203ENST00000563643 NFIXQ14938 502 aa25.13■■□□□ 1.61
E4F1-203ENST00000563643 INTS5Q6P9B9 1019 aaKnown RBP25.13■■□□□ 1.61
E4F1-203ENST00000563643 VIRMAQ69YN4 1812 aaKnown RBP25.13■■□□□ 1.61
E4F1-203ENST00000563643 TJP1Q07157 1748 aa25.12■■□□□ 1.61
E4F1-203ENST00000563643 DDNO94850 711 aaPredicted RBP25.12■■□□□ 1.61
E4F1-203ENST00000563643 LDHDQ86WU2 507 aa25.12■■□□□ 1.61
E4F1-203ENST00000563643 AFDNP55196 1824 aaKnown RBP25.12■■□□□ 1.61
E4F1-203ENST00000563643 H0YIN7 160 aa25.11■■□□□ 1.61
E4F1-203ENST00000563643 CARMIL3Q8ND23 1372 aa25.1■■□□□ 1.61
E4F1-203ENST00000563643 SERPINB2P05120 415 aa25.09■■□□□ 1.61
E4F1-203ENST00000563643 IQCA1LA6NCM1 817 aa25.08■■□□□ 1.61
E4F1-203ENST00000563643 MAP2K1Q02750 393 aaPredicted RBP25.08■■□□□ 1.61
E4F1-203ENST00000563643 ITGBL1O95965 494 aaPredicted RBP25.07■■□□□ 1.6
E4F1-203ENST00000563643 ZNF219Q9P2Y4 722 aaPredicted RBP25.07■■□□□ 1.6
E4F1-203ENST00000563643 DICER1Q9UPY3 1922 aaKnown RBP25.07■■□□□ 1.6
E4F1-203ENST00000563643 SOS1Q07889 1333 aaPredicted RBP25.07■■□□□ 1.6
E4F1-203ENST00000563643 RASSF10A6NK89 507 aa25.06■■□□□ 1.6
E4F1-203ENST00000563643 C21orf2O43822 256 aa25.06■■□□□ 1.6
E4F1-203ENST00000563643 LTBP3Q9NS15 1303 aa25.06■■□□□ 1.6
E4F1-203ENST00000563643 TAF1DQ9H5J8 278 aaPredicted RBP25.05■■□□□ 1.6
E4F1-203ENST00000563643 NARFQ9UHQ1 456 aa25.05■■□□□ 1.6
E4F1-203ENST00000563643 EIF4A2Q14240 407 aaKnown RBP25.04■■□□□ 1.6
E4F1-203ENST00000563643 DEFB115Q30KQ5 88 aa25.04■■□□□ 1.6
E4F1-203ENST00000563643 ZNF530Q6P9A1 599 aaPredicted RBP25.04■■□□□ 1.6
E4F1-203ENST00000563643 NFATC2IPQ8NCF5 419 aa25.04■■□□□ 1.6
E4F1-203ENST00000563643 TAOK3Q9H2K8 898 aa25.04■■□□□ 1.6
E4F1-203ENST00000563643 FER1L6Q2WGJ9 1857 aa25.04■■□□□ 1.6
E4F1-203ENST00000563643 PLEKHO1Q53GL0 409 aaPredicted RBP25.03■■□□□ 1.6
E4F1-203ENST00000563643 ZNF622Q969S3 477 aaKnown RBP eCLIP25.03■■□□□ 1.67e-6■■□□□ 12.8
E4F1-203ENST00000563643 CARD14Q9BXL6 1004 aa25.03■■□□□ 1.6
E4F1-203ENST00000563643 BCL2L12Q9HB09 334 aa25.03■■□□□ 1.6
E4F1-203ENST00000563643 WDR33Q9C0J8 1336 aaKnown RBP25.03■■□□□ 1.6
E4F1-203ENST00000563643 COL15A1P39059 1388 aa25.03■■□□□ 1.6
E4F1-203ENST00000563643 MTHFSP49914 203 aa25.02■■□□□ 1.6
E4F1-203ENST00000563643 CCER1Q8TC90 406 aaPredicted RBP25.02■■□□□ 1.6
E4F1-203ENST00000563643 L3MBTL3Q96JM7 780 aaPredicted RBP25.02■■□□□ 1.6
E4F1-203ENST00000563643 TNRC18O15417 2968 aaPredicted RBP25.01■■□□□ 1.59
E4F1-203ENST00000563643 DNAJC10Q8IXB1 793 aa25.01■■□□□ 1.59
E4F1-203ENST00000563643 POLKQ9UBT6 870 aa25.01■■□□□ 1.59
E4F1-203ENST00000563643 TIMELESSQ9UNS1 1208 aa25.01■■□□□ 1.59
E4F1-203ENST00000563643 EAPPQ56P03 285 aaPredicted RBP25■■□□□ 1.59
E4F1-203ENST00000563643 SCN4AP35499 1836 aa24.98■■□□□ 1.59
E4F1-203ENST00000563643 AMOTQ4VCS5 1084 aa24.98■■□□□ 1.59
E4F1-203ENST00000563643 C1orf141Q5JVX7 400 aa24.97■■□□□ 1.59
E4F1-203ENST00000563643 CFAP44Q96MT7 982 aa24.97■■□□□ 1.59
E4F1-203ENST00000563643 ABT1Q9ULW3 272 aaKnown RBP24.97■■□□□ 1.59
E4F1-203ENST00000563643 COL11A2P13942 1736 aaPredicted RBP24.96■■□□□ 1.59
E4F1-203ENST00000563643 CYP19A1P11511 503 aaPredicted RBP24.96■■□□□ 1.59
E4F1-203ENST00000563643 PDZRN3Q9UPQ7 1066 aa24.96■■□□□ 1.59
E4F1-203ENST00000563643 CLEC11AQ9Y240 323 aa24.96■■□□□ 1.59
E4F1-203ENST00000563643 ZBTB1Q9Y2K1 713 aa24.96■■□□□ 1.59
E4F1-203ENST00000563643 THSD7BQ9C0I4 1608 aa24.95■■□□□ 1.58
E4F1-203ENST00000563643 PDE6BP35913 854 aa24.95■■□□□ 1.58
E4F1-203ENST00000563643 BICDL1Q6ZP65 573 aa24.95■■□□□ 1.58
E4F1-203ENST00000563643 BEGAINQ9BUH8 593 aa24.95■■□□□ 1.58
E4F1-203ENST00000563643 ADAMTSL1Q8N6G6 1762 aa24.95■■□□□ 1.58
E4F1-203ENST00000563643 ANKRD31Q8N7Z5 1873 aa24.94■■□□□ 1.58
E4F1-203ENST00000563643 BRIP1Q9BX63 1249 aa24.94■■□□□ 1.58
E4F1-203ENST00000563643 MAP1SQ66K74 1059 aaPredicted RBP24.93■■□□□ 1.58
E4F1-203ENST00000563643 CNTROBQ8N137 903 aa24.93■■□□□ 1.58
E4F1-203ENST00000563643 HACL1Q9UJ83 578 aa24.93■■□□□ 1.58
E4F1-203ENST00000563643 PDE4DIPQ5VU43 2346 aa24.92■■□□□ 1.58
E4F1-203ENST00000563643 EPHX2P34913 555 aa24.91■■□□□ 1.58
E4F1-203ENST00000563643 SOGA3Q5TF21 947 aa24.9■■□□□ 1.58
E4F1-203ENST00000563643 PRPF40BQ6NWY9 871 aaKnown RBP24.9■■□□□ 1.58
E4F1-203ENST00000563643 PNMA8AQ86V59 439 aaPredicted RBP24.9■■□□□ 1.58
E4F1-203ENST00000563643 CCDC24Q8N4L8 307 aa24.9■■□□□ 1.58
E4F1-203ENST00000563643 ZNF541Q9H0D2 1346 aa24.89■■□□□ 1.58
E4F1-203ENST00000563643 CDCA8Q53HL2 280 aa24.89■■□□□ 1.58
E4F1-203ENST00000563643 PRR5LQ6MZQ0 368 aa24.89■■□□□ 1.58
E4F1-203ENST00000563643 CAPNS2Q96L46 248 aa24.89■■□□□ 1.58
E4F1-203ENST00000563643 TSKSQ9UJT2 592 aa24.89■■□□□ 1.58
E4F1-203ENST00000563643 PAXIP1Q6ZW49 1069 aaPredicted RBP24.88■■□□□ 1.57
E4F1-203ENST00000563643 CNKSR1Q969H4 720 aa24.88■■□□□ 1.57
E4F1-203ENST00000563643 MCOLN1Q9GZU1 580 aa24.88■■□□□ 1.57
E4F1-203ENST00000563643 TNNT2P45379 298 aaPredicted RBP24.87■■□□□ 1.57
E4F1-203ENST00000563643 TBC1D9BQ66K14 1250 aa24.87■■□□□ 1.57
E4F1-203ENST00000563643 RNF123Q5XPI4 1314 aa24.86■■□□□ 1.57
E4F1-203ENST00000563643 ECE1P42892 770 aa24.86■■□□□ 1.57
E4F1-203ENST00000563643 GRM1Q13255 1194 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms