RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 CSB-PGBD3P0DP91 1061 aa24.06■■□□□ 1.44
CDH5-204ENST00000563425 POLA2Q14181 598 aa24.06■■□□□ 1.44
CDH5-204ENST00000563425 CHRNA2Q15822 529 aa24.06■■□□□ 1.44
CDH5-204ENST00000563425 SPRYD3Q8NCJ5 442 aa24.06■■□□□ 1.44
CDH5-204ENST00000563425 MRC1P22897 1456 aa24.05■■□□□ 1.44
CDH5-204ENST00000563425 NBPF7P0C2Y1 421 aaPredicted RBP24.05■■□□□ 1.44
CDH5-204ENST00000563425 PROSER3Q2NL68 480 aa24.05■■□□□ 1.44
CDH5-204ENST00000563425 BRINP3Q76B58 766 aa24.05■■□□□ 1.44
CDH5-204ENST00000563425 PRAMEF22A3QJZ6 481 aa24.04■■□□□ 1.44
CDH5-204ENST00000563425 PPP1R42Q7Z4L9 355 aa24.04■■□□□ 1.44
CDH5-204ENST00000563425 HYPKQ9NX55 129 aa24.04■■□□□ 1.44
CDH5-204ENST00000563425 USP26Q9BXU7 913 aa24.04■■□□□ 1.44
CDH5-204ENST00000563425 AK9Q5TCS8 1911 aa24.03■■□□□ 1.44
CDH5-204ENST00000563425 MX1P20591 662 aa24.03■■□□□ 1.44
CDH5-204ENST00000563425 ZNF790Q6PG37 636 aa24.03■■□□□ 1.44
CDH5-204ENST00000563425 KSR2Q6VAB6 950 aa24.03■■□□□ 1.44
CDH5-204ENST00000563425 IFNL2Q8IZJ0 200 aa24.03■■□□□ 1.44
CDH5-204ENST00000563425 STAP2Q9UGK3 403 aa24.03■■□□□ 1.44
CDH5-204ENST00000563425 PARP4Q9UKK3 1724 aaKnown RBP24.03■■□□□ 1.44
CDH5-204ENST00000563425 RAB11FIP3O75154 756 aa24.02■■□□□ 1.44
CDH5-204ENST00000563425 ALDH1L1O75891 902 aa24.02■■□□□ 1.44
CDH5-204ENST00000563425 CHMP5Q9NZZ3 219 aa24.02■■□□□ 1.44
CDH5-204ENST00000563425 MAP3K2Q9Y2U5 619 aa24.02■■□□□ 1.44
CDH5-204ENST00000563425 DDX21Q9NR30 783 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDH5-204ENST00000563425 ABCA3Q99758 1704 aa24■■□□□ 1.43
CDH5-204ENST00000563425 NFATC2IPQ8NCF5 419 aa24■■□□□ 1.43
CDH5-204ENST00000563425 AOX1Q06278 1338 aa24■■□□□ 1.43
CDH5-204ENST00000563425 SRGAP3O43295 1099 aa23.99■■□□□ 1.43
CDH5-204ENST00000563425 DDIT3P35638 169 aa23.99■■□□□ 1.43
CDH5-204ENST00000563425 SLC39A6Q13433 755 aa23.99■■□□□ 1.43
CDH5-204ENST00000563425 DCAF5Q96JK2 942 aa23.99■■□□□ 1.43
CDH5-204ENST00000563425 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
CDH5-204ENST00000563425 SURF6O75683 361 aaKnown RBP23.98■■□□□ 1.43
CDH5-204ENST00000563425 REC8O95072 547 aa23.98■■□□□ 1.43
CDH5-204ENST00000563425 GSE1Q14687 1217 aa23.98■■□□□ 1.43
CDH5-204ENST00000563425 PDIA6Q15084 440 aa23.98■■□□□ 1.43
CDH5-204ENST00000563425 CYP27B1O15528 508 aa23.98■■□□□ 1.43
CDH5-204ENST00000563425 CD2BP2O95400 341 aaKnown RBP23.98■■□□□ 1.43
CDH5-204ENST00000563425 HSP90AB1P08238 724 aaKnown RBP23.98■■□□□ 1.43
CDH5-204ENST00000563425 TSHZ3Q63HK5 1081 aa23.98■■□□□ 1.43
CDH5-204ENST00000563425 SOS2Q07890 1332 aaPredicted RBP23.97■■□□□ 1.43
CDH5-204ENST00000563425 ERC2O15083 957 aa23.97■■□□□ 1.43
CDH5-204ENST00000563425 MTX1Q13505 466 aa23.97■■□□□ 1.43
CDH5-204ENST00000563425 RABEP1Q15276 862 aa23.97■■□□□ 1.43
CDH5-204ENST00000563425 DDX58O95786 925 aaKnown RBP23.96■■□□□ 1.43
CDH5-204ENST00000563425 K7ELQ4 463 aaPredicted RBP23.96■■□□□ 1.43
CDH5-204ENST00000563425 SLAIN2Q9P270 581 aa23.96■■□□□ 1.43
CDH5-204ENST00000563425 LAMB4A4D0S4 1761 aa23.95■■□□□ 1.43
CDH5-204ENST00000563425 LINS1Q8NG48 757 aa23.95■■□□□ 1.42
CDH5-204ENST00000563425 RHPN1Q8TCX5 695 aa23.95■■□□□ 1.42
CDH5-204ENST00000563425 C9orf78Q9NZ63 289 aaPredicted RBP23.95■■□□□ 1.42
CDH5-204ENST00000563425 HDAC5Q9UQL6 1122 aa23.95■■□□□ 1.42
CDH5-204ENST00000563425 KIF1BPQ96EK5 621 aa23.94■■□□□ 1.42
CDH5-204ENST00000563425 IL1RAPL2Q9NP60 686 aa23.94■■□□□ 1.42
CDH5-204ENST00000563425 KDM4FA0A1W2PPD8 638 aa23.94■■□□□ 1.42
CDH5-204ENST00000563425 HSP90AB4PQ58FF6 505 aa23.94■■□□□ 1.42
CDH5-204ENST00000563425 ZNF335Q9H4Z2 1342 aaPredicted RBP23.93■■□□□ 1.42
CDH5-204ENST00000563425 CWF19L2Q2TBE0 894 aaKnown RBP23.93■■□□□ 1.42
CDH5-204ENST00000563425 ZNF496Q96IT1 587 aaPredicted RBP23.93■■□□□ 1.42
CDH5-204ENST00000563425 UTYO14607 1347 aa23.93■■□□□ 1.42
CDH5-204ENST00000563425 WDR17Q8IZU2 1322 aa23.93■■□□□ 1.42
CDH5-204ENST00000563425 CIZ1Q9ULV3 898 aaPredicted RBP23.92■■□□□ 1.42
CDH5-204ENST00000563425 GLI3P10071 1580 aa23.92■■□□□ 1.42
CDH5-204ENST00000563425 PRDM11Q9NQV5 511 aa23.92■■□□□ 1.42
CDH5-204ENST00000563425 NHSL1Q5SYE7 1610 aa23.91■■□□□ 1.42
CDH5-204ENST00000563425 AFDNP55196 1824 aaKnown RBP23.9■■□□□ 1.42
CDH5-204ENST00000563425 AIMP1Q12904 312 aaKnown RBP23.9■■□□□ 1.42
CDH5-204ENST00000563425 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
CDH5-204ENST00000563425 ESYT1Q9BSJ8 1104 aa23.9■■□□□ 1.42
CDH5-204ENST00000563425 COL5A2P05997 1499 aaPredicted RBP23.9■■□□□ 1.42
CDH5-204ENST00000563425 TRIM6-TRIM34B2RNG4 842 aa23.9■■□□□ 1.42
CDH5-204ENST00000563425 GRM8O00222 908 aa23.9■■□□□ 1.42
CDH5-204ENST00000563425 SNRPA1P09661 255 aaKnown RBP23.9■■□□□ 1.42
CDH5-204ENST00000563425 CHMLP26374 656 aa23.9■■□□□ 1.42
CDH5-204ENST00000563425 NUTM1Q86Y26 1132 aa23.9■■□□□ 1.42
CDH5-204ENST00000563425 LARP1Q6PKG0 1096 aaKnown RBP23.89■■□□□ 1.42
CDH5-204ENST00000563425 RILPL2Q969X0 211 aa23.89■■□□□ 1.42
CDH5-204ENST00000563425 FMNL2Q96PY5 1086 aa23.89■■□□□ 1.42
CDH5-204ENST00000563425 SHANK3Q9BYB0 1731 aa23.89■■□□□ 1.41
CDH5-204ENST00000563425 UBR2Q8IWV8 1755 aa23.89■■□□□ 1.41
CDH5-204ENST00000563425 ARFGEF2Q9Y6D5 1785 aa23.89■■□□□ 1.41
CDH5-204ENST00000563425 MCM4P33991 863 aa23.88■■□□□ 1.41
CDH5-204ENST00000563425 CABP4P57796 275 aa23.88■■□□□ 1.41
CDH5-204ENST00000563425 RIC3Q7Z5B4 369 aa23.88■■□□□ 1.41
CDH5-204ENST00000563425 MYL6BP14649 208 aa23.87■■□□□ 1.41
CDH5-204ENST00000563425 UNC5CLQ8IV45 518 aa23.87■■□□□ 1.41
CDH5-204ENST00000563425 PI4K2BQ8TCG2 481 aa23.87■■□□□ 1.41
CDH5-204ENST00000563425 XAGE3Q8WTP9 111 aa23.87■■□□□ 1.41
CDH5-204ENST00000563425 IGKV5-2P06315 115 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 HSP90AA1P07900 732 aaKnown RBP23.86■■□□□ 1.41
CDH5-204ENST00000563425 TOM1L2Q6ZVM7 507 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 LRP10Q7Z4F1 713 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 USP16Q9Y5T5 823 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 USP42Q9H9J4 1324 aaKnown RBP23.86■■□□□ 1.41
CDH5-204ENST00000563425 COPS6Q7L5N1 327 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 SUCLG2Q96I99 432 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 PCDH11XQ9BZA7 1347 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 PCDH11YQ9BZA8 1340 aa23.86■■□□□ 1.41
CDH5-204ENST00000563425 ZCRB1Q8TBF4 217 aaKnown RBP23.85■■□□□ 1.41
CDH5-204ENST00000563425 KAZALD1Q96I82 304 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms