RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 VSIG8P0DPA2 414 aa9.44□□□□□ -0.9
LINC00254-201ENST00000563416 PSMA6P60900 246 aaKnown RBP9.44□□□□□ -0.9
LINC00254-201ENST00000563416 SV2AQ7L0J3 742 aa9.44□□□□□ -0.9
LINC00254-201ENST00000563416 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
LINC00254-201ENST00000563416 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
LINC00254-201ENST00000563416 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
LINC00254-201ENST00000563416 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
LINC00254-201ENST00000563416 ARXQ96QS3 562 aa9.44□□□□□ -0.9
LINC00254-201ENST00000563416 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
LINC00254-201ENST00000563416 TEAD4Q15561 434 aa9.43□□□□□ -0.9
LINC00254-201ENST00000563416 TRIM22Q8IYM9 498 aa9.43□□□□□ -0.9
LINC00254-201ENST00000563416 TSPAN10Q9H1Z9 355 aaPredicted RBP9.43□□□□□ -0.9
LINC00254-201ENST00000563416 ZNF232Q9UNY5 417 aa9.43□□□□□ -0.9
LINC00254-201ENST00000563416 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
LINC00254-201ENST00000563416 NOS2P35228 1153 aa9.42□□□□□ -0.9
LINC00254-201ENST00000563416 FOXR1Q6PIV2 292 aa9.42□□□□□ -0.9
LINC00254-201ENST00000563416 GPAMQ9HCL2 828 aa9.42□□□□□ -0.9
LINC00254-201ENST00000563416 ZDHHC3Q9NYG2 299 aa9.42□□□□□ -0.9
LINC00254-201ENST00000563416 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
LINC00254-201ENST00000563416 SERTM1A2A2V5 107 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
LINC00254-201ENST00000563416 MSX1P28360 303 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 LBRQ14739 615 aaKnown RBP9.41□□□□□ -0.9
LINC00254-201ENST00000563416 SWI5Q1ZZU3 235 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 EFHC2Q5JST6 749 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 TBCELQ5QJ74 424 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 VWA5B2Q8N398 1253 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
LINC00254-201ENST00000563416 ATAD2Q6PL18 1390 aa9.4□□□□□ -0.9
LINC00254-201ENST00000563416 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.9
LINC00254-201ENST00000563416 ARID3AQ99856 593 aa9.4□□□□□ -0.9
LINC00254-201ENST00000563416 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
LINC00254-201ENST00000563416 ERBB4Q15303 1308 aa9.39□□□□□ -0.91
LINC00254-201ENST00000563416 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
LINC00254-201ENST00000563416 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
LINC00254-201ENST00000563416 CRISPLD1Q9H336 500 aa9.39□□□□□ -0.91
LINC00254-201ENST00000563416 CUEDC1Q9NWM3 386 aaPredicted RBP9.39□□□□□ -0.91
LINC00254-201ENST00000563416 ZMIZ1Q9ULJ6 1067 aa9.39□□□□□ -0.91
LINC00254-201ENST00000563416 PARP3Q9Y6F1 533 aa9.39□□□□□ -0.91
LINC00254-201ENST00000563416 IGFBP4P22692 258 aa9.38□□□□□ -0.91
LINC00254-201ENST00000563416 DBN1Q16643 649 aa9.38□□□□□ -0.91
LINC00254-201ENST00000563416 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
LINC00254-201ENST00000563416 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
LINC00254-201ENST00000563416 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
LINC00254-201ENST00000563416 CHMP7Q8WUX9 453 aaPredicted RBP9.38□□□□□ -0.91
LINC00254-201ENST00000563416 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
LINC00254-201ENST00000563416 RUBCNLQ9H714 662 aa9.38□□□□□ -0.91
LINC00254-201ENST00000563416 EML1O00423 815 aa9.37□□□□□ -0.91
LINC00254-201ENST00000563416 ATP4AP20648 1035 aa9.37□□□□□ -0.91
LINC00254-201ENST00000563416 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
LINC00254-201ENST00000563416 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
LINC00254-201ENST00000563416 STK32AQ8WU08 396 aa9.37□□□□□ -0.91
LINC00254-201ENST00000563416 C21orf2O43822 256 aa9.36□□□□□ -0.91
LINC00254-201ENST00000563416 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
LINC00254-201ENST00000563416 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
LINC00254-201ENST00000563416 FOXO3O43524 673 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 GMPRP36959 345 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 TXLNAP40222 546 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 TMEM164Q5U3C3 297 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 POTEAQ6S8J7 498 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 NLRP8Q86W28 1048 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 VTI1AQ96AJ9 217 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 C2orf49Q9BVC5 232 aaPredicted RBP9.35□□□□□ -0.91
LINC00254-201ENST00000563416 PHF24Q9UPV7 400 aa9.35□□□□□ -0.91
LINC00254-201ENST00000563416 WIPF1O43516 503 aa9.34□□□□□ -0.91
LINC00254-201ENST00000563416 LGR5O75473 907 aa9.34□□□□□ -0.91
LINC00254-201ENST00000563416 WEE1P30291 646 aa9.34□□□□□ -0.91
LINC00254-201ENST00000563416 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
LINC00254-201ENST00000563416 NEUROD4Q9HD90 331 aa9.34□□□□□ -0.91
LINC00254-201ENST00000563416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00254-201ENST00000563416 CCDC180Q9P1Z9 1646 aa9.34□□□□□ -0.91
LINC00254-201ENST00000563416 A0A1W2PNR3 127 aa9.33□□□□□ -0.92
LINC00254-201ENST00000563416 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
LINC00254-201ENST00000563416 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
LINC00254-201ENST00000563416 GPR161Q8N6U8 529 aaKnown RBP9.33□□□□□ -0.92
LINC00254-201ENST00000563416 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
LINC00254-201ENST00000563416 HCN4Q9Y3Q4 1203 aa9.33□□□□□ -0.92
LINC00254-201ENST00000563416 HIF1AQ16665 826 aa9.32□□□□□ -0.92
LINC00254-201ENST00000563416 ZIC5Q96T25 663 aa9.32□□□□□ -0.92
LINC00254-201ENST00000563416 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
LINC00254-201ENST00000563416 PHACTR1Q9C0D0 580 aa9.32□□□□□ -0.92
LINC00254-201ENST00000563416 GPR25O00155 361 aa9.31□□□□□ -0.92
LINC00254-201ENST00000563416 PRMT3O60678 531 aa9.31□□□□□ -0.92
LINC00254-201ENST00000563416 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
LINC00254-201ENST00000563416 ALDH16A1Q8IZ83 802 aa9.31□□□□□ -0.92
LINC00254-201ENST00000563416 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
LINC00254-201ENST00000563416 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
LINC00254-201ENST00000563416 INSM1Q01101 510 aaPredicted RBP9.3□□□□□ -0.92
LINC00254-201ENST00000563416 NGLY1Q96IV0 654 aa9.3□□□□□ -0.92
LINC00254-201ENST00000563416 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
LINC00254-201ENST00000563416 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
LINC00254-201ENST00000563416 PCDHGC4Q9Y5F7 938 aa9.3□□□□□ -0.92
LINC00254-201ENST00000563416 THBS1P07996 1170 aa9.29□□□□□ -0.92
LINC00254-201ENST00000563416 CNTNAP3BQ96NU0 1288 aa9.29□□□□□ -0.92
LINC00254-201ENST00000563416 CNTNAP3Q9BZ76 1288 aa9.29□□□□□ -0.92
LINC00254-201ENST00000563416 ZCCHC2Q9C0B9 1178 aaKnown RBP9.29□□□□□ -0.92
LINC00254-201ENST00000563416 ATXN7L1Q9ULK2 861 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms