RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ATP1A2P50993 1020 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L24Q0WX57 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 DPYDQ12882 1025 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 MTFR1Q15390 333 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 SCHIP1Q9P0W5 487 aaPredicted RBP6.83□□□□□ -1.32
HERC1-215ENST00000561436 WIPF1O43516 503 aa6.82□□□□□ -1.32
HERC1-215ENST00000561436 F11P03951 625 aa6.82□□□□□ -1.32
HERC1-215ENST00000561436 ATP4AP20648 1035 aa6.82□□□□□ -1.32
HERC1-215ENST00000561436 PTK7Q13308 1070 aa6.82□□□□□ -1.32
HERC1-215ENST00000561436 GAS6Q14393 721 aa6.82□□□□□ -1.32
HERC1-215ENST00000561436 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
HERC1-215ENST00000561436 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
HERC1-215ENST00000561436 NANOS1Q8WY41 292 aaKnown RBP6.82□□□□□ -1.32
HERC1-215ENST00000561436 VRTNQ9H8Y1 702 aa6.82□□□□□ -1.32
HERC1-215ENST00000561436 BACH1O14867 736 aa6.81□□□□□ -1.32
HERC1-215ENST00000561436 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
HERC1-215ENST00000561436 FOXK2Q01167 660 aa6.81□□□□□ -1.32
HERC1-215ENST00000561436 TRIM22Q8IYM9 498 aa6.81□□□□□ -1.32
HERC1-215ENST00000561436 SIX5Q8N196 739 aa6.81□□□□□ -1.32
HERC1-215ENST00000561436 NIFKQ9BYG3 293 aaKnown RBP6.81□□□□□ -1.32
HERC1-215ENST00000561436 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
HERC1-215ENST00000561436 A0A1B0GTH6 734 aa6.8□□□□□ -1.32
HERC1-215ENST00000561436 CDK2AP1O14519 115 aa6.8□□□□□ -1.32
HERC1-215ENST00000561436 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
HERC1-215ENST00000561436 CHMP7Q8WUX9 453 aaPredicted RBP6.8□□□□□ -1.32
HERC1-215ENST00000561436 ZNF232Q9UNY5 417 aa6.8□□□□□ -1.32
HERC1-215ENST00000561436 C21orf2O43822 256 aa6.79□□□□□ -1.32
HERC1-215ENST00000561436 WDR44Q5JSH3 913 aa6.79□□□□□ -1.32
HERC1-215ENST00000561436 WHAMMQ8TF30 809 aa6.79□□□□□ -1.32
HERC1-215ENST00000561436 L3MBTL2Q969R5 705 aa6.79□□□□□ -1.32
HERC1-215ENST00000561436 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
HERC1-215ENST00000561436 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
HERC1-215ENST00000561436 PPP1R15AO75807 674 aaPredicted RBP6.78□□□□□ -1.32
HERC1-215ENST00000561436 SEC13P55735 322 aa6.78□□□□□ -1.32
HERC1-215ENST00000561436 ARSJQ5FYB0 599 aaPredicted RBP6.78□□□□□ -1.32
HERC1-215ENST00000561436 STK32AQ8WU08 396 aa6.78□□□□□ -1.32
HERC1-215ENST00000561436 SCG3Q8WXD2 468 aaKnown RBP6.78□□□□□ -1.32
HERC1-215ENST00000561436 ZMIZ1Q9ULJ6 1067 aa6.78□□□□□ -1.32
HERC1-215ENST00000561436 RBM19Q9Y4C8 960 aaKnown RBP6.78□□□□□ -1.32
HERC1-215ENST00000561436 FAM196BA6NMK8 535 aa6.77□□□□□ -1.33
HERC1-215ENST00000561436 NOS2P35228 1153 aa6.77□□□□□ -1.33
HERC1-215ENST00000561436 PDE4CQ08493 712 aa6.77□□□□□ -1.33
HERC1-215ENST00000561436 UBAP2LQ14157 1087 aaKnown RBP6.77□□□□□ -1.33
HERC1-215ENST00000561436 ABHD17AQ96GS6 310 aa6.77□□□□□ -1.33
HERC1-215ENST00000561436 NGLY1Q96IV0 654 aa6.77□□□□□ -1.33
HERC1-215ENST00000561436 HCN2Q9UL51 889 aa6.77□□□□□ -1.33
HERC1-215ENST00000561436 NOVA2Q9UNW9 492 aaKnown RBP6.77□□□□□ -1.33
HERC1-215ENST00000561436 ACIN1Q9UKV3 1341 aaKnown RBP6.76□□□□□ -1.33
HERC1-215ENST00000561436 A0A1W2PNR3 127 aa6.76□□□□□ -1.33
HERC1-215ENST00000561436 DCDC2BA2VCK2 349 aa6.76□□□□□ -1.33
HERC1-215ENST00000561436 EML1O00423 815 aa6.76□□□□□ -1.33
HERC1-215ENST00000561436 PPP1R12BO60237 982 aaPredicted RBP6.76□□□□□ -1.33
HERC1-215ENST00000561436 CSB-PGBD3P0DP91 1061 aa6.76□□□□□ -1.33
HERC1-215ENST00000561436 PDIA4P13667 645 aaKnown RBP6.76□□□□□ -1.33
HERC1-215ENST00000561436 SRPK2P78362 688 aaKnown RBP6.76□□□□□ -1.33
HERC1-215ENST00000561436 PGBD3Q8N328 593 aa6.76□□□□□ -1.33
HERC1-215ENST00000561436 SERTM1A2A2V5 107 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 H7C1W4 665 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 TEAD4Q15561 434 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 NBPF1Q3BBV0 1214 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 BICDL1Q6ZP65 573 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 ZSCAN1Q8NBB4 408 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 HSH2DQ96JZ2 352 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 PRIMPOLQ96LW4 560 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 ZIC5Q96T25 663 aa6.75□□□□□ -1.33
HERC1-215ENST00000561436 ATAD2Q6PL18 1390 aa6.74□□□□□ -1.33
HERC1-215ENST00000561436 CARNS1A5YM72 827 aa6.74□□□□□ -1.33
HERC1-215ENST00000561436 BNIP3LO60238 219 aa6.74□□□□□ -1.33
HERC1-215ENST00000561436 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
HERC1-215ENST00000561436 GRIN2CQ14957 1233 aa6.74□□□□□ -1.33
HERC1-215ENST00000561436 LRRC69Q6ZNQ3 347 aa6.74□□□□□ -1.33
HERC1-215ENST00000561436 FAM200AQ8TCP9 573 aa6.74□□□□□ -1.33
HERC1-215ENST00000561436 ZCCHC2Q9C0B9 1178 aaKnown RBP6.74□□□□□ -1.33
HERC1-215ENST00000561436 PRMT3O60678 531 aa6.73□□□□□ -1.33
HERC1-215ENST00000561436 TATP17735 454 aaPredicted RBP6.73□□□□□ -1.33
HERC1-215ENST00000561436 PSMA6P60900 246 aaKnown RBP6.73□□□□□ -1.33
HERC1-215ENST00000561436 INSM1Q01101 510 aaPredicted RBP6.73□□□□□ -1.33
HERC1-215ENST00000561436 EFHC2Q5JST6 749 aa6.73□□□□□ -1.33
HERC1-215ENST00000561436 PBXIP1Q96AQ6 731 aa6.73□□□□□ -1.33
HERC1-215ENST00000561436 PHACTR1Q9C0D0 580 aa6.73□□□□□ -1.33
HERC1-215ENST00000561436 CRISPLD1Q9H336 500 aa6.73□□□□□ -1.33
HERC1-215ENST00000561436 IGF1RP08069 1367 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 M0R2N6 131 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 CD33P20138 364 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 CTBSQ01459 385 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 TMEM164Q5U3C3 297 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 ZNF280CQ8ND82 737 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 RHPN1Q8TCX5 695 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 TRERF1Q96PN7 1200 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 STRN4Q9NRL3 753 aa6.72□□□□□ -1.33
HERC1-215ENST00000561436 C2CD2LO14523 706 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 KHNYNO15037 678 aaKnown RBP6.71□□□□□ -1.34
HERC1-215ENST00000561436 MX2P20592 715 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 FAM69CQ0P6D2 419 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 ZNF385CQ66K41 422 aaPredicted RBP6.71□□□□□ -1.34
HERC1-215ENST00000561436 FOXR1Q6PIV2 292 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 LYPD4Q6UWN0 246 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 CAPN12Q6ZSI9 719 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms