RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 CHMP3Q9Y3E7 222 aa9.18□□□□□ -0.94
USP8-218ENST00000561330 TEAD4Q15561 434 aa9.17□□□□□ -0.94
USP8-218ENST00000561330 L3MBTL2Q969R5 705 aa9.17□□□□□ -0.94
USP8-218ENST00000561330 AIDAQ96BJ3 306 aa9.17□□□□□ -0.94
USP8-218ENST00000561330 PARP3Q9Y6F1 533 aa9.17□□□□□ -0.94
USP8-218ENST00000561330 SERTM1A2A2V5 107 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 F11P03951 625 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 IGFBP4P22692 258 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 MSX1P28360 303 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 NOS2P35228 1153 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 VEGFBP49765 207 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 NBPF1Q3BBV0 1214 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 RIPOR1Q6ZS17 1223 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
USP8-218ENST00000561330 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
USP8-218ENST00000561330 ZNF775Q96BV0 537 aaPredicted RBP9.16□□□□□ -0.94
USP8-218ENST00000561330 H3BM21 787 aa9.15□□□□□ -0.94
USP8-218ENST00000561330 C21orf2O43822 256 aa9.15□□□□□ -0.94
USP8-218ENST00000561330 ITGA6P23229 1130 aa9.15□□□□□ -0.94
USP8-218ENST00000561330 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
USP8-218ENST00000561330 GPAMQ9HCL2 828 aa9.15□□□□□ -0.94
USP8-218ENST00000561330 EML1O00423 815 aa9.14□□□□□ -0.95
USP8-218ENST00000561330 TATP17735 454 aaPredicted RBP9.14□□□□□ -0.95
USP8-218ENST00000561330 WEE1P30291 646 aa9.14□□□□□ -0.95
USP8-218ENST00000561330 ZDHHC3Q9NYG2 299 aa9.14□□□□□ -0.95
USP8-218ENST00000561330 H7C1W4 665 aa9.13□□□□□ -0.95
USP8-218ENST00000561330 PRMT3O60678 531 aa9.13□□□□□ -0.95
USP8-218ENST00000561330 PGBD3Q8N328 593 aa9.13□□□□□ -0.95
USP8-218ENST00000561330 STAG2Q8N3U4 1231 aa9.13□□□□□ -0.95
USP8-218ENST00000561330 CLP1Q92989 425 aaKnown RBP9.13□□□□□ -0.95
USP8-218ENST00000561330 PRIMPOLQ96LW4 560 aa9.13□□□□□ -0.95
USP8-218ENST00000561330 HIRAP54198 1017 aaPredicted RBP9.12□□□□□ -0.95
USP8-218ENST00000561330 TRIM22Q8IYM9 498 aa9.12□□□□□ -0.95
USP8-218ENST00000561330 C2orf49Q9BVC5 232 aaPredicted RBP9.12□□□□□ -0.95
USP8-218ENST00000561330 CUEDC1Q9NWM3 386 aaPredicted RBP9.12□□□□□ -0.95
USP8-218ENST00000561330 CDC14CA4D256 554 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 ATP4AP20648 1035 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 TXLNAP40222 546 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 SH3PXD2AQ5TCZ1 1133 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 VTI1AQ96AJ9 217 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 GMCL1Q96IK5 515 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 HCN4Q9Y3Q4 1203 aa9.11□□□□□ -0.95
USP8-218ENST00000561330 TMEM88BA6NKF7 163 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 FOXO3O43524 673 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 WFS1O76024 890 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
USP8-218ENST00000561330 OCLNQ16625 522 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 DBN1Q16643 649 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 ARSJQ5FYB0 599 aaPredicted RBP9.1□□□□□ -0.95
USP8-218ENST00000561330 SV2AQ7L0J3 742 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 VWA5B2Q8N398 1253 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 NANOS1Q8WY41 292 aaKnown RBP9.1□□□□□ -0.95
USP8-218ENST00000561330 IRF7Q92985 503 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 USTQ9Y2C2 406 aa9.1□□□□□ -0.95
USP8-218ENST00000561330 EFHC2Q5JST6 749 aa9.09□□□□□ -0.95
USP8-218ENST00000561330 C1orf53Q5VUE5 145 aa9.09□□□□□ -0.95
USP8-218ENST00000561330 BICDL1Q6ZP65 573 aa9.09□□□□□ -0.95
USP8-218ENST00000561330 NUCKS1Q9H1E3 243 aaKnown RBP9.09□□□□□ -0.95
USP8-218ENST00000561330 CRISPLD1Q9H336 500 aa9.09□□□□□ -0.95
USP8-218ENST00000561330 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
USP8-218ENST00000561330 LBRQ14739 615 aaKnown RBP9.08□□□□□ -0.96
USP8-218ENST00000561330 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
USP8-218ENST00000561330 RETREG2Q8NC44 543 aa9.08□□□□□ -0.96
USP8-218ENST00000561330 NGLY1Q96IV0 654 aa9.08□□□□□ -0.96
USP8-218ENST00000561330 PHACTR1Q9C0D0 580 aa9.08□□□□□ -0.96
USP8-218ENST00000561330 VSIG8P0DPA2 414 aa9.07□□□□□ -0.96
USP8-218ENST00000561330 PDE4CQ08493 712 aa9.07□□□□□ -0.96
USP8-218ENST00000561330 FKBP5Q13451 457 aaPredicted RBP9.07□□□□□ -0.96
USP8-218ENST00000561330 FOXR1Q6PIV2 292 aa9.07□□□□□ -0.96
USP8-218ENST00000561330 RHPN1Q8TCX5 695 aa9.07□□□□□ -0.96
USP8-218ENST00000561330 ZNF837Q96EG3 531 aaPredicted RBP9.07□□□□□ -0.96
USP8-218ENST00000561330 ZIC5Q96T25 663 aa9.07□□□□□ -0.96
USP8-218ENST00000561330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.07□□□□□ -0.96
USP8-218ENST00000561330 CXXC1Q9P0U4 656 aaPredicted RBP9.07□□□□□ -0.96
USP8-218ENST00000561330 SLAIN2Q9P270 581 aa9.07□□□□□ -0.96
USP8-218ENST00000561330 GPC6Q9Y625 555 aaPredicted RBP9.07□□□□□ -0.96
USP8-218ENST00000561330 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
USP8-218ENST00000561330 ERBB4Q15303 1308 aa9.06□□□□□ -0.96
USP8-218ENST00000561330 A0A1W2PNR3 127 aa9.06□□□□□ -0.96
USP8-218ENST00000561330 ALDH16A1Q8IZ83 802 aa9.06□□□□□ -0.96
USP8-218ENST00000561330 GTPBP3Q969Y2 492 aaKnown RBP9.06□□□□□ -0.96
USP8-218ENST00000561330 NEUROD4Q9HD90 331 aa9.06□□□□□ -0.96
USP8-218ENST00000561330 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
USP8-218ENST00000561330 NLRP8Q86W28 1048 aa9.05□□□□□ -0.96
USP8-218ENST00000561330 THBS1P07996 1170 aa9.04□□□□□ -0.96
USP8-218ENST00000561330 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
USP8-218ENST00000561330 GPR161Q8N6U8 529 aaKnown RBP9.04□□□□□ -0.96
USP8-218ENST00000561330 C7orf43Q8WVR3 580 aa9.04□□□□□ -0.96
USP8-218ENST00000561330 TRERF1Q96PN7 1200 aa9.04□□□□□ -0.96
USP8-218ENST00000561330 PTCD1O75127 700 aaKnown RBP9.03□□□□□ -0.96
USP8-218ENST00000561330 RTN1Q16799 776 aa9.03□□□□□ -0.96
USP8-218ENST00000561330 LRRC69Q6ZNQ3 347 aa9.03□□□□□ -0.96
USP8-218ENST00000561330 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
USP8-218ENST00000561330 SSFA2P28290 1259 aa9.02□□□□□ -0.97
USP8-218ENST00000561330 COL26A1Q96A83 441 aa9.02□□□□□ -0.97
USP8-218ENST00000561330 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms