RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	KIF16B	Q96L93	1317 aa		6.25	□□□□□ -1.41
IDH3A-208	ENST00000558602	HTATSF1	O43719	755 aa	Known RBP	6.25	□□□□□ -1.41
IDH3A-208	ENST00000558602	TSPYL4	Q9UJ04	414 aa		6.25	□□□□□ -1.41
IDH3A-208	ENST00000558602	KIAA0232	Q92628	1395 aa		6.25	□□□□□ -1.41
IDH3A-208	ENST00000558602	CENPQ	Q7L2Z9	268 aa	Predicted RBP	6.25	□□□□□ -1.41
IDH3A-208	ENST00000558602	FTSJ3	Q8IY81	847 aa	Known RBP	6.25	□□□□□ -1.41
IDH3A-208	ENST00000558602	NHSL1	Q5SYE7	1610 aa		6.25	□□□□□ -1.41
IDH3A-208	ENST00000558602	CEMIP	Q8WUJ3	1361 aa		6.24	□□□□□ -1.41
IDH3A-208	ENST00000558602	IRX5	P78411	483 aa	Predicted RBP	6.24	□□□□□ -1.41
IDH3A-208	ENST00000558602	ITPRIP	Q8IWB1	547 aa		6.24	□□□□□ -1.41
IDH3A-208	ENST00000558602	ABCA3	Q99758	1704 aa		6.24	□□□□□ -1.41
IDH3A-208	ENST00000558602	LRP5	O75197	1615 aa		6.24	□□□□□ -1.41
IDH3A-208	ENST00000558602	RGS12	O14924	1447 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	IPO8	O15397	1037 aa	Known RBP	6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	KCNQ3	O43525	872 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	MNX1	P50219	401 aa	Predicted RBP	6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	TAF7	Q15545	349 aa	Predicted RBP	6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	ZNF530	Q6P9A1	599 aa	Predicted RBP	6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	MPRIP	Q6WCQ1	1025 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	ARHGAP45	Q92619	1136 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	ZBTB40	Q9NUA8	1239 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	ZBTB7B	O15156	539 aa	Predicted RBP	6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	PLEKHO1	Q53GL0	409 aa	Predicted RBP	6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	AKAP4	Q5JQC9	854 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	G2E3	Q7L622	706 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	NLRP2	Q9NX02	1062 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	DDX19B	Q9UMR2	479 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	MEGF6	O75095	1541 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	KDM3B	Q7LBC6	1761 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	CPD	O75976	1380 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	ABCC4	O15439	1325 aa		6.23	□□□□□ -1.41
IDH3A-208	ENST00000558602	RNMT	O43148	476 aa	Known RBP	6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	MS4A1	P11836	297 aa		6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	HOXB1	P14653	301 aa	Predicted RBP	6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	SIPA1L3	O60292	1781 aa	Predicted RBP	6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	SLC34A2	O95436	690 aa		6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	AMOT	Q4VCS5	1084 aa		6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	NECTIN2	Q92692	538 aa		6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	ADAMTS7	Q9UKP4	1686 aa		6.22	□□□□□ -1.41
IDH3A-208	ENST00000558602	CSB-PGBD3	P0DP91	1061 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	RGS3	P49796	1198 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	AAMP	Q13685	434 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	ZNF687	Q8N1G0	1237 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	TSPYL2	Q9H2G4	693 aa	Predicted RBP	6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	ROBO1	Q9Y6N7	1651 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	SCN11A	Q9UI33	1791 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	EIF4A1	P60842	406 aa	Known RBP	6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	ZNF772	Q68DY9	489 aa	Predicted RBP	6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	C1orf115	Q9H7X2	142 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	PRDM11	Q9NQV5	511 aa		6.21	□□□□□ -1.42
IDH3A-208	ENST00000558602	ABCC6	O95255	1503 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	KDM6A	O15550	1401 aa	Predicted RBP	6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	CACNA1F	O60840	1977 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602		F6X3S4	739 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	CYP27B1	O15528	508 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	MAP3K13	O43283	966 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	PDE4A	P27815	886 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	C1orf141	Q5JVX7	400 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	SIRT2	Q8IXJ6	389 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	RAPGEF4	Q8WZA2	1011 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	API5	Q9BZZ5	524 aa	Known RBP	6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	ANO8	Q9HCE9	1232 aa	Predicted RBP	6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	BABAM1	Q9NWV8	329 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	PDZRN3	Q9UPQ7	1066 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	COL5A2	P05997	1499 aa	Predicted RBP	6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	PKD1L3	Q7Z443	1732 aa		6.2	□□□□□ -1.42
IDH3A-208	ENST00000558602	PRAMEF22	A3QJZ6	481 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	BTBD11	A6QL63	1104 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	PHKG2	P15735	406 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	TAT	P17735	454 aa	Predicted RBP	6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	TEF	Q10587	303 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	INTS3	Q68E01	1043 aa	Known RBP	6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	BACH2	Q9BYV9	841 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	WDR17	Q8IZU2	1322 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	HDAC1	Q13547	482 aa	Predicted RBP	6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	VARS2	Q5ST30	1063 aa	Known RBP	6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	LARP1	Q6PKG0	1096 aa	Known RBP	6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	RWDD1	Q9H446	243 aa	Predicted RBP	6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	OCEL1	Q9H607	264 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	PHAX	Q9H814	394 aa	Known RBP	6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	PTPRC	P08575	1304 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	HEG1	Q9ULI3	1381 aa		6.19	□□□□□ -1.42
IDH3A-208	ENST00000558602	OVOS2	A0A0G2JMS6	1433 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	ANXA1	P04083	346 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	EIF2S2	P20042	333 aa	Known RBP	6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	SLC39A6	Q13433	755 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	C8orf34	Q49A92	452 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	CCDC30	Q5VVM6	783 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	TOM1L2	Q6ZVM7	507 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	C3orf67	Q6ZVT6	689 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	SHANK3	Q9BYB0	1731 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	FLII	Q13045	1269 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	HDGFL1	Q5TGJ6	251 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	ANKRD13D	Q6ZTN6	518 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	SMC5	Q8IY18	1101 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	NFATC2IP	Q8NCF5	419 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	SPOCK2	Q92563	424 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	MEIS3	Q99687	375 aa		6.18	□□□□□ -1.42
IDH3A-208	ENST00000558602	STRN4	Q9NRL3	753 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms