RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 VIRMAQ69YN4 1812 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-204ENST00000558376 C16orf71Q8IYS4 520 aaPredicted RBP15.1■□□□□ 0.01
RABGGTA-204ENST00000558376 SOS1Q07889 1333 aaPredicted RBP15.1■□□□□ 0.01
RABGGTA-204ENST00000558376 CYP19A1P11511 503 aaPredicted RBP15.1■□□□□ 0.01
RABGGTA-204ENST00000558376 SLC39A6Q13433 755 aa15.1■□□□□ 0.01
RABGGTA-204ENST00000558376 AKAP4Q5JQC9 854 aa15.1■□□□□ 0.01
RABGGTA-204ENST00000558376 SLC52A2Q9HAB3 445 aa15.1■□□□□ 0.01
RABGGTA-204ENST00000558376 ZPR1O75312 459 aa15.09■□□□□ 0.01
RABGGTA-204ENST00000558376 FSTL1Q12841 308 aa15.09■□□□□ 0.01
RABGGTA-204ENST00000558376 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-204ENST00000558376 NFIXQ14938 502 aa15.09■□□□□ 0.01
RABGGTA-204ENST00000558376 KDM2BQ8NHM5 1336 aa15.09■□□□□ 0.01
RABGGTA-204ENST00000558376 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
RABGGTA-204ENST00000558376 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0.01
RABGGTA-204ENST00000558376 PRELPP51888 382 aa15.08■□□□□ 0.01
RABGGTA-204ENST00000558376 RASSF7Q02833 373 aa15.08■□□□□ 0.01
RABGGTA-204ENST00000558376 KLRG1Q96E93 195 aa15.08■□□□□ 0.01
RABGGTA-204ENST00000558376 BCL2L12Q9HB09 334 aa15.08■□□□□ 0.01
RABGGTA-204ENST00000558376 NARFQ9UHQ1 456 aa15.08■□□□□ 0
RABGGTA-204ENST00000558376 NRXN2Q9P2S2 1712 aa15.07■□□□□ 0
RABGGTA-204ENST00000558376 ZBTB1Q9Y2K1 713 aa15.07■□□□□ 0
RABGGTA-204ENST00000558376 KNSTRNQ9Y448 316 aa15.07■□□□□ 0
RABGGTA-204ENST00000558376 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
RABGGTA-204ENST00000558376 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
RABGGTA-204ENST00000558376 JMYQ8N9B5 988 aa15.06■□□□□ 0
RABGGTA-204ENST00000558376 HMOX1P09601 288 aa15.06■□□□□ 0
RABGGTA-204ENST00000558376 MRC1P22897 1456 aa15.05■□□□□ 0
RABGGTA-204ENST00000558376 DLEC1Q9Y238 1755 aa15.05■□□□□ -0
RABGGTA-204ENST00000558376 ANP32CO43423 234 aa15.05■□□□□ -0
RABGGTA-204ENST00000558376 SERPINB2P05120 415 aa15.05■□□□□ -0
RABGGTA-204ENST00000558376 COL15A1P39059 1388 aa15.04■□□□□ -0
RABGGTA-204ENST00000558376 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
RABGGTA-204ENST00000558376 COL13A1Q5TAT6 717 aaPredicted RBP15.03■□□□□ -0
RABGGTA-204ENST00000558376 C2CD5Q86YS7 1000 aa15.03■□□□□ -0
RABGGTA-204ENST00000558376 CARMIL3Q8ND23 1372 aa15.03■□□□□ -0
RABGGTA-204ENST00000558376 LMNB1P20700 586 aa15.02■□□□□ -0
RABGGTA-204ENST00000558376 CANXP27824 592 aaKnown RBP15.02■□□□□ -0
RABGGTA-204ENST00000558376 TTLL6Q8N841 843 aa15.02■□□□□ -0
RABGGTA-204ENST00000558376 SMC1BQ8NDV3 1235 aa15.02■□□□□ -0
RABGGTA-204ENST00000558376 YTHDC1Q96MU7 727 aaKnown RBP15.02■□□□□ -0
RABGGTA-204ENST00000558376 UBR2Q8IWV8 1755 aa15.02□□□□□ -0.01
RABGGTA-204ENST00000558376 GLTPD2A6NH11 291 aa15.01□□□□□ -0.01
RABGGTA-204ENST00000558376 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
RABGGTA-204ENST00000558376 ZC3H4Q9UPT8 1303 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-204ENST00000558376 ANKRD31Q8N7Z5 1873 aa15.01□□□□□ -0.01
RABGGTA-204ENST00000558376 NFKBIEO00221 500 aa15.01□□□□□ -0.01
RABGGTA-204ENST00000558376 VEGFAP15692 232 aaPredicted RBP15□□□□□ -0.01
RABGGTA-204ENST00000558376 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
RABGGTA-204ENST00000558376 BICDL1Q6ZP65 573 aa15□□□□□ -0.01
RABGGTA-204ENST00000558376 PCNTO95613 3336 aa15□□□□□ -0.01
RABGGTA-204ENST00000558376 POTECB2RU33 542 aa14.99□□□□□ -0.01
RABGGTA-204ENST00000558376 H0YIN7 160 aa14.99□□□□□ -0.01
RABGGTA-204ENST00000558376 TIAM2Q8IVF5 1701 aa14.99□□□□□ -0.01
RABGGTA-204ENST00000558376 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-204ENST00000558376 TBC1D9BQ66K14 1250 aa14.98□□□□□ -0.01
RABGGTA-204ENST00000558376 CCDC24Q8N4L8 307 aa14.98□□□□□ -0.01
RABGGTA-204ENST00000558376 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
RABGGTA-204ENST00000558376 STARD3NLO95772 234 aa14.97□□□□□ -0.01
RABGGTA-204ENST00000558376 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
RABGGTA-204ENST00000558376 ZNF496Q96IT1 587 aaPredicted RBP14.97□□□□□ -0.01
RABGGTA-204ENST00000558376 DICER1Q9UPY3 1922 aaKnown RBP14.97□□□□□ -0.01
RABGGTA-204ENST00000558376 ZNF622Q969S3 477 aaKnown RBP eCLIP14.97□□□□□ -0.01
RABGGTA-204ENST00000558376 FER1L6Q2WGJ9 1857 aa14.96□□□□□ -0.01
RABGGTA-204ENST00000558376 A0A087WZG4 1122 aa14.96□□□□□ -0.01
RABGGTA-204ENST00000558376 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-204ENST00000558376 PRKRIP1Q9H875 184 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-204ENST00000558376 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-204ENST00000558376 TBC1D2BQ9UPU7 963 aa14.96□□□□□ -0.01
RABGGTA-204ENST00000558376 COL11A2P13942 1736 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-204ENST00000558376 TTC5Q8N0Z6 440 aa14.95□□□□□ -0.02
RABGGTA-204ENST00000558376 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
RABGGTA-204ENST00000558376 SIPA1L3O60292 1781 aaPredicted RBP14.95□□□□□ -0.02
RABGGTA-204ENST00000558376 C21orf2O43822 256 aa14.95□□□□□ -0.02
RABGGTA-204ENST00000558376 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
RABGGTA-204ENST00000558376 HEG1Q9ULI3 1381 aa14.94□□□□□ -0.02
RABGGTA-204ENST00000558376 SLX4Q8IY92 1834 aa14.94□□□□□ -0.02
RABGGTA-204ENST00000558376 A1BGP04217 495 aa14.94□□□□□ -0.02
RABGGTA-204ENST00000558376 CCDC184Q52MB2 194 aa14.94□□□□□ -0.02
RABGGTA-204ENST00000558376 ZNF790Q6PG37 636 aa14.94□□□□□ -0.02
RABGGTA-204ENST00000558376 SCN7AQ01118 1682 aa14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 CAPN15O75808 1086 aa14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 CACNA1SQ13698 1873 aa14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 KCNQ3O43525 872 aa14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 PDE6BP35913 854 aa14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 TEFQ10587 303 aa14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 TNS4Q8IZW8 715 aa14.93□□□□□ -0.02
RABGGTA-204ENST00000558376 GNAT3A8MTJ3 354 aa14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 CAMTA2O94983 1202 aa14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 HSPA1AP0DMV8 641 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 HSPA1BP0DMV9 641 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 IL6STP40189 918 aaPredicted RBP14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 ERFEQ4G0M1 354 aa14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 DPY19L2Q6NUT2 758 aa14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 TEX13AQ9BXU3 409 aaPredicted RBP14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
RABGGTA-204ENST00000558376 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-204ENST00000558376 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
RABGGTA-204ENST00000558376 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms