RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 HEG1Q9ULI3 1381 aa16.4■□□□□ 0.22
CDC42BPB-202ENST00000558321 A0A0G2JLW4 131 aa16.4■□□□□ 0.22
CDC42BPB-202ENST00000558321 KCNQ3O43525 872 aa16.4■□□□□ 0.22
CDC42BPB-202ENST00000558321 NARFQ9UHQ1 456 aa16.4■□□□□ 0.22
CDC42BPB-202ENST00000558321 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-202ENST00000558321 A0A087WZG4 1122 aa16.39■□□□□ 0.21
CDC42BPB-202ENST00000558321 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
CDC42BPB-202ENST00000558321 COL15A1P39059 1388 aa16.38■□□□□ 0.21
CDC42BPB-202ENST00000558321 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-202ENST00000558321 CICQ96RK0 1608 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-202ENST00000558321 TM4SF1P30408 202 aa16.38■□□□□ 0.21
CDC42BPB-202ENST00000558321 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-202ENST00000558321 A1BGP04217 495 aa16.37■□□□□ 0.21
CDC42BPB-202ENST00000558321 DPEP1P16444 411 aa16.37■□□□□ 0.21
CDC42BPB-202ENST00000558321 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-202ENST00000558321 DDR1Q08345 913 aa16.37■□□□□ 0.21
CDC42BPB-202ENST00000558321 PLEKHF1Q96S99 279 aa16.37■□□□□ 0.21
CDC42BPB-202ENST00000558321 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-202ENST00000558321 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-202ENST00000558321 NFE2L2Q16236 605 aa16.36■□□□□ 0.21
CDC42BPB-202ENST00000558321 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
CDC42BPB-202ENST00000558321 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-202ENST00000558321 CHD4Q14839 1912 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 NFIXQ14938 502 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 BICDL1Q6ZP65 573 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 USP16Q9Y5T5 823 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 C4AP0C0L4 1744 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 C10orf71Q711Q0 1435 aa16.35■□□□□ 0.21
CDC42BPB-202ENST00000558321 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
CDC42BPB-202ENST00000558321 IL6STP40189 918 aaPredicted RBP16.34■□□□□ 0.21
CDC42BPB-202ENST00000558321 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
CDC42BPB-202ENST00000558321 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
CDC42BPB-202ENST00000558321 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
CDC42BPB-202ENST00000558321 UBR2Q8IWV8 1755 aa16.33■□□□□ 0.21
CDC42BPB-202ENST00000558321 SERPINB2P05120 415 aa16.33■□□□□ 0.2
CDC42BPB-202ENST00000558321 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
CDC42BPB-202ENST00000558321 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
CDC42BPB-202ENST00000558321 SIPA1L3O60292 1781 aaPredicted RBP16.32■□□□□ 0.2
CDC42BPB-202ENST00000558321 UTRNP46939 3433 aa16.32■□□□□ 0.2
CDC42BPB-202ENST00000558321 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
CDC42BPB-202ENST00000558321 THUMPD2Q9BTF0 503 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-202ENST00000558321 CHRNA5P30532 468 aa16.31■□□□□ 0.2
CDC42BPB-202ENST00000558321 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
CDC42BPB-202ENST00000558321 RIPK4P57078 832 aa16.31■□□□□ 0.2
CDC42BPB-202ENST00000558321 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDC42BPB-202ENST00000558321 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
CDC42BPB-202ENST00000558321 KCNA3P22001 575 aa16.3■□□□□ 0.2
CDC42BPB-202ENST00000558321 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
CDC42BPB-202ENST00000558321 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
CDC42BPB-202ENST00000558321 NPHP1O15259 732 aa16.29■□□□□ 0.2
CDC42BPB-202ENST00000558321 SETDB2Q96T68 719 aa16.29■□□□□ 0.2
CDC42BPB-202ENST00000558321 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
CDC42BPB-202ENST00000558321 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
CDC42BPB-202ENST00000558321 KIF13BQ9NQT8 1826 aa16.28■□□□□ 0.2
CDC42BPB-202ENST00000558321 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
CDC42BPB-202ENST00000558321 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.2
CDC42BPB-202ENST00000558321 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.2
CDC42BPB-202ENST00000558321 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.2
CDC42BPB-202ENST00000558321 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
CDC42BPB-202ENST00000558321 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
CDC42BPB-202ENST00000558321 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.2
CDC42BPB-202ENST00000558321 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.2
CDC42BPB-202ENST00000558321 H0YIN7 160 aa16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 EIF4A1P60842 406 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 ATP10DQ9P241 1426 aa16.26■□□□□ 0.19
CDC42BPB-202ENST00000558321 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
CDC42BPB-202ENST00000558321 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-202ENST00000558321 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
CDC42BPB-202ENST00000558321 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
CDC42BPB-202ENST00000558321 GPBP1L1Q9HC44 474 aaPredicted RBP16.25■□□□□ 0.19
CDC42BPB-202ENST00000558321 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
CDC42BPB-202ENST00000558321 CARMIL3Q8ND23 1372 aa16.25■□□□□ 0.19
CDC42BPB-202ENST00000558321 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
CDC42BPB-202ENST00000558321 CCDC24Q8N4L8 307 aa16.24■□□□□ 0.19
CDC42BPB-202ENST00000558321 PDE6BP35913 854 aa16.23■□□□□ 0.19
CDC42BPB-202ENST00000558321 C1QTNF8P60827 252 aa16.23■□□□□ 0.19
CDC42BPB-202ENST00000558321 TTLL6Q8N841 843 aa16.23■□□□□ 0.19
CDC42BPB-202ENST00000558321 CNBD1Q8NA66 436 aa16.23■□□□□ 0.19
CDC42BPB-202ENST00000558321 ZNF622Q969S3 477 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■□□□□ 10.4
CDC42BPB-202ENST00000558321 BRIP1Q9BX63 1249 aa16.23■□□□□ 0.19
CDC42BPB-202ENST00000558321 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
CDC42BPB-202ENST00000558321 MYL6BP14649 208 aa16.22■□□□□ 0.19
CDC42BPB-202ENST00000558321 ST5P78524 1137 aa16.22■□□□□ 0.19
CDC42BPB-202ENST00000558321 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
CDC42BPB-202ENST00000558321 NBPF5PQ86XG9 351 aaPredicted RBP16.22■□□□□ 0.19
CDC42BPB-202ENST00000558321 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
CDC42BPB-202ENST00000558321 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
CDC42BPB-202ENST00000558321 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.19
CDC42BPB-202ENST00000558321 NIP7Q9Y221 180 aaKnown RBP eCLIP16.21■□□□□ 0.19
CDC42BPB-202ENST00000558321 FAM177BA6PVY3 158 aa16.2■□□□□ 0.18
CDC42BPB-202ENST00000558321 EIF2S2P20042 333 aaKnown RBP16.2■□□□□ 0.18
CDC42BPB-202ENST00000558321 C9orf131Q5VYM1 1079 aa16.2■□□□□ 0.18
CDC42BPB-202ENST00000558321 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms