RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ZNF790Q6PG37 636 aa13.01□□□□□ -0.33
TPM1-210ENST00000558264 UNC5CLQ8IV45 518 aa13.01□□□□□ -0.33
TPM1-210ENST00000558264 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
TPM1-210ENST00000558264 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
TPM1-210ENST00000558264 GSE1Q14687 1217 aa13□□□□□ -0.33
TPM1-210ENST00000558264 SPG7Q9UQ90 795 aa13□□□□□ -0.33
TPM1-210ENST00000558264 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
TPM1-210ENST00000558264 DCCP43146 1447 aa13□□□□□ -0.33
TPM1-210ENST00000558264 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
TPM1-210ENST00000558264 SSH3Q8TE77 659 aa13□□□□□ -0.33
TPM1-210ENST00000558264 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
TPM1-210ENST00000558264 USP26Q9BXU7 913 aa13□□□□□ -0.33
TPM1-210ENST00000558264 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
TPM1-210ENST00000558264 CACNA1FO60840 1977 aa13□□□□□ -0.33
TPM1-210ENST00000558264 SALL3Q9BXA9 1300 aa12.99□□□□□ -0.33
TPM1-210ENST00000558264 CASC1Q6TDU7 716 aa12.99□□□□□ -0.33
TPM1-210ENST00000558264 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
TPM1-210ENST00000558264 JARID2Q92833 1246 aaPredicted RBP12.99□□□□□ -0.33
TPM1-210ENST00000558264 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
TPM1-210ENST00000558264 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 PDIA6Q15084 440 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
TPM1-210ENST00000558264 ADRA2BP18089 450 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
TPM1-210ENST00000558264 RHPN1Q8TCX5 695 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 SNX21Q969T3 373 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 OSBPL3Q9H4L5 887 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 CHMP5Q9NZZ3 219 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
TPM1-210ENST00000558264 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
TPM1-210ENST00000558264 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
TPM1-210ENST00000558264 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
TPM1-210ENST00000558264 POLA2Q14181 598 aa12.97□□□□□ -0.33
TPM1-210ENST00000558264 SLAIN2Q9P270 581 aa12.97□□□□□ -0.33
TPM1-210ENST00000558264 COL18A1P39060 1754 aa12.97□□□□□ -0.33
TPM1-210ENST00000558264 ERC2O15083 957 aa12.96□□□□□ -0.33
TPM1-210ENST00000558264 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
TPM1-210ENST00000558264 XAGE3Q8WTP9 111 aa12.96□□□□□ -0.33
TPM1-210ENST00000558264 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
TPM1-210ENST00000558264 HYPKQ9NX55 129 aa12.96□□□□□ -0.33
TPM1-210ENST00000558264 OVOS2A0A0G2JMS6 1433 aa12.96□□□□□ -0.33
TPM1-210ENST00000558264 XIRP1Q702N8 1843 aaKnown RBP12.96□□□□□ -0.33
TPM1-210ENST00000558264 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
TPM1-210ENST00000558264 ARXQ96QS3 562 aa12.96□□□□□ -0.33
TPM1-210ENST00000558264 CABP4P57796 275 aa12.96□□□□□ -0.34
TPM1-210ENST00000558264 COPS6Q7L5N1 327 aa12.96□□□□□ -0.34
TPM1-210ENST00000558264 SUCLG2Q96I99 432 aa12.96□□□□□ -0.34
TPM1-210ENST00000558264 IL25Q9H293 177 aa12.96□□□□□ -0.34
TPM1-210ENST00000558264 N4BP2Q86UW6 1770 aaPredicted RBP12.95□□□□□ -0.34
TPM1-210ENST00000558264 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
TPM1-210ENST00000558264 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
TPM1-210ENST00000558264 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
TPM1-210ENST00000558264 MYD88Q99836 296 aa12.95□□□□□ -0.34
TPM1-210ENST00000558264 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
TPM1-210ENST00000558264 ANO2Q9NQ90 1003 aa12.95□□□□□ -0.34
TPM1-210ENST00000558264 LMTK3Q96Q04 1460 aa12.95□□□□□ -0.34
TPM1-210ENST00000558264 NCOA3Q9Y6Q9 1424 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 C5P01031 1676 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 REC8O95072 547 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 IGKV5-2P06315 115 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 KLHDC4Q8TBB5 520 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
TPM1-210ENST00000558264 SIL1Q9H173 461 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
TPM1-210ENST00000558264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.94□□□□□ -0.34
TPM1-210ENST00000558264 CHMLP26374 656 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
TPM1-210ENST00000558264 GRM8O00222 908 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
TPM1-210ENST00000558264 MCM4P33991 863 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 NOL8Q76FK4 1167 aaKnown RBP12.93□□□□□ -0.34
TPM1-210ENST00000558264 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 RAB11FIP3O75154 756 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 DDIT3P35638 169 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 RABEP1Q15276 862 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 PALD1Q9ULE6 856 aa12.93□□□□□ -0.34
TPM1-210ENST00000558264 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
TPM1-210ENST00000558264 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
TPM1-210ENST00000558264 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
TPM1-210ENST00000558264 ALDH1L1O75891 902 aa12.92□□□□□ -0.34
TPM1-210ENST00000558264 PI4K2BQ8TCG2 481 aa12.92□□□□□ -0.34
TPM1-210ENST00000558264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.345e-8■■■■□ 19.9
TPM1-210ENST00000558264 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
TPM1-210ENST00000558264 SNRPA1P09661 255 aaKnown RBP12.92□□□□□ -0.34
TPM1-210ENST00000558264 LARP1Q6PKG0 1096 aaKnown RBP12.92□□□□□ -0.34
TPM1-210ENST00000558264 TNPO1Q92973 898 aaKnown RBP12.92□□□□□ -0.34
TPM1-210ENST00000558264 ADAMTS7Q9UKP4 1686 aa12.92□□□□□ -0.34
TPM1-210ENST00000558264 CPDO75976 1380 aa12.91□□□□□ -0.34
TPM1-210ENST00000558264 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
TPM1-210ENST00000558264 WDR17Q8IZU2 1322 aa12.91□□□□□ -0.34
TPM1-210ENST00000558264 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
TPM1-210ENST00000558264 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
TPM1-210ENST00000558264 NEURL1BA8MQ27 555 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms