RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 NOP53Q9NZM5 478 aaKnown RBP6.46□□□□□ -1.38
VPS13C-205ENST00000558088 C2CD2LO14523 706 aa6.45□□□□□ -1.38
VPS13C-205ENST00000558088 BACH1O14867 736 aa6.45□□□□□ -1.38
VPS13C-205ENST00000558088 EPXP11678 715 aa6.45□□□□□ -1.38
VPS13C-205ENST00000558088 ATP4AP20648 1035 aa6.45□□□□□ -1.38
VPS13C-205ENST00000558088 ADH6P28332 368 aa6.45□□□□□ -1.38
VPS13C-205ENST00000558088 EML3Q32P44 896 aa6.45□□□□□ -1.38
VPS13C-205ENST00000558088 C1orf229Q6ZS94 237 aaPredicted RBP6.45□□□□□ -1.38
VPS13C-205ENST00000558088 ZDHHC3Q9NYG2 299 aa6.45□□□□□ -1.38
VPS13C-205ENST00000558088 A0A1W2PNR3 127 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 DCDC2BA2VCK2 349 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 A6NJY4 79 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 NEURL1BA8MQ27 555 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 CDK2AP1O14519 115 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 KHNYNO15037 678 aaKnown RBP6.44□□□□□ -1.38
VPS13C-205ENST00000558088 ADAM23O75077 832 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 PROCP04070 461 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 PSME1Q06323 249 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 BICDL1Q6ZP65 573 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 CABP1Q9NZU7 370 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 PRR12Q9ULL5 1215 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 NOD1Q9Y239 953 aa6.44□□□□□ -1.38
VPS13C-205ENST00000558088 KRBA1A5PL33 1030 aa6.43□□□□□ -1.38
VPS13C-205ENST00000558088 MCM6Q14566 821 aa6.43□□□□□ -1.38
VPS13C-205ENST00000558088 FAM182BQ5T319 152 aa6.43□□□□□ -1.38
VPS13C-205ENST00000558088 BTBD6Q96KE9 485 aa6.43□□□□□ -1.38
VPS13C-205ENST00000558088 SLC4A9Q96Q91 983 aa6.43□□□□□ -1.38
VPS13C-205ENST00000558088 AVENQ9NQS1 362 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-205ENST00000558088 DNAAF2Q9NVR5 837 aaKnown RBP6.43□□□□□ -1.38
VPS13C-205ENST00000558088 K7ELQ4 463 aaPredicted RBP6.42□□□□□ -1.38
VPS13C-205ENST00000558088 LZTS3O60299 673 aaPredicted RBP6.42□□□□□ -1.38
VPS13C-205ENST00000558088 ITGB2P05107 769 aa6.42□□□□□ -1.38
VPS13C-205ENST00000558088 MAPTP10636 758 aaKnown RBP6.42□□□□□ -1.38
VPS13C-205ENST00000558088 SKIP12755 728 aa6.42□□□□□ -1.38
VPS13C-205ENST00000558088 CD33P20138 364 aa6.42□□□□□ -1.38
VPS13C-205ENST00000558088 TMEM229AB2RXF0 380 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 FAM157BP0CG42 384 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 COL8A1P27658 744 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 BAG6P46379 1132 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 TNP2Q05952 138 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 MTFR1Q15390 333 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 LINC00114Q6XXX2 140 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 CHSY3Q70JA7 882 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 NEUROD4Q9HD90 331 aa6.41□□□□□ -1.38
VPS13C-205ENST00000558088 RAD21O60216 631 aa6.4□□□□□ -1.38
VPS13C-205ENST00000558088 DGKGP49619 791 aa6.4□□□□□ -1.38
VPS13C-205ENST00000558088 GTF2IP78347 998 aa6.4□□□□□ -1.38
VPS13C-205ENST00000558088 SAMD5Q5TGI4 173 aa6.4□□□□□ -1.38
VPS13C-205ENST00000558088 NFATC2IPQ8NCF5 419 aa6.4□□□□□ -1.38
VPS13C-205ENST00000558088 IQSEC3Q9UPP2 1182 aaPredicted RBP6.4□□□□□ -1.38
VPS13C-205ENST00000558088 LAMC2Q13753 1193 aa6.39□□□□□ -1.39
VPS13C-205ENST00000558088 ZNF468Q5VIY5 522 aaPredicted RBP6.39□□□□□ -1.39
VPS13C-205ENST00000558088 ZIC5Q96T25 663 aa6.39□□□□□ -1.39
VPS13C-205ENST00000558088 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
VPS13C-205ENST00000558088 MARK1Q9P0L2 795 aa6.39□□□□□ -1.39
VPS13C-205ENST00000558088 ZNF232Q9UNY5 417 aa6.39□□□□□ -1.39
VPS13C-205ENST00000558088 PCDHGA11Q9Y5H2 935 aa6.39□□□□□ -1.39
VPS13C-205ENST00000558088 SPDYE3A6NKU9 549 aa6.38□□□□□ -1.39
VPS13C-205ENST00000558088 PIK3CDO00329 1044 aa6.38□□□□□ -1.39
VPS13C-205ENST00000558088 ALAS2P22557 587 aa6.38□□□□□ -1.39
VPS13C-205ENST00000558088 PCBP4P57723 403 aaKnown RBP6.38□□□□□ -1.39
VPS13C-205ENST00000558088 TRIM50Q86XT4 487 aa6.38□□□□□ -1.39
VPS13C-205ENST00000558088 SCHIP1Q9P0W5 487 aaPredicted RBP6.38□□□□□ -1.39
VPS13C-205ENST00000558088 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
VPS13C-205ENST00000558088 CHMP3Q9Y3E7 222 aa6.38□□□□□ -1.39
VPS13C-205ENST00000558088 PARP3Q9Y6F1 533 aa6.38□□□□□ -1.39
VPS13C-205ENST00000558088 HOXB4P17483 251 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-205ENST00000558088 NCOA4Q13772 614 aa6.37□□□□□ -1.39
VPS13C-205ENST00000558088 FCHSD1Q86WN1 690 aa6.37□□□□□ -1.39
VPS13C-205ENST00000558088 ZNF295-AS1Q8N0V1 137 aa6.37□□□□□ -1.39
VPS13C-205ENST00000558088 L3MBTL2Q969R5 705 aa6.37□□□□□ -1.39
VPS13C-205ENST00000558088 ZNF358Q9NW07 568 aa6.37□□□□□ -1.39
VPS13C-205ENST00000558088 GPC6Q9Y625 555 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-205ENST00000558088 USP17L5A8MUK1 530 aa6.36□□□□□ -1.39
VPS13C-205ENST00000558088 C1QTNF9BB2RNN3 333 aa6.36□□□□□ -1.39
VPS13C-205ENST00000558088 FURINP09958 794 aa6.36□□□□□ -1.39
VPS13C-205ENST00000558088 ATP1A2P50993 1020 aa6.36□□□□□ -1.39
VPS13C-205ENST00000558088 NEUROD1Q13562 356 aa6.36□□□□□ -1.39
VPS13C-205ENST00000558088 TEAD4Q15561 434 aa6.36□□□□□ -1.39
VPS13C-205ENST00000558088 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS13C-205ENST00000558088 USP3Q9Y6I4 520 aa6.36□□□□□ -1.39
VPS13C-205ENST00000558088 NOS2P35228 1153 aa6.35□□□□□ -1.39
VPS13C-205ENST00000558088 TXLNAP40222 546 aa6.35□□□□□ -1.39
VPS13C-205ENST00000558088 LRRC69Q6ZNQ3 347 aa6.35□□□□□ -1.39
VPS13C-205ENST00000558088 CD163Q86VB7 1156 aa6.35□□□□□ -1.39
VPS13C-205ENST00000558088 SLC9A9Q8IVB4 645 aa6.35□□□□□ -1.39
VPS13C-205ENST00000558088 ALG2Q9H553 416 aa6.35□□□□□ -1.39
VPS13C-205ENST00000558088 RBM19Q9Y4C8 960 aaKnown RBP6.35□□□□□ -1.39
VPS13C-205ENST00000558088 ELOA3CA0A087WX78 387 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-205ENST00000558088 SERTM1A2A2V5 107 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 ELOA3DA6NLF2 546 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-205ENST00000558088 EFSO43281 561 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 SPATA31C1P0DKV0 1188 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 ELOA3BQ3SY89 546 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 PRRT3Q5FWE3 981 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 SYT9Q86SS6 491 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 DEPDC4Q8N2C3 294 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 ELOA3Q8NG57 546 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 RHPN1Q8TCX5 695 aa6.34□□□□□ -1.39
VPS13C-205ENST00000558088 PLVAPQ9BX97 442 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms