RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
NEK9-210ENST00000557026 AMPD3Q01432 767 aa13.98□□□□□ -0.17
NEK9-210ENST00000557026 PDILTQ8N807 584 aa13.98□□□□□ -0.17
NEK9-210ENST00000557026 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
NEK9-210ENST00000557026 OGFOD1Q8N543 542 aa13.97□□□□□ -0.17
NEK9-210ENST00000557026 SIL1Q9H173 461 aa13.97□□□□□ -0.17
NEK9-210ENST00000557026 RALGAPBQ86X10 1494 aa13.97□□□□□ -0.17
NEK9-210ENST00000557026 C6orf229H3BNL8 230 aa13.97□□□□□ -0.17
NEK9-210ENST00000557026 CATIPQ7Z7H3 387 aa13.97□□□□□ -0.17
NEK9-210ENST00000557026 LARP1BQ659C4 914 aaKnown RBP13.97□□□□□ -0.17
NEK9-210ENST00000557026 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
NEK9-210ENST00000557026 CRNKL1Q9BZJ0 848 aaKnown RBP13.97□□□□□ -0.17
NEK9-210ENST00000557026 TSPY26PQ9H489 355 aa13.97□□□□□ -0.17
NEK9-210ENST00000557026 ALDH1L1O75891 902 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
NEK9-210ENST00000557026 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 ATP2B1P20020 1258 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
NEK9-210ENST00000557026 FEZ1Q99689 392 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 MYD88Q99836 296 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 ME1P48163 572 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 HMG20BQ9P0W2 317 aa13.96□□□□□ -0.17
NEK9-210ENST00000557026 DDB1Q16531 1140 aa13.96□□□□□ -0.18
NEK9-210ENST00000557026 NLRP3Q96P20 1036 aa13.96□□□□□ -0.18
NEK9-210ENST00000557026 PTCD1O75127 700 aaKnown RBP13.95□□□□□ -0.18
NEK9-210ENST00000557026 FERMT1Q9BQL6 677 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 ANKRD2Q9GZV1 360 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 TBX22Q9Y458 520 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 WDR97A6NE52 1622 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 NBPF5PQ86XG9 351 aaPredicted RBP13.95□□□□□ -0.18
NEK9-210ENST00000557026 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 ZHX3Q9H4I2 956 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 RIMS2Q9UQ26 1411 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 APBB1IPQ7Z5R6 666 aaPredicted RBP13.95□□□□□ -0.18
NEK9-210ENST00000557026 TANGO6Q9C0B7 1094 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 GOLGA6L10A6NI86 522 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 PCF11O94913 1555 aaKnown RBP13.95□□□□□ -0.18
NEK9-210ENST00000557026 ZNF710Q8N1W2 664 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 LRRC45Q96CN5 670 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 BABAM1Q9NWV8 329 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 NOS1P29475 1434 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
NEK9-210ENST00000557026 PDE6BP35913 854 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 TNNI2P48788 182 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 EVI5LQ96CN4 794 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 MX1P20591 662 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 ZNF804AQ7Z570 1209 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 CTAGE5O15320 804 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 PAXIP1Q6ZW49 1069 aaPredicted RBP13.94□□□□□ -0.18
NEK9-210ENST00000557026 ZNF592Q92610 1267 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 KIF2AO00139 706 aaPredicted RBP13.94□□□□□ -0.18
NEK9-210ENST00000557026 SERPINC1P01008 464 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 ERMNQ8TAM6 284 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 NAP1L4Q99733 375 aaKnown RBP13.94□□□□□ -0.18
NEK9-210ENST00000557026 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 ZNF213O14771 459 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 FKBP15Q5T1M5 1219 aa13.94□□□□□ -0.18
NEK9-210ENST00000557026 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 K7ELQ4 463 aaPredicted RBP13.93□□□□□ -0.18
NEK9-210ENST00000557026 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
NEK9-210ENST00000557026 FOXD4L6Q3SYB3 417 aaPredicted RBP13.93□□□□□ -0.18
NEK9-210ENST00000557026 FOXD4L3Q6VB84 417 aaPredicted RBP13.93□□□□□ -0.18
NEK9-210ENST00000557026 SCAND2PQ9GZW5 306 aaPredicted RBP13.93□□□□□ -0.18
NEK9-210ENST00000557026 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 CCDC194A0A1B0GVG4 234 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 ERLIN1O75477 346 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 TPTE2Q6XPS3 522 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 JDP2Q8WYK2 163 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 CNNM2Q9H8M5 875 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 EPB41L2O43491 1005 aaKnown RBP13.93□□□□□ -0.18
NEK9-210ENST00000557026 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
NEK9-210ENST00000557026 SLFN5Q08AF3 891 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 KANK3Q6NY19 840 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 CCDC191Q8NCU4 936 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 TAF4BQ92750 862 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 TNMDQ9H2S6 317 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 STK32BQ9NY57 414 aa13.93□□□□□ -0.18
NEK9-210ENST00000557026 IL2RBP14784 551 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 CCDC181Q5TID7 509 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 TSR2Q969E8 191 aaKnown RBP13.92□□□□□ -0.18
NEK9-210ENST00000557026 CCDC148Q8NFR7 591 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 DDX12PQ92771 950 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 CCDC172P0C7W6 258 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 LMOD1P29536 600 aaPredicted RBP13.92□□□□□ -0.18
NEK9-210ENST00000557026 SUPT20HQ8NEM7 779 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 SLC12A7Q9Y666 1083 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 PRKCSHP14314 528 aaPredicted RBP13.92□□□□□ -0.18
NEK9-210ENST00000557026 GNAT2P19087 354 aa13.92□□□□□ -0.18
NEK9-210ENST00000557026 JAKMIP1Q96N16 626 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms